From 64553e62fa0b770790e239cf421e19b1879ae651 Mon Sep 17 00:00:00 2001
From: Kelly Vincent <kpvincent@bx.psu.edu>
Date: Fri, 14 Jan 2011 00:23:15 -0500
Subject: [PATCH] Removed errant right parenthesis from BFAST wrapper command

---
 tools/sr_mapping/bfast_wrapper.xml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/tools/sr_mapping/bfast_wrapper.xml b/tools/sr_mapping/bfast_wrapper.xml
index 8445a2f4b52..e77b4a02546 100644
--- a/tools/sr_mapping/bfast_wrapper.xml
+++ b/tools/sr_mapping/bfast_wrapper.xml
@@ -25,7 +25,7 @@
       #end if
     #else:
       ##use precomputed indexes
-      --ref="${ refGenomeSource.indices.fields.path ) }"
+      --ref="${ refGenomeSource.indices.fields.path }"
     #end if
     
     #if $params.source_select == "full":