From 6cb9d664dee2af178f179e9fc3f528710c5d4507 Mon Sep 17 00:00:00 2001 From: anup kumar Date: Sun, 14 Jan 2018 11:42:15 +0100 Subject: [PATCH] Fix Galaxy instance startup error --- scripts/common_startup.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/common_startup.sh b/scripts/common_startup.sh index 736d8e4568f..41344166bf9 100755 --- a/scripts/common_startup.sh +++ b/scripts/common_startup.sh @@ -174,7 +174,7 @@ if [ $DEV_WHEELS -eq 1 ]; then fi if [ $FETCH_WHEELS -eq 1 ]; then - pip install "$requirement_args" --index-url "${GALAXY_WHEELS_INDEX_URL}" --extra-index-url "${PYPI_INDEX_URL}" + pip install $requirement_args --index-url "${GALAXY_WHEELS_INDEX_URL}" --extra-index-url "${PYPI_INDEX_URL}" GALAXY_CONDITIONAL_DEPENDENCIES=$(PYTHONPATH=lib python -c "import galaxy.dependencies; print '\n'.join(galaxy.dependencies.optional('$GALAXY_CONFIG_FILE'))") [ -z "$GALAXY_CONDITIONAL_DEPENDENCIES" ] || echo "$GALAXY_CONDITIONAL_DEPENDENCIES" | pip install -r /dev/stdin --index-url "${GALAXY_WHEELS_INDEX_URL}" --extra-index-url "${PYPI_INDEX_URL}" fi