From bda6409803211101f07bb64ae35a883626b2ec87 Mon Sep 17 00:00:00 2001 From: Jianbin He Date: Thu, 27 Sep 2007 19:53:55 +0000 Subject: [PATCH] specify the input ftype for this test --- test/functional/test_3E_Filter.py | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/test/functional/test_3E_Filter.py b/test/functional/test_3E_Filter.py index 8ec2e439345..4af56abb738 100644 --- a/test/functional/test_3E_Filter.py +++ b/test/functional/test_3E_Filter.py @@ -36,13 +36,13 @@ class FilterTests(TwillTestCase): """3E_Filter: Sort on column one""" self.run_tool("sort1", input="7.bed", column="1", order="ASC", style="alpha") self.wait() - self.check_data('sc_3E_sort.bed') + self.check_data('sc_3E_sort.bed', hid=3) def test_31_select(self): """3E_Filter: Select on the pattern AY143171""" self.run_tool("Grep1", input="7.bed", invert="false", pattern="AY143171") self.wait() - self.check_data('sc_3E_select.bed') + self.check_data('sc_3E_select.bed', hid=4) # def test_40_knownToEnsembl(self): # """3E_Filter: Get UCSC knownToEnsembl""" @@ -59,8 +59,8 @@ class FilterTests(TwillTestCase): def test_40_upload(self): """3E_Filter: Get UCSC knownToEnsembl""" - self.upload_file('8.bed') - self.check_data('sc_3E_knownToEnsembl.bed') + self.upload_file('8.bed', ftype='bed') + self.check_data('sc_3E_knownToEnsembl.bed', hid=5) def test_51_join1(self): """3E_Filter: Join UCSC knowntoEnsembl to UCSC knowngenes"""