diff --git a/client/src/mvc/library/library-folder-view.js b/client/src/mvc/library/library-folder-view.js
index 961374b8041..2a9c8719504 100644
--- a/client/src/mvc/library/library-folder-view.js
+++ b/client/src/mvc/library/library-folder-view.js
@@ -66,7 +66,7 @@ var FolderView = Backbone.View.extend({
             is_admin = Galaxy.user.isAdmin();
         }
         var template = this.templateFolderPermissions();
-        this.$el.html(template({ folder: this.model, is_admin: is_admin }));
+        this.$el.html(template({ folder: this.model, is_admin: is_admin, root_path: getAppRoot() }));
 
         var self = this;
         $.get(`${getAppRoot()}api/folders/${self.id}/permissions?scope=current`)
@@ -204,7 +204,7 @@ var FolderView = Backbone.View.extend({
         return _.template(
             `<div class="library_style_container">
                 <div>
-                    <a href="/library/folders/<%= folder.get("parent_id") %>">
+                    <a href="<%- root_path %>library/folders/<%= folder.get("parent_id") %>">
                         <button data-toggle="tooltip" data-placement="top" title="Go back to the parent folder"
                             class="btn btn-secondary primary-button" type="button">
                             <span class="fa fa-caret-left fa-lg"/>
diff --git a/client/src/mvc/library/library-libraryrow-view.js b/client/src/mvc/library/library-libraryrow-view.js
index 279bb590d0a..f405f6aa07d 100644
--- a/client/src/mvc/library/library-libraryrow-view.js
+++ b/client/src/mvc/library/library-libraryrow-view.js
@@ -4,6 +4,7 @@ import Backbone from "backbone";
 import { Toast } from "ui/toast";
 import { getGalaxyInstance } from "app";
 import { linkifyHtmlElements } from "mvc/library/library-util";
+import { getAppRoot } from "onload/loadConfig";
 
 // galaxy library row view
 var LibraryRowView = Backbone.View.extend({
@@ -44,6 +45,7 @@ var LibraryRowView = Backbone.View.extend({
                 library: library,
                 button_config: this.element_visibility_config,
                 edit_mode: this.edit_mode,
+                root_path: getAppRoot(),
             })
         );
         this.$el.show();
@@ -243,7 +245,7 @@ var LibraryRowView = Backbone.View.extend({
                         <td style="color:grey;"><%- library.get("name") %></td>
                     <% } else { %>
                         <td>
-                            <a href="folders/<%- library.get("root_folder_id") %>"><%- library.get("name") %></a>
+                            <a href="<%- root_path %>library/folders/<%- library.get("root_folder_id") %>"><%- library.get("name") %></a>
                         </td>
                     <% } %>
                     <% if(library.get("description")) { %>