From c521decf328a7d256b2f17a8fdf4d2fa5d2c0b8e Mon Sep 17 00:00:00 2001
From: Dannon Baker <dannon.baker@gmail.com>
Date: Tue, 9 Apr 2019 07:24:05 -0400
Subject: [PATCH] Specify profile and look for exit codes for genomespace tool
 -- warnings cause failures otherwise

---
 tools/genomespace/genomespace_exporter.xml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/tools/genomespace/genomespace_exporter.xml b/tools/genomespace/genomespace_exporter.xml
index 70b1d794062..392d3eef55c 100644
--- a/tools/genomespace/genomespace_exporter.xml
+++ b/tools/genomespace/genomespace_exporter.xml
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
-<tool name="GenomeSpace Exporter" id="genomespace_exporter" require_login="True" version="0.0.6">
+<tool name="GenomeSpace Exporter" id="genomespace_exporter" require_login="True" version="0.0.7" profile="16.04">
     <description> - send data to GenomeSpace</description>
     <environment_variables>
         <environment_variable name="GS_TOKEN">
@@ -8,7 +8,7 @@
             $token
         </environment_variable>
     </environment_variables>
-    <command>python $__tool_directory__/genomespace_exporter.py
+    <command detect_errors="exit_code">python $__tool_directory__/genomespace_exporter.py
         #set $target_folder = $genomespace_browser.split('^')[0]
         #assert $target_folder, Exception('You must select a valid target folder.')