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Add a --dev-wheels arg to common_startup.sh (called by run_tests.sh by

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default) that will install things in dev-requirements.txt.
This commit is contained in:
Nate Coraor
2015-10-26 14:07:00 -04:00
parent ef08ef4ead
commit d90ba82e92
4 changed files with 14 additions and 6 deletions
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scripts/common_startup.sh
+11 -4
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@@ -1,13 +1,14 @@
#!/bin/bash
set -e
# explicitly attempt to fetch eggs before running
DEV_WHEELS=0
FETCH_WHEELS=1
SET_VENV=1
COPY_SAMPLE_FILES=1
for arg in "$@"; do
[ "$arg" = "--skip-eggs" ] && FETCH_WHEELS=0
[ "$arg" = "--skip-wheels" ] && FETCH_WHEELS=0
[ "$arg" = "--dev-wheels" ] && DEV_WHEELS=1
[ "$arg" = "--skip-venv" ] && SET_VENV=0
[ "$arg" = "--stop-daemon" ] && FETCH_WHEELS=0
[ "$arg" = "--skip-samples" ] && COPY_SAMPLE_FILES=0
@@ -97,14 +98,20 @@ if [ -z "$VIRTUAL_ENV" ]; then
fi
: ${GALAXY_WHEELS_INDEX_URL:="https://wheels.galaxyproject.org/simple"}
if [ $FETCH_WHEELS -eq 1 ]; then
# Because it's a virtualenv, we assume $PYTHONPATH is unnecessary for
# anything in the venv to work correctly, and having it set can cause
# problems when there are conflicts with Galaxy's dependencies outside the
# venv (e.g. virtualenv-burrito's pip and six)
unset PYTHONPATH
pip install --pre --no-index --find-links https://wheels.galaxyproject.org/simple/pip --upgrade pip
pip install -r requirements.txt --index-url https://wheels.galaxyproject.org/simple/
pip install --pre --no-index --find-links ${GALAXY_WHEELS_INDEX_URL}/pip --upgrade pip
pip install -r requirements.txt --index-url ${GALAXY_WHEELS_INDEX_URL}
GALAXY_CONDITIONAL_DEPENDENCIES=`PYTHONPATH=lib python -c "import galaxy.dependencies; print '\n'.join(galaxy.dependencies.optional('$GALAXY_CONFIG_FILE'))"`
[ -z "$GALAXY_CONDITIONAL_DEPENDENCIES" ] || echo "$GALAXY_CONDITIONAL_DEPENDENCIES" | pip install -r /dev/stdin --index-url https://wheels.galaxyproject.org/simple/
[ -z "$GALAXY_CONDITIONAL_DEPENDENCIES" ] || echo "$GALAXY_CONDITIONAL_DEPENDENCIES" | pip install -r /dev/stdin --index-url ${GALAXY_WHEELS_INDEX_URL}
fi
if [ $FETCH_WHEELS -eq 1 -a $DEV_WHEELS -eq 1 ]; then
dev_requirements='./lib/galaxy/dependencies/dev-requirements.txt'
[ -f $dev_requirements ] && pip install -r $dev_requirements --index-url ${GALAXY_WHEELS_INDEX_URL}
fi