From 8acfa9fa5c9db089dd1cf922c6deee6ea9bdb97b Mon Sep 17 00:00:00 2001 From: Laila Los <44241786+ElectronicBlueberry@users.noreply.github.com> Date: Wed, 1 Feb 2023 13:08:29 +0100 Subject: [PATCH] strip quotes from edam labels --- lib/galaxy/tool_util/edam_util.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/lib/galaxy/tool_util/edam_util.py b/lib/galaxy/tool_util/edam_util.py index 788cfa86c15..514a551a5c7 100644 --- a/lib/galaxy/tool_util/edam_util.py +++ b/lib/galaxy/tool_util/edam_util.py @@ -65,7 +65,7 @@ def load_edam_tree_from_tsv_stream(tsv_stream: TextIO, *included_terms: str): parents = fields[parents_column].split("|") edam[term_id] = { - "label": fields[label_column], + "label": fields[label_column].strip('"'), "definition": fields[definition_column].strip('"'), "parents": [x[len(EDAM_PREFIX) :] for x in parents if x.startswith(EDAM_PREFIX)], }