From e31f73041d653c23776b28c98786b2779bbd5afb Mon Sep 17 00:00:00 2001 From: Greg Von Kuster Date: Wed, 14 May 2014 15:07:30 -0400 Subject: [PATCH] Fix for tool migration manager to use self.app instead of trans.app. --- lib/tool_shed/galaxy_install/tool_migration_manager.py | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/lib/tool_shed/galaxy_install/tool_migration_manager.py b/lib/tool_shed/galaxy_install/tool_migration_manager.py index b06739092f4..49bd55d5729 100644 --- a/lib/tool_shed/galaxy_install/tool_migration_manager.py +++ b/lib/tool_shed/galaxy_install/tool_migration_manager.py @@ -470,7 +470,7 @@ class ToolMigrationManager( object ): if index is not None: tool_dependency = tool_dependencies[ index ] tool_dependency, proceed_with_install, action_elem_tuples = \ - tag_manager.process_tag_set( trans.app, + tag_manager.process_tag_set( self.app, tool_shed_repository, tool_dependency, elem, @@ -480,7 +480,7 @@ class ToolMigrationManager( object ): tool_dependency_db_records=tool_dependencies ) if proceed_with_install: try: - tool_dependency = install_manager.install_package( trans.app, + tool_dependency = install_manager.install_package( self.app, elem, tool_shed_repository, tool_dependencies=tool_dependencies, @@ -493,7 +493,7 @@ class ToolMigrationManager( object ): # Since there was an installation error, update the tool dependency status to Error. The # remove_installation_path option must be left False here. tool_dependency = \ - tool_dependency_util.handle_tool_dependency_installation_error( trans.app, + tool_dependency_util.handle_tool_dependency_installation_error( self.app, tool_dependency, error_message, remove_installation_path=False )