From 5c014d2048d47c3b1784d0efae7245ff80628f6e Mon Sep 17 00:00:00 2001 From: mvdbeek Date: Tue, 3 May 2022 17:12:22 +0200 Subject: [PATCH] Bump ncb-datasets-cli dependency to 13.14.0 Fixes ``` panic: runtime error: invalid memory address or nil pointer dereference [signal SIGSEGV: segmentation violation code=0x1 addr=0x10 pc=0x8a3fea] goroutine 1 [running]: main/datasets/datasets.downloadData(0xc000010380, 0x0, 0x0, 0x0, 0x7ffe36956316, 0x62, 0xffffffffffffffff, 0x0, 0x0) src/datasets/datasets/Download.go:41 +0xea main/datasets/datasets.downloadAssembly(0xc000069100, 0x7ffe36956316, 0x62, 0x8ef4a0, 0xc000010298) src/datasets/datasets/DownloadGenome.go:63 +0x294 main/datasets/datasets.glob..func1(0xd9d080, 0xc000074730, 0x0, 0x5, 0x0, 0x0) src/datasets/datasets/Download.go:106 +0x2a7 github.com/spf13/cobra.(*Command).execute(0xd9d080, 0xc0000746e0, 0x5, 0x5, 0xd9d080, 0xc0000746e0) external/com_github_spf13_cobra/command.go:842 +0x472 github.com/spf13/cobra.(*Command).ExecuteC(0xd9cde0, 0x4686c5, 0xc000000180, 0x200000003) external/com_github_spf13_cobra/command.go:950 +0x375 github.com/spf13/cobra.(*Command).Execute(...) external/com_github_spf13_cobra/command.go:887 main/datasets/datasets.Execute() src/datasets/datasets/root.go:444 +0x31 main.main() src/cmd/datasets/main.go:10 +0x25 ``` --- tools/data_source/ncbi_datasets.xml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/tools/data_source/ncbi_datasets.xml b/tools/data_source/ncbi_datasets.xml index 4694da9541f..bfd29276541 100644 --- a/tools/data_source/ncbi_datasets.xml +++ b/tools/data_source/ncbi_datasets.xml @@ -1,10 +1,10 @@ - + import data from the NCBI Datasets Genomes page operation_0224 - ncbi-datasets-cli + ncbi-datasets-cli datasets version