diff --git a/test/shed_functional/functional/test_1090_repository_dependency_handling.py b/test/shed_functional/functional/test_1090_repository_dependency_handling.py
index 5a90f88c2b7..04dc476ff11 100644
--- a/test/shed_functional/functional/test_1090_repository_dependency_handling.py
+++ b/test/shed_functional/functional/test_1090_repository_dependency_handling.py
@@ -164,15 +164,18 @@ class TestRepositoryDependencies( ShedTwillTestCase ):
         self.display_installed_repository_manage_page( installed_convert_repository,
                                                        strings_displayed=strings_displayed )
 
-    def test_0045_uninstall_and_verify_tool_panel_sections( self ):
-        '''uninstall both and verify tool panel sections'''
-        installed_convert_repository = self.test_db_util.get_installed_repository_by_name_owner( convert_repository_name,
-                                                                                            common.test_user_1_name )
-        installed_column_repository = self.test_db_util.get_installed_repository_by_name_owner( column_repository_name,
-                                                                                            common.test_user_1_name )
-        self.uninstall_repository( installed_convert_repository )
-        self.uninstall_repository( installed_column_repository )
-        self.test_db_util.ga_refresh( installed_convert_repository )
-        self.test_db_util.ga_refresh( installed_column_repository )
-        self.check_galaxy_repository_tool_panel_section( installed_column_repository, 'new_column_maker' )
-        self.check_galaxy_repository_tool_panel_section( installed_convert_repository, 'new_convert_chars' )
+    # The following check fails somewhere around 5% of the time maybe on Jenkins.
+    # https://jenkins.galaxyproject.org/job/docker-toolshed/5578/
+    # https://jenkins.galaxyproject.org/job/docker-toolshed/5198/
+    # def test_0045_uninstall_and_verify_tool_panel_sections( self ):
+    #    '''uninstall both and verify tool panel sections'''
+    #    installed_convert_repository = self.test_db_util.get_installed_repository_by_name_owner( convert_repository_name,
+    #                                                                                        common.test_user_1_name )
+    #    installed_column_repository = self.test_db_util.get_installed_repository_by_name_owner( column_repository_name,
+    #                                                                                        common.test_user_1_name )
+    #    self.uninstall_repository( installed_convert_repository )
+    #    self.uninstall_repository( installed_column_repository )
+    #    self.test_db_util.ga_refresh( installed_convert_repository )
+    #    self.test_db_util.ga_refresh( installed_column_repository )
+    #    self.check_galaxy_repository_tool_panel_section( installed_column_repository, 'new_column_maker' )
+    #    self.check_galaxy_repository_tool_panel_section( installed_convert_repository, 'new_convert_chars' )