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1f62be4e1aec00a82b4c66209d486ebda695554a
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11 Commits
Author SHA1 Message Date
Nate Coraor 8fadc6392b Rename universe_wsgi.ini -> galaxy.ini everywhere. 2014-09-15 16:43:51 -04:00
Nate Coraor 1b6f2bf27a Fix check_galaxy for recent framework changes. 2012-11-27 15:57:05 -05:00
Nate Coraor 624fa70cbc Remove contrib/multiprocess.sh since run.sh can run all of the processes itself now. 2012-08-08 11:12:42 -04:00
Nate Coraor f866c529a8 Provide a modified check_galaxy.py that is suitable for use with nagios. 2012-05-26 15:00:36 -04:00
Greg Von Kuster e00f7d04fc Add script for merging specific local Galaxy config universe_wsgi.ini.cri with default Galaxy universe_wsgi.ini.sample contributed by Anne Pajon. 2012-03-28 10:58:19 -04:00
Nate Coraor 9b5e9992f0 Fedora(/RHEL/SL/CentOS) init script, thanks Brad Chapman! 2011-12-05 14:55:00 -05:00
Nate Coraor e8ab977d8b Add the "Galaxy ls" script to contrib/. Thanks, Simon McGowan. 2011-09-06 11:51:01 -04:00
Greg Von Kuster 3eacfa47ea Add Assaf Gordon's collect_job_timings.sh script. 
This shell script produces the report, combining information from SGE's QACCT with the galaxy job/dataset information.

The output contains:
job, user, tool name, dbkey, total input size in bytes, waiting time in SGE queue, actual SGE executiong running time, and some other tidbits.

This allows finding how much running time each user had on the cluster,
how much time each tool/user spend idly waiting,
and some possible correlations between tools, dbkeys, input size and running time.

The script is tightly coupled with SGE and PostgreSQL, but can probably be adapted to PBS/MySQL.
 2011-07-21 13:55:24 -04:00
Florent Angly a26e479b86 MacOS X daemon launcher: 
* fixed bad XML
  * better default parameters
  * improved documentation
 2010-12-13 13:54:22 +10:00
Nate Coraor d8281a6e77 add multiprocess.sh example script for running multiple galaxy processes. instructions coming later. 2010-05-20 17:00:12 -04:00
Nate Coraor a51ce47c40 Add contributed Debian init script and OS X LaunchDaemon plist from James Casbon, and my Solaris SMF manifest. 2009-10-30 12:41:17 -04:00