diff --git a/lib/galaxy/dependencies/dev-requirements.txt b/lib/galaxy/dependencies/dev-requirements.txt index 8a48ee27d59..cbb8b0ad98d 100644 --- a/lib/galaxy/dependencies/dev-requirements.txt +++ b/lib/galaxy/dependencies/dev-requirements.txt @@ -25,7 +25,7 @@ codespell==2.2.2 ; python_version >= "3.7" and python_version < "3.11" colorama==0.4.6 ; python_version >= "3.7" and python_version < "3.11" and sys_platform == "win32" or python_version >= "3.7" and python_version < "3.11" and platform_system == "Windows" commonmark==0.9.1 ; python_version >= "3.7" and python_version < "3.11" coverage[toml]==7.0.1 ; python_version >= "3.7" and python_version < "3.11" -cwltest==2.2.20210901154959 ; python_version >= "3.7" and python_version < "3.11" +cwltest==2.3.20230108193615 ; python_version >= "3.7" and python_version < "3.11" cycler==0.11.0 ; python_version >= "3.7" and python_version < "3.11" darker==1.6.1 ; python_version >= "3.7" and python_version < "3.11" defusedxml==0.7.1 ; python_version >= "3.7" and python_version < "3.11" diff --git a/lib/galaxy_test/base/populators.py b/lib/galaxy_test/base/populators.py index 1f1af617a06..456c7afeff8 100644 --- a/lib/galaxy_test/base/populators.py +++ b/lib/galaxy_test/base/populators.py @@ -67,7 +67,7 @@ from typing import ( ) from uuid import UUID -import cwltest.utils +import cwltest.compare import requests import yaml from bioblend.galaxy import GalaxyClient @@ -2241,7 +2241,7 @@ class CwlPopulator: try: for key, value in expected_outputs.items(): actual_output = run.get_output_as_object(key) - cwltest.utils.compare(value, actual_output) + cwltest.compare.compare(value, actual_output) except Exception: self.dataset_populator._summarize_history(run.history_id) raise diff --git a/pyproject.toml b/pyproject.toml index f3ff6111d42..d19959e4dfa 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -116,7 +116,7 @@ zipstream-new = "*" ase = ">=3.18.1" black = "^22.1.0" codespell = "*" -cwltest = "2.2.20210901154959" +cwltest = "*" darker = "*" fluent-logger = "*" httpx = "*"