diff --git a/packages/app/HISTORY.rst b/packages/app/HISTORY.rst index 533a70c71c1..ffec227c5a8 100644 --- a/packages/app/HISTORY.rst +++ b/packages/app/HISTORY.rst @@ -9,6 +9,27 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + + +========= +Bug fixes +========= + +* Add selenium test and fix inline images in workflow report tables by `@mvdbeek `_ in `#21698 `_ +* Allow workflow download with missing file source references by `@mvdbeek `_ in `#21814 `_ +* Fix AWS Batch monitor crash, delete copied monitor method by `@mvdbeek `_ in `#21818 `_ +* Fix tool credentials on containerized (Singularity/Docker) destinations by `@arash77 `_ in `#21821 `_ +* Add `builtin_converters` section to integrated tool panel by `@ahmedhamidawan `_ in `#21838 `_ +* Fix output dataset permission guessing by `@mvdbeek `_ in `#21862 `_ +* Enforce storage quota for Celery-based data fetch jobs by `@mvdbeek `_ in `#21941 `_ +* Fix optional parameter persisting ``NO_REPLACEMENT`` sentinel when not provided by `@mvdbeek `_ in `#21964 `_ +* Fix recording duplicate workflow_request_input_step_parameter rows by `@mvdbeek `_ in `#21980 `_ +* Fix NoReplacement handling in workflow callback_helper by `@mvdbeek `_ in `#21994 `_ +* Fix pick_value output inheriting hidden state from input datasets by `@mvdbeek `_ in `#21995 `_ + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/auth/HISTORY.rst b/packages/auth/HISTORY.rst index 17578b5c026..d828430775d 100644 --- a/packages/auth/HISTORY.rst +++ b/packages/auth/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/config/HISTORY.rst b/packages/config/HISTORY.rst index 69d14b34de9..0f4ebb17137 100644 --- a/packages/config/HISTORY.rst +++ b/packages/config/HISTORY.rst @@ -9,6 +9,24 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + + +========= +Bug fixes +========= + +* Add missing enable_beta_tool_formats config option by `@bernt-matthias `_ in `#21190 `_ + +============ +Enhancements +============ + +* Add Deacon idx format by `@SantaMcCloud `_ in `#21632 `_ +* Add amnis cif flow cytometry data type by `@bernt-matthias `_ in `#21829 `_ + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/data/HISTORY.rst b/packages/data/HISTORY.rst index a4a1c24586d..165ca3c938a 100644 --- a/packages/data/HISTORY.rst +++ b/packages/data/HISTORY.rst @@ -9,6 +9,26 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + + +========= +Bug fixes +========= + +* Fix private dataset sharing error handling by `@davelopez `_ in `#21689 `_ +* Fix database migration error from 25.0 > 25.1 by `@jdavcs `_ in `#21737 `_ +* Make database heartbeat more robust (backport) by `@mvdbeek `_ in `#21812 `_ +* Fix recording duplicate workflow_request_input_step_parameter rows by `@mvdbeek `_ in `#21980 `_ + +============= +Other changes +============= + +* Fix worker segfault in gunicorn preload mode on OSX by `@mvdbeek `_ in `#21837 `_ + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/files/HISTORY.rst b/packages/files/HISTORY.rst index b57bd7daf85..6b7b68436bb 100644 --- a/packages/files/HISTORY.rst +++ b/packages/files/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/job_execution/HISTORY.rst b/packages/job_execution/HISTORY.rst index 7c53719aaad..d16233013f9 100644 --- a/packages/job_execution/HISTORY.rst +++ b/packages/job_execution/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/job_metrics/HISTORY.rst b/packages/job_metrics/HISTORY.rst index 50c2cf30163..d757c591b2e 100644 --- a/packages/job_metrics/HISTORY.rst +++ b/packages/job_metrics/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/meta/HISTORY.rst b/packages/meta/HISTORY.rst index a5b0063e1b6..91e1bc7e372 100644 --- a/packages/meta/HISTORY.rst +++ b/packages/meta/HISTORY.rst @@ -9,6 +9,60 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + + +========= +Bug fixes +========= + +* Add missing enable_beta_tool_formats config option by `@bernt-matthias `_ in `#21190 `_ +* Properly parse build info from requirement info by `@bernt-matthias `_ in `#21481 `_ +* Fix private dataset sharing error handling by `@davelopez `_ in `#21689 `_ +* Add selenium test and fix inline images in workflow report tables by `@mvdbeek `_ in `#21698 `_ +* Fix route to workflow editor with version does not load expected version by `@ahmedhamidawan `_ in `#21711 `_ +* Fix database migration error from 25.0 > 25.1 by `@jdavcs `_ in `#21737 `_ +* Fix npm trusted publishing in 25.1 release workflow by `@dannon `_ in `#21747 `_ +* Make galaxy-web-apps package compatible with latest FastAPI by `@nsoranzo `_ in `#21753 `_ +* Fix disable_local_accounts displays register link by `@davelopez `_ in `#21764 `_ +* Fix help forum integration by `@davelopez `_ in `#21773 `_ +* Fix workflow rename modal is not reactive to prop changes by `@ahmedhamidawan `_ in `#21785 `_ +* Fix tag dropdown not closing on outside click, and not selecting in Safari by `@mvdbeek `_ in `#21797 `_ +* Make database heartbeat more robust (backport) by `@mvdbeek `_ in `#21812 `_ +* Allow workflow download with missing file source references by `@mvdbeek `_ in `#21814 `_ +* Fix AWS Batch monitor crash, delete copied monitor method by `@mvdbeek `_ in `#21818 `_ +* Fix form number negative handling by `@davelopez `_ in `#21819 `_ +* Fix tool credentials on containerized (Singularity/Docker) destinations by `@arash77 `_ in `#21821 `_ +* Pin setuptools<82 for galaxy-files package - Backport #21824 by `@nsoranzo `_ in `#21826 `_ +* Add `builtin_converters` section to integrated tool panel by `@ahmedhamidawan `_ in `#21838 `_ +* Fix Galaxy UI nesting in data manager job info view by `@mvdbeek `_ in `#21840 `_ +* Fix output dataset permission guessing by `@mvdbeek `_ in `#21862 `_ +* Fix loading non-tool files from watched tool directories by `@mvdbeek `_ in `#21880 `_ +* Fix credential validation logic in tool form component by `@itisAliRH `_ in `#21889 `_ +* Ensure markdown elements do not render if argument is undefined by `@ahmedhamidawan `_ in `#21908 `_ +* Fix "Create New" in workflow editor not resetting editor state by `@ahmedhamidawan `_ in `#21918 `_ +* Enforce storage quota for Celery-based data fetch jobs by `@mvdbeek `_ in `#21941 `_ +* Fix optional parameter persisting ``NO_REPLACEMENT`` sentinel when not provided by `@mvdbeek `_ in `#21964 `_ +* Fix recording duplicate workflow_request_input_step_parameter rows by `@mvdbeek `_ in `#21980 `_ +* Fix AttributeError when requesting invalid metadata file by `@mvdbeek `_ in `#21985 `_ +* Fix NoReplacement handling in workflow callback_helper by `@mvdbeek `_ in `#21994 `_ +* Fix pick_value output inheriting hidden state from input datasets by `@mvdbeek `_ in `#21995 `_ + +============ +Enhancements +============ + +* Add Deacon idx format by `@SantaMcCloud `_ in `#21632 `_ +* Add amnis cif flow cytometry data type by `@bernt-matthias `_ in `#21829 `_ + +============= +Other changes +============= + +* Fix worker segfault in gunicorn preload mode on OSX by `@mvdbeek `_ in `#21837 `_ + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/navigation/HISTORY.rst b/packages/navigation/HISTORY.rst index 2d2c06fb8ab..d309387b988 100644 --- a/packages/navigation/HISTORY.rst +++ b/packages/navigation/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/objectstore/HISTORY.rst b/packages/objectstore/HISTORY.rst index 1e4e88208e2..bb03fa07a8c 100644 --- a/packages/objectstore/HISTORY.rst +++ b/packages/objectstore/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/schema/HISTORY.rst b/packages/schema/HISTORY.rst index 78c1ca232d6..4bbc6bb67d0 100644 --- a/packages/schema/HISTORY.rst +++ b/packages/schema/HISTORY.rst @@ -9,6 +9,17 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + + +========= +Bug fixes +========= + +* Fix help forum integration by `@davelopez `_ in `#21773 `_ + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/selenium/HISTORY.rst b/packages/selenium/HISTORY.rst index 87b78697a02..16f650e3103 100644 --- a/packages/selenium/HISTORY.rst +++ b/packages/selenium/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/test_api/HISTORY.rst b/packages/test_api/HISTORY.rst index 0516553f15c..060ae127d89 100644 --- a/packages/test_api/HISTORY.rst +++ b/packages/test_api/HISTORY.rst @@ -9,6 +9,18 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + + +========= +Bug fixes +========= + +* Allow workflow download with missing file source references by `@mvdbeek `_ in `#21814 `_ +* Fix pick_value output inheriting hidden state from input datasets by `@mvdbeek `_ in `#21995 `_ + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/test_base/HISTORY.rst b/packages/test_base/HISTORY.rst index c446385a48f..b91cea28acb 100644 --- a/packages/test_base/HISTORY.rst +++ b/packages/test_base/HISTORY.rst @@ -9,6 +9,18 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + + +========= +Bug fixes +========= + +* Add selenium test and fix inline images in workflow report tables by `@mvdbeek `_ in `#21698 `_ +* Fix tool credentials on containerized (Singularity/Docker) destinations by `@arash77 `_ in `#21821 `_ + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/test_driver/HISTORY.rst b/packages/test_driver/HISTORY.rst index d770f86867d..b980f6e3934 100644 --- a/packages/test_driver/HISTORY.rst +++ b/packages/test_driver/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/tool_shed/HISTORY.rst b/packages/tool_shed/HISTORY.rst index 76e42b811cf..1e85864f65c 100644 --- a/packages/tool_shed/HISTORY.rst +++ b/packages/tool_shed/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/tool_shed_schema/HISTORY.rst b/packages/tool_shed_schema/HISTORY.rst index b1a479051f3..162fdbee5be 100644 --- a/packages/tool_shed_schema/HISTORY.rst +++ b/packages/tool_shed_schema/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/tool_util/HISTORY.rst b/packages/tool_util/HISTORY.rst index ec663f44e5b..9866cd2f652 100644 --- a/packages/tool_util/HISTORY.rst +++ b/packages/tool_util/HISTORY.rst @@ -9,6 +9,18 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + + +========= +Bug fixes +========= + +* Properly parse build info from requirement info by `@bernt-matthias `_ in `#21481 `_ +* Fix loading non-tool files from watched tool directories by `@mvdbeek `_ in `#21880 `_ + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/tool_util_models/HISTORY.rst b/packages/tool_util_models/HISTORY.rst index fccf2a455d1..e910e5527c0 100644 --- a/packages/tool_util_models/HISTORY.rst +++ b/packages/tool_util_models/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/tours/HISTORY.rst b/packages/tours/HISTORY.rst index 898be6b66d5..e12f26200a3 100644 --- a/packages/tours/HISTORY.rst +++ b/packages/tours/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/util/HISTORY.rst b/packages/util/HISTORY.rst index 08096889701..825a12f44e5 100644 --- a/packages/util/HISTORY.rst +++ b/packages/util/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/web_apps/HISTORY.rst b/packages/web_apps/HISTORY.rst index 0ac2dcd452d..bfd7fb7be01 100644 --- a/packages/web_apps/HISTORY.rst +++ b/packages/web_apps/HISTORY.rst @@ -9,6 +9,18 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + + +========= +Bug fixes +========= + +* Make galaxy-web-apps package compatible with latest FastAPI by `@nsoranzo `_ in `#21753 `_ +* Fix AttributeError when requesting invalid metadata file by `@mvdbeek `_ in `#21985 `_ + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/web_client/HISTORY.rst b/packages/web_client/HISTORY.rst index d14237ee391..bb8e105c29f 100644 --- a/packages/web_client/HISTORY.rst +++ b/packages/web_client/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/web_framework/HISTORY.rst b/packages/web_framework/HISTORY.rst index 44958d5e9d3..6b89b7c5e94 100644 --- a/packages/web_framework/HISTORY.rst +++ b/packages/web_framework/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) ------------------- diff --git a/packages/web_stack/HISTORY.rst b/packages/web_stack/HISTORY.rst index 666ced5fa24..100494f4246 100644 --- a/packages/web_stack/HISTORY.rst +++ b/packages/web_stack/HISTORY.rst @@ -9,6 +9,12 @@ History +------------------- +25.1.2 (2026-03-09) +------------------- + +No recorded changes since last release + ------------------- 25.1.1 (2026-02-03) -------------------