From 18473a187e019421933746abb31f8b226e828b80 Mon Sep 17 00:00:00 2001 From: Marius van den Beek Date: Tue, 15 Mar 2016 19:41:09 +0100 Subject: [PATCH] Ensure chrom, start, end as bytestring in BamDataProvider --- lib/galaxy/visualization/data_providers/genome.py | 3 +++ 1 file changed, 3 insertions(+) diff --git a/lib/galaxy/visualization/data_providers/genome.py b/lib/galaxy/visualization/data_providers/genome.py index a4d0a9a0121..ebe634b3c78 100644 --- a/lib/galaxy/visualization/data_providers/genome.py +++ b/lib/galaxy/visualization/data_providers/genome.py @@ -888,6 +888,9 @@ class BamDataProvider( GenomeDataProvider, FilterableMixin ): """ # Fetch and return data. + chrom = str(chrom) + start = int(start) + end = int(end) try: data = data_file.fetch( start=start, end=end, reference=chrom ) except ValueError: