From 6d14b2b73dc48337800e2365ba96cab3b55e7dcd Mon Sep 17 00:00:00 2001
From: Matthias Bernt <m.bernt@ufz.de>
Date: Fri, 15 Oct 2021 12:37:56 +0200
Subject: [PATCH] make vg a subclass of CompressedArchive

the test data in IUC's vg repo is (`file test-data/*vg`):

- test-data/hla.vg: data
- test-data/x.vg:   Blocked GNU Zip Format (BGZF; gzip compatible), block length 2909

this makes https://github.com/galaxyproject/tools-iuc/pull/4070
fail because the x.vg file is decompressed during upload
---
 lib/galaxy/config/sample/datatypes_conf.xml.sample | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/lib/galaxy/config/sample/datatypes_conf.xml.sample b/lib/galaxy/config/sample/datatypes_conf.xml.sample
index 51ed61de97a..49a4228a9eb 100644
--- a/lib/galaxy/config/sample/datatypes_conf.xml.sample
+++ b/lib/galaxy/config/sample/datatypes_conf.xml.sample
@@ -449,7 +449,7 @@
     </datatype>
     <datatype extension="interval_index" type="galaxy.datatypes.binary:Binary" subclass="true"/>
     <datatype extension="odgi" type="galaxy.datatypes.binary:Binary" subclass="true" description="Genomic variation graphs self index used by odgi." display_in_upload="true"/>
-    <datatype extension="vg" type="galaxy.datatypes.binary:Binary" subclass="true" description="Genomic variation graphs." display_in_upload="true"/>
+    <datatype extension="vg" type="galaxy.datatypes.binary:CompressedArchive" subclass="true" description="Genomic variation graphs." display_in_upload="true"/>
     <datatype extension="xg" type="galaxy.datatypes.binary:Binary" subclass="true" description="Genomic variation graphs with vg index." display_in_upload="true"/>
     <datatype extension="protobuf2" type="galaxy.datatypes.binary:Binary" subclass="true" description="Protocol Buffers (Protobuf) is data format for serializing structured data." display_in_upload="true"/>
     <datatype extension="protobuf3" type="galaxy.datatypes.binary:Binary" subclass="true" description="Protocol Buffers (Protobuf) is data format for serializing structured data." display_in_upload="true"/>