From 737f5b49cdec929dcaa32cd288b7aff4e3d7d4de Mon Sep 17 00:00:00 2001 From: Wen-Yu Chung Date: Mon, 25 Feb 2008 17:29:21 +0000 Subject: [PATCH] new quality score datatype. --- lib/galaxy/datatypes/qualityscore.py | 19 +++++++++++++++++++ 1 file changed, 19 insertions(+) create mode 100644 lib/galaxy/datatypes/qualityscore.py diff --git a/lib/galaxy/datatypes/qualityscore.py b/lib/galaxy/datatypes/qualityscore.py new file mode 100644 index 00000000000..21dea35a763 --- /dev/null +++ b/lib/galaxy/datatypes/qualityscore.py @@ -0,0 +1,19 @@ +""" +Qualityscore class +""" + +import data +import logging +from galaxy.datatypes.sniff import * + +log = logging.getLogger(__name__) + +class QualityScore ( data.Text ): + """ + until we know more about quality score formats + """ + file_ext = "qual" + def set_peek( self, dataset ): + dataset.peek = data.get_file_peek( dataset.file_name ) + dataset.blurb = "%s lines, Quality score file" %( data.get_line_count( dataset.file_name ) ) + \ No newline at end of file