From f3aee70c9547c349061cbf22760d604f5f30c821 Mon Sep 17 00:00:00 2001
From: John Chilton <jmchilton@gmail.com>
Date: Thu, 13 Apr 2017 22:51:46 -0400
Subject: [PATCH] More careful inspection of fixes for MAF tools requiring
 Galaxy.

Add two tools that required the hack, and remove one tool that doesn't seem to require it. Tracked in comment on #3934.
---
 lib/galaxy/tools/__init__.py | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

diff --git a/lib/galaxy/tools/__init__.py b/lib/galaxy/tools/__init__.py
index 1b256779831..405343be7cd 100755
--- a/lib/galaxy/tools/__init__.py
+++ b/lib/galaxy/tools/__init__.py
@@ -115,12 +115,13 @@ GALAXY_LIB_TOOLS_UNVERSIONED = [
     "GeneBed_Maf_Fasta2",
     "maf_stats1",
     "Interval2Maf1",
+    "Interval2Maf_pairwise1",
     "MAF_To_Interval1",
     "MAF_filter",
     "MAF_To_Fasta1",
     "MAF_Reverse_Complement_1",
     "MAF_split_blocks_by_species1",
-    "maf_limit_size1",
+    "MAF_Limit_To_Species1",
     "maf_by_block_number1",
     "wiggle2simple1",
     # Converters