diff --git a/tools/interactive/interactivetool_climate_notebook.xml b/tools/interactive/interactivetool_climate_notebook.xml index 2f7c989bdb1..77f86162848 100644 --- a/tools/interactive/interactivetool_climate_notebook.xml +++ b/tools/interactive/interactivetool_climate_notebook.xml @@ -29,6 +29,7 @@ ## change into the directory where the notebooks are located cd ./jupyter/ && + export HOME=/home/jovyan/ && export PATH=/home/jovyan/.local/bin:\$PATH && #if $mode.mode_select == 'scratch': @@ -95,12 +96,12 @@ You can import data into the notebook via a predefined `get()` function and write results back to Galaxy with a `put()` function. - The Climate version of the Jupyter Notebook offers a lot of preinstalled tools for climate science. The list of packages is based on what is available + The Climate version of the Jupyter Notebook offers a lot of preinstalled tools for climate science. The list of packages is based on what is available on the [Pangeo](http://pangeo.io/) platform and [Pangeo stacks](https://pangeo-data.github.io/pangeo-stacks/). - **Core scipy packages**: numpy, scipy, matplotlib, pandas, xarray, sparse and sympy - **Data science**: scikit-image, scikit-learn, dask-ml, tensorflow, keras, pytorch-cpu, dask_labextension - - **Visualization**: holoviews, panel, geoviews, hvplot, geoviews, datashader, seaborn, altair, descartes, folium, vega, + - **Visualization**: holoviews, panel, geoviews, hvplot, geoviews, datashader, seaborn, altair, descartes, folium, vega, vega_datasets, palettable, cmocean,plotly, psy-maps, psy-reg, psyplot, psyplot-gui, psy-maps, psy-reg, geopy, branca - **Geospatial**: iris, cartopy, basemap, basemap-data-hires, geopandas, rasterio, netcdf4, erddapy, pydap, h5py, h5netcdf, regionmask and rio-cogeo diff --git a/tools/interactive/interactivetool_ethercalc.xml b/tools/interactive/interactivetool_ethercalc.xml index 88676c1e997..3b8f1c2d37d 100644 --- a/tools/interactive/interactivetool_ethercalc.xml +++ b/tools/interactive/interactivetool_ethercalc.xml @@ -8,7 +8,9 @@ -