From 5ff6be93ed074485a60e567309247e9dbf02db09 Mon Sep 17 00:00:00 2001 From: mvdbeek Date: Wed, 14 Feb 2018 14:10:18 +0100 Subject: [PATCH] Use profile="18.01" for BamNative converters This is because samtools writes to stderr when sorting/merging large files. Part of https://github.com/galaxyproject/galaxy/issues/5496#issuecomment-365458089. --- lib/galaxy/datatypes/converters/bam_native_to_bam_converter.xml | 2 +- lib/galaxy/datatypes/converters/sam_to_bam_native.xml | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/lib/galaxy/datatypes/converters/bam_native_to_bam_converter.xml b/lib/galaxy/datatypes/converters/bam_native_to_bam_converter.xml index 8ac1dd7b633..ea5bf341bb5 100644 --- a/lib/galaxy/datatypes/converters/bam_native_to_bam_converter.xml +++ b/lib/galaxy/datatypes/converters/bam_native_to_bam_converter.xml @@ -1,4 +1,4 @@ -