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- Performance of indexers much improved.

Browse Source 
- Indexing for tracks done in background with a visual treatment done to Trackster

- DB builds can be uploaded by a user (chromInfo/len extension).

- TODO: Add ability to change the dbkey of a dataset to any arbitrary string value.
This commit is contained in:
Ian Schenck
2009-04-23 13:46:52 -04:00
parent 20ae1859f3
commit feda672ffa
23 changed files with 245 additions and 55 deletions
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datatypes_conf.xml.sample
+4 -1
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@@ -8,6 +8,9 @@
<converter file="interval_to_coverage.xml" target_datatype="coverage"/>
</datatype>
<datatype extension="binseq.zip" type="galaxy.datatypes.images:Binseq" mimetype="application/zip" display_in_upload="true"/>
<datatype extension="len" type="galaxy.datatypes.chrominfo:ChromInfo" display_in_upload="true">
<!-- no converters yet -->
</datatype>
<datatype extension="coverage" type="galaxy.datatypes.coverage:LastzCoverage" display_in_upload="true">
<indexer file="coverage.xml" />
</datatype>
@@ -31,7 +34,7 @@
<datatype extension="html" type="galaxy.datatypes.images:Html" mimetype="text/html"/>
<datatype extension="interval" type="galaxy.datatypes.interval:Interval" display_in_upload="true">
<converter file="interval_to_bed_converter.xml" target_datatype="bed"/>
<indexer file="interval.xml" />
<indexer file="interval_awk.xml" />
</datatype>
<datatype extension="jpg" type="galaxy.datatypes.images:Image" mimetype="image/jpeg"/>
<datatype extension="laj" type="galaxy.datatypes.images:Laj"/>