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Fix E127 errors introduced by previous commit

Browse Source 
using:
```
autopep8 -i -r --exclude $(sed -e 's|^|./|' -e 's|/$||' .ci/flake8_blacklist.txt | paste -sd,) --select E127 .
```
This commit is contained in:
Nicola Soranzo
2017-08-17 11:35:39 +01:00
committed by Nicola Soranzo
parent 21b44bf348
commit a353b2e88f
417 changed files with 14946 additions and 14946 deletions
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tools/data_source/data_source.py
+5 -5
View File
@@ -55,9 +55,9 @@ def __main__():
enhanced_handling = False
job_params = dict(param_dict=params)
job_params['output_data'] = [dict(out_data_name='output',
ext='data',
file_name=filename,
extra_files_path=None)]
ext='data',
file_name=filename,
extra_files_path=None)]
job_params['job_config'] = dict(GALAXY_ROOT_DIR=GALAXY_ROOT_DIR, GALAXY_DATATYPES_CONF_FILE=GALAXY_DATATYPES_CONF_FILE, TOOL_PROVIDED_JOB_METADATA_FILE=TOOL_PROVIDED_JOB_METADATA_FILE)
else:
enhanced_handling = True
@@ -109,8 +109,8 @@ def __main__():
except Exception as e:
stop_err(str(e))
info = dict(type='dataset',
dataset_id=data_dict['dataset_id'],
ext=ext)
dataset_id=data_dict['dataset_id'],
ext=ext)
json_file.write("%s\n" % dumps(info))
tools/data_source/upload.py
+10 -10
View File
@@ -40,9 +40,9 @@ def stop_err(msg, ret=1):
def file_err(msg, dataset, json_file):
json_file.write(dumps(dict(type='dataset',
ext='data',
dataset_id=dataset.dataset_id,
stderr=msg)) + "\n")
ext='data',
dataset_id=dataset.dataset_id,
stderr=msg)) + "\n")
# never remove a server-side upload
if dataset.type in ('server_dir', 'path_paste'):
return
@@ -332,11 +332,11 @@ def add_file(dataset, registry, json_file, output_path):
# Write the job info
stdout = stdout or 'uploaded %s file' % data_type
info = dict(type='dataset',
dataset_id=dataset.dataset_id,
ext=ext,
stdout=stdout,
name=dataset.name,
line_count=line_count)
dataset_id=dataset.dataset_id,
ext=ext,
stdout=stdout,
name=dataset.name,
line_count=line_count)
if dataset.get('uuid', None) is not None:
info['uuid'] = dataset.get('uuid')
json_file.write(dumps(info) + "\n")
@@ -376,8 +376,8 @@ def add_composite_file(dataset, json_file, output_path, files_path):
shutil.move(dataset.primary_file, output_path)
# Write the job info
info = dict(type='dataset',
dataset_id=dataset.dataset_id,
stdout='uploaded %s file' % dataset.file_type)
dataset_id=dataset.dataset_id,
stdout='uploaded %s file' % dataset.file_type)
json_file.write(dumps(info) + "\n")