diff --git a/client/galaxy/scripts/galaxy.panels.js b/client/galaxy/scripts/galaxy.panels.js
index 64faa7f0833..55308b33028 100644
--- a/client/galaxy/scripts/galaxy.panels.js
+++ b/client/galaxy/scripts/galaxy.panels.js
@@ -117,6 +117,8 @@ $.extend( Panel.prototype, {
                     $( this ).hide().off( 'mousemove', move );
                 });
         });
+        window.force_left_panel = function( x ) { self.force_panel( x ) };
+        window.handle_minwidth_hint = function( x ) { self.handle_minwidth_hint( x ) };
     }
 });
 
diff --git a/static/maps/galaxy.panels.js.map b/static/maps/galaxy.panels.js.map
index d765ed0e233..a63faf27e20 100644
--- a/static/maps/galaxy.panels.js.map
+++ b/static/maps/galaxy.panels.js.map
@@ -1 +1 @@
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\ No newline at end of file
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diff --git a/static/maps/utils/uploadbox.js.map b/static/maps/utils/uploadbox.js.map
index d3cda5640d0..4a0359da9df 100644
--- a/static/maps/utils/uploadbox.js.map
+++ b/static/maps/utils/uploadbox.js.map
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diff --git a/static/scripts/galaxy.panels.js b/static/scripts/galaxy.panels.js
index 29aa2051cf9..f4c417323b3 100644
--- a/static/scripts/galaxy.panels.js
+++ b/static/scripts/galaxy.panels.js
@@ -1,2 +1,2 @@
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e=d.$panel.width(),f=d.left?e+b:e-b;f=Math.min(j,Math.max(i,f)),d.resize(f)}var c,d=this;d.$toggle.remove().appendTo("body"),d.$toggle.on("click",function(){d.do_toggle()}),this.$drag.on("mousedown",function(d){c=d.pageX,b("#DD-helper").show().on("mousemove",a).one("mouseup",function(){b(this).hide().off("mousemove",a)})})}});var l=function(a){this.$overlay=a.overlay,this.$dialog=a.dialog,this.$header=this.$dialog.find(".modal-header"),this.$body=this.$dialog.find(".modal-body"),this.$footer=this.$dialog.find(".modal-footer"),this.$backdrop=a.backdrop,this.$header.find(".close").on("click",b.proxy(this.hide,this))};b.extend(l.prototype,{setContent:function(a){this.$header.hide(),a.title&&(this.$header.find(".title").html(a.title),this.$header.show()),a.closeButton?(this.$header.find(".close").show(),this.$header.show()):this.$header.find(".close").hide(),this.$footer.hide();var 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id='DD-helper'/>").appendTo("body").hide()},i=160,j=800,k=function(a){this.$panel=a.panel,this.$center=a.center,this.$drag=a.drag,this.$toggle=a.toggle,this.left=!a.right,this.hidden=!1,this.hidden_by_tool=!1,this.saved_size=null,this.init()};b.extend(k.prototype,{resize:function(a){this.$panel.css("width",a),this.left?this.$center.css("left",a):this.$center.css("right",a),document.recalc&&document.recalc()},do_toggle:function(){var a=this;this.hidden?(this.$toggle.removeClass("hidden"),this.left?this.$panel.css("left",-this.saved_size).show().animate({left:0},"fast",function(){a.resize(a.saved_size)}):this.$panel.css("right",-this.saved_size).show().animate({right:0},"fast",function(){a.resize(a.saved_size)}),a.hidden=!1):(a.saved_size=this.$panel.width(),document.recalc&&document.recalc(),this.left?this.$panel.animate({left:-this.saved_size},"fast"):this.$panel.animate({right:-this.saved_size},"fast"),this.left?this.$center.css("left",0):this.$center.css("right",0),a.hidden=!0,a.$toggle.addClass("hidden")),this.hidden_by_tool=!1},handle_minwidth_hint:function(a){var b=this.$center.width()-(this.hidden?this.saved_size:0);a>b?this.hidden||(this.do_toggle(),this.hidden_by_tool=!0):this.hidden_by_tool&&(this.do_toggle(),this.hidden_by_tool=!1)},force_panel:function(a){(this.hidden&&"show"==a||!this.hidden&&"hide"==a)&&this.do_toggle()},init:function(){function a(a){var b=a.pageX-c;c=a.pageX;var e=d.$panel.width(),f=d.left?e+b:e-b;f=Math.min(j,Math.max(i,f)),d.resize(f)}var c,d=this;d.$toggle.remove().appendTo("body"),d.$toggle.on("click",function(){d.do_toggle()}),this.$drag.on("mousedown",function(d){c=d.pageX,b("#DD-helper").show().on("mousemove",a).one("mouseup",function(){b(this).hide().off("mousemove",a)})}),window.force_left_panel=function(a){d.force_panel(a)},window.handle_minwidth_hint=function(a){d.handle_minwidth_hint(a)}}});var l=function(a){this.$overlay=a.overlay,this.$dialog=a.dialog,this.$header=this.$dialog.find(".modal-header"),this.$body=this.$dialog.find(".modal-body"),this.$footer=this.$dialog.find(".modal-footer"),this.$backdrop=a.backdrop,this.$header.find(".close").on("click",b.proxy(this.hide,this))};b.extend(l.prototype,{setContent:function(a){this.$header.hide(),a.title&&(this.$header.find(".title").html(a.title),this.$header.show()),a.closeButton?(this.$header.find(".close").show(),this.$header.show()):this.$header.find(".close").hide(),this.$footer.hide();var c=this.$footer.find(".buttons").html("");a.buttons&&(b.each(a.buttons,function(a,d){c.append(b("<button></button> ").text(a).click(d)).append(" ")}),this.$footer.show());var d=this.$footer.find(".extra_buttons").html("");a.extra_buttons&&(b.each(a.extra_buttons,function(a,c){d.append(b("<button></button>").text(a).click(c)).append(" ")}),this.$footer.show());var e=a.body;"progress"==e&&(e=b("<div class='progress progress-striped active'><div class='progress-bar' style='width: 100%'></div></div>")),this.$body.html(e)},show:function(a,c){this.$dialog.is(":visible")||(a.backdrop?this.$backdrop.addClass("in"):this.$backdrop.removeClass("in"),this.$overlay.show(),this.$dialog.show(),this.$overlay.addClass("in"),this.$body.css("min-width",this.$body.width()),this.$body.css("max-height",b(window).height()-this.$footer.outerHeight()-this.$header.outerHeight()-parseInt(this.$dialog.css("padding-top"),10)-parseInt(this.$dialog.css("padding-bottom"),10))),c&&c()},hide:function(){var a=this;a.$dialog.fadeOut(function(){a.$overlay.hide(),a.$backdrop.removeClass("in"),a.$body.children().remove(),a.$body.css("min-width",void 0)})}});var m;b(function(){m=new l({overlay:b("#top-modal"),dialog:b("#top-modal-dialog"),backdrop:b("#top-modal-backdrop")})}),b(function(){var a=b("#masthead ul.nav > li.dropdown > .dropdown-menu");b("body").on("click.nav_popups",function(c){if(a.hide(),b("#DD-helper").hide(),!b(c.target).closest("#masthead ul.nav > li.dropdown > .dropdown-menu").length){var d=b(c.target).closest("#masthead ul.nav > li.dropdown");d.length&&(b("#DD-helper").show(),d.children(".dropdown-menu").show(),c.preventDefault())}})}),a.ensure_dd_helper=h,a.Panel=k,a.Modal=l,a.hide_modal=c,a.show_modal=d,a.show_message=e,a.show_in_overlay=f,a.user_changed=g}(window,window.jQuery);
 //# sourceMappingURL=../maps/galaxy.panels.js.map
\ No newline at end of file
diff --git a/static/scripts/utils/uploadbox.js b/static/scripts/utils/uploadbox.js
index 4efe383038e..61279637b26 100755
--- a/static/scripts/utils/uploadbox.js
+++ b/static/scripts/utils/uploadbox.js
@@ -1,2 +1,2 @@
-!function(a){jQuery.event.props.push("dataTransfer"),a.uploadpost=function(b){var c=a.extend({},{data:{},success:function(){},error:function(){},progress:function(){},url:null,maxfilesize:2048,error_filesize:"File exceeds 2GB. Please use an FTP client.",error_default:"Please make sure the file is available.",error_server:"Upload request failed.",error_login:"Uploads require you to log in."},b),d=c.data;if(d.error_message)return void c.error(d.error_message);var e=new FormData;for(var f in d.payload)e.append(f,d.payload[f]);var g=0;for(var f in d.files){var h=d.files[f];e.append(h.name,h.file,h.file.name),g+=h.file.size}return g>1048576*c.maxfilesize?void c.error(c.error_filesize):(xhr=new XMLHttpRequest,xhr.open("POST",c.url,!0),xhr.setRequestHeader("Accept","application/json"),xhr.setRequestHeader("Cache-Control","no-cache"),xhr.setRequestHeader("X-Requested-With","XMLHttpRequest"),xhr.onreadystatechange=function(){if(xhr.readyState==xhr.DONE){var a=null;if(xhr.responseText)try{a=jQuery.parseJSON(xhr.responseText)}catch(b){a=xhr.responseText}if(xhr.status<200||xhr.status>299){var d=xhr.statusText;403==xhr.status?d=c.error_login:0==xhr.status?d=c.error_server:d||(d=c.error_default),c.error(d+" ("+xhr.status+")")}else c.success(a)}},xhr.upload.addEventListener("progress",function(a){a.lengthComputable&&c.progress(Math.round(100*a.loaded/a.total))},!1),console.debug("uploadbox::uploadpost() - Posting following data:"),console.debug(c),void xhr.send(e))},a.fn.uploadinput=function(b){var c=this,d=a.extend({},{ondragover:function(){},ondragleave:function(){},onchange:function(){},multiple:!1},b),e=a('<input type="file" style="display: none" '+(d.multiple&&"multiple"||"")+"/>");return c.append(e).change(function(b){d.onchange(b.target.files),a(this).val("")}),c.on("drop",function(a){d.ondragleave(a),a.dataTransfer&&(d.onchange(a.dataTransfer.files),a.preventDefault())}),c.on("dragover",function(a){a.preventDefault(),d.ondragover(a)}),c.on("dragleave",function(a){a.stopPropagation(),d.ondragleave(a)}),{dialog:function(){e.trigger("click")}}},a.fn.uploadbox=function(b){function c(a){if(a&&a.length&&!p){for(var b=n,c=0;c<a.length;c++){var d=String(n++);m[d]=a[c],l.announce(d,m[d]),o++}return b}}function d(a){m[a]&&(delete m[a],o--)}function e(){if(0==o||q)return q=!1,p=!1,void l.complete();p=!0;var b=-1;for(var c in m){b=c;break}m[b];d(b),a.uploadpost({url:l.url,data:l.initialize(b),success:function(a){l.success(b,a),e()},error:function(a){l.error(b,a),e()},progress:function(a){l.progress(b,a)}})}function f(){r.dialog()}function g(a){for(a in m)d(a)}function h(){p||(p=!0,e())}function i(){q=!0}function j(b){return l=a.extend({},l,b)}function k(){return window.File&&window.FormData&&window.XMLHttpRequest&&window.FileList}var l=a.extend({},{dragover:function(){},dragleave:function(){},announce:function(){},initialize:function(){},progress:function(){},success:function(){},error:function(a,b){alert(b)},complete:function(){}},b),m={},n=0,o=0,p=!1,q=!1,r=a(this).uploadinput({multiple:!0,onchange:function(a){c(a)},ondragover:b.ondragover,ondragleave:b.ondragleave});return{select:f,add:c,remove:d,start:h,stop:i,reset:g,configure:j,compatible:k}}}(jQuery);
+!function(a){jQuery.event.props.push("dataTransfer"),a.uploadpost=function(b){var c=a.extend({},{data:{},success:function(){},error:function(){},progress:function(){},url:null,maxfilesize:2048,error_filesize:"File exceeds 2GB. Please use an FTP client.",error_default:"Please make sure the file is available.",error_server:"Upload request failed.",error_login:"Uploads require you to log in."},b),d=c.data;if(d.error_message)return void c.error(d.error_message);var e=new FormData;for(var f in d.payload)e.append(f,d.payload[f]);var g=0;for(var f in d.files){var h=d.files[f];e.append(h.name,h.file,h.file.name),g+=h.file.size}return g>1048576*c.maxfilesize?void c.error(c.error_filesize):(xhr=new XMLHttpRequest,xhr.open("POST",c.url,!0),xhr.setRequestHeader("Accept","application/json"),xhr.setRequestHeader("Cache-Control","no-cache"),xhr.setRequestHeader("X-Requested-With","XMLHttpRequest"),xhr.onreadystatechange=function(){if(xhr.readyState==xhr.DONE){var a=null;if(xhr.responseText)try{a=jQuery.parseJSON(xhr.responseText)}catch(b){a=xhr.responseText}if(xhr.status<200||xhr.status>299){var d=xhr.statusText;403==xhr.status?d=c.error_login:0==xhr.status?d=c.error_server:d||(d=c.error_default),c.error(d+" ("+xhr.status+")")}else c.success(a)}},xhr.upload.addEventListener("progress",function(a){a.lengthComputable&&c.progress(Math.round(100*a.loaded/a.total))},!1),void xhr.send(e))},a.fn.uploadinput=function(b){var c=this,d=a.extend({},{ondragover:function(){},ondragleave:function(){},onchange:function(){},multiple:!1},b),e=a('<input type="file" style="display: none" '+(d.multiple&&"multiple"||"")+"/>");return c.append(e).change(function(b){d.onchange(b.target.files),a(this).val("")}),c.on("drop",function(a){d.ondragleave(a),a.dataTransfer&&(d.onchange(a.dataTransfer.files),a.preventDefault())}),c.on("dragover",function(a){a.preventDefault(),d.ondragover(a)}),c.on("dragleave",function(a){a.stopPropagation(),d.ondragleave(a)}),{dialog:function(){e.trigger("click")}}},a.fn.uploadbox=function(b){function c(a){if(a&&a.length&&!p){for(var b=n,c=0;c<a.length;c++){var d=String(n++);m[d]=a[c],l.announce(d,m[d]),o++}return b}}function d(a){m[a]&&(delete m[a],o--)}function e(){if(0==o||q)return q=!1,p=!1,void l.complete();p=!0;var b=-1;for(var c in m){b=c;break}m[b];d(b),a.uploadpost({url:l.url,data:l.initialize(b),success:function(a){l.success(b,a),e()},error:function(a){l.error(b,a),e()},progress:function(a){l.progress(b,a)}})}function f(){r.dialog()}function g(a){for(a in m)d(a)}function h(){p||(p=!0,e())}function i(){q=!0}function j(b){return l=a.extend({},l,b)}function k(){return window.File&&window.FormData&&window.XMLHttpRequest&&window.FileList}var l=a.extend({},{dragover:function(){},dragleave:function(){},announce:function(){},initialize:function(){},progress:function(){},success:function(){},error:function(a,b){alert(b)},complete:function(){}},b),m={},n=0,o=0,p=!1,q=!1,r=a(this).uploadinput({multiple:!0,onchange:function(a){c(a)},ondragover:b.ondragover,ondragleave:b.ondragleave});return{select:f,add:c,remove:d,start:h,stop:i,reset:g,configure:j,compatible:k}}}(jQuery);
 //# sourceMappingURL=../../maps/utils/uploadbox.js.map
\ No newline at end of file
diff --git a/templates/base.mako b/templates/base.mako
index 83c12601dc4..8dee3537e00 100644
--- a/templates/base.mako
+++ b/templates/base.mako
@@ -66,9 +66,8 @@
         window.Galaxy = window.Galaxy || {};
 
         ## global configuration object
-        window.galaxy_config = {
-            root: '${h.url_for( "/" )}'
-        };
+        window.Galaxy.root = '${h.url_for( "/" )}';
+        window.galaxy_config = { root: window.Galaxy.root };
 
         ## console protection
         window.console = window.console || {