From 706a76ea80308aa00c0e316deaf10c8c46cd427e Mon Sep 17 00:00:00 2001
From: John Chilton <jmchilton@gmail.com>
Date: Tue, 19 Jul 2016 12:06:47 -0400
Subject: [PATCH] Add tool test for what happens when output filter throws
 exception.

Run new test with:

```
./run_tests.sh -framework -id output_filter_exception_1
```

xref https://github.com/galaxyproject/tools-iuc/pull/883
xref https://github.com/galaxyproject/planemo/commit/a066afb1c2c30f4ef2c3033ab9a884b31c06e783
xref https://github.com/galaxy-iuc/standards/pull/31
---
 .../tools/output_filter_exception_1.xml       | 35 +++++++++++++++++++
 test/functional/tools/samples_tool_conf.xml   |  1 +
 2 files changed, 36 insertions(+)
 create mode 100644 test/functional/tools/output_filter_exception_1.xml

diff --git a/test/functional/tools/output_filter_exception_1.xml b/test/functional/tools/output_filter_exception_1.xml
new file mode 100644
index 00000000000..b024729720e
--- /dev/null
+++ b/test/functional/tools/output_filter_exception_1.xml
@@ -0,0 +1,35 @@
+<tool id="output_filter_exception_1" name="output_filter_exception_1" version="1.0.0">
+  <command>
+    echo "test" > 1;
+    echo "test" > 2;
+    echo "test" > 3;
+    echo "test" > 4;
+    echo "test" > 5;
+  </command>
+  <inputs>
+    <conditional name="options">
+      <param help="" label="Options" name="options" type="select">
+        <option selected="True" value="default">Use defaults</option>
+        <option value="advanced">Specify advanced options</option>
+      </param>
+      <when value="default" />
+      <when value="advanced">
+        <param falsevalue="" truevalue="--adv_opt1" help="" name="adv_opt1" type="boolean" />
+      </when>
+    </conditional>
+  </inputs>
+  <outputs>
+    <data format="txt" from_work_dir="1" name="out_1">
+    </data>
+    <data format="txt" from_work_dir="2" name="out_2">
+      <filter>opitons['adv_opt1'] is True</filter>
+    </data>
+  </outputs>
+  <tests>
+    <!-- Filter condition throws exception, filter "fails" and so output is produced. -->
+    <test expect_num_outputs="2">
+      <output name="out_1"><assert_contents><has_line line="test" /></assert_contents></output>
+      <output name="out_2"><assert_contents><has_line line="test" /></assert_contents></output>
+    </test>
+  </tests>
+</tool>
\ No newline at end of file
diff --git a/test/functional/tools/samples_tool_conf.xml b/test/functional/tools/samples_tool_conf.xml
index 5ec9446d0f2..51a00844204 100644
--- a/test/functional/tools/samples_tool_conf.xml
+++ b/test/functional/tools/samples_tool_conf.xml
@@ -41,6 +41,7 @@
   <tool file="output_format.xml" />
   <tool file="output_format_collection.xml" />
   <tool file="output_filter.xml" />
+  <tool file="output_filter_exception_1.xml" />
   <tool file="output_collection_filter.xml" />
   <tool file="output_auto_format.xml" />
   <tool file="create_10.xml" />