From bdb4ec450503719401e8042bb12552b42984b687 Mon Sep 17 00:00:00 2001
From: Ramkrishna Chakrabarty <rc@bx.psu.edu>
Date: Wed, 2 Mar 2011 09:40:10 -0500
Subject: [PATCH] Fix for vcf_extract tool test

---
 tools/vcf_tools/extract.xml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tools/vcf_tools/extract.xml b/tools/vcf_tools/extract.xml
index 2450f1a38ed..81e45369bcb 100644
--- a/tools/vcf_tools/extract.xml
+++ b/tools/vcf_tools/extract.xml
@@ -40,7 +40,7 @@
 	  <param name="keep_info" value='' />
 	  <param name="discard_info" value='' />
 	  <param name="pass_filter" value='true' />      
-      <output name="output" file="test_extract_pass_filter_quality_9_DP_2000_lt.vcf" ftype="vcf" />
+      <output name="output" file="test_extract_pass_filter_quality_9_DP_2000_lt.vcf" lines_diff="6" ftype="vcf" />
     </test>
     <test>
       <param name="input1" value="test.small.vcf" ftype="vcf" />