diff --git a/lib/galaxy/datatypes/metadata.py b/lib/galaxy/datatypes/metadata.py index fe2c3a5aff3..4efa692dc8c 100644 --- a/lib/galaxy/datatypes/metadata.py +++ b/lib/galaxy/datatypes/metadata.py @@ -772,10 +772,10 @@ class JobExternalOutputMetadataWrapper( object ): #return command required to build fd, fp = tempfile.mkstemp( suffix='.py', dir = tmp_dir, prefix = "set_metadata_" ) metadata_script_file = abspath( fp ) - os.fdopen( fd, 'w' ).write( 'from galaxy_utils.metadata.set_metadata import set_metadata; set_metadata()' ) + os.fdopen( fd, 'w' ).write( 'from galaxy.metadata.set_metadata import set_metadata; set_metadata()' ) return "python %s %s" % ( metadata_script_file, args ) else: - # return args to galaxy_utils.metadata.set_metadata required to build + # return args to galaxy.metadata.set_metadata required to build return args def external_metadata_set_successfully( self, dataset, sa_session ): diff --git a/lib/galaxy/datatypes/registry.py b/lib/galaxy/datatypes/registry.py index 10514bf6ac2..1f362bbd922 100644 --- a/lib/galaxy/datatypes/registry.py +++ b/lib/galaxy/datatypes/registry.py @@ -652,7 +652,7 @@ class Registry( object ): - from galaxy_utils.metadata.set_metadata import set_metadata; set_metadata() + from galaxy.metadata.set_metadata import set_metadata; set_metadata() """ diff --git a/lib/galaxy_utils/metadata/__init__.py b/lib/galaxy/metadata/__init__.py similarity index 100% rename from lib/galaxy_utils/metadata/__init__.py rename to lib/galaxy/metadata/__init__.py diff --git a/lib/galaxy_utils/metadata/set_metadata.py b/lib/galaxy/metadata/set_metadata.py similarity index 97% rename from lib/galaxy_utils/metadata/set_metadata.py rename to lib/galaxy/metadata/set_metadata.py index e5741a9bfb0..0ffcb35d92a 100644 --- a/lib/galaxy_utils/metadata/set_metadata.py +++ b/lib/galaxy/metadata/set_metadata.py @@ -33,10 +33,6 @@ import galaxy.model.mapping # need to load this before we unpickle, in order to galaxy.model.Job() # this looks REAL stupid, but it is REQUIRED in order for SA to insert parameters into the classes defined by the mappers --> it appears that instantiating ANY mapper'ed class would suffice here from galaxy.util import stringify_dictionary_keys from sqlalchemy.orm import clear_mappers -from galaxy.objectstore import build_object_store_from_config -from galaxy import config -import ConfigParser -from galaxy.util.properties import load_app_properties def set_meta_with_tool_provided( dataset_instance, file_dict, set_meta_kwds ):