diff --git a/client/galaxy/scripts/apps/history-app.js b/client/galaxy/scripts/apps/history-app.js deleted file mode 100644 index cde7d4fd8a1..00000000000 --- a/client/galaxy/scripts/apps/history-app.js +++ /dev/null @@ -1,40 +0,0 @@ - -var GalaxyMasthead = require( '../galaxy.masthead' ).GalaxyMasthead, - GalaxyMenu = require( '../galaxy.menu' ).GalaxyMenu, - History = require( '../mvc/history/history-model' ).History, - HistoryPanelEdit = require( '../mvc/history/history-panel-edit' ).HistoryPanelEdit; - -//TODO: this doesn't address multiple apps per page -window.app = function app( options, bootstrapped ){ - if( !( Galaxy.masthead && Galaxy.menu ) ){ - // adapter to galaxy.masthead.mako config - var mastheadConfig = _.extend( _.clone( Galaxy.config ), { - user : { - requests : Galaxy.currUser.get( 'requests' ), - email : Galaxy.currUser.get( 'email' ), - valid : Galaxy.currUser.isAnonymous(), - json : Galaxy.currUser.toJSON() - } - }); - Galaxy.masthead = new GalaxyMasthead( mastheadConfig ); - Galaxy.menu = new GalaxyMenu({ - masthead : Galaxy.masthead, - config : mastheadConfig - }); - console.debug( Galaxy.masthead ); - console.debug( Galaxy.menu ); - } - - bootstrapped = bootstrapped || {}; - window.panel = new HistoryPanelEdit({ - show_deleted : bootstrapped.show_deleted, - show_hidden : bootstrapped.show_deleted, - purgeAllowed : Galaxy.config.allow_user_dataset_purge, - model : new History( bootstrapped.history, bootstrapped.contents ) - }); - $(function(){ - panel.render().$el.appendTo( ( options || {} ).panelLoc || 'body' ); - }); - - return panel; -}; diff --git a/client/galaxy/scripts/apps/libs.js b/client/galaxy/scripts/apps/libs.js deleted file mode 100644 index a4df7d3aced..00000000000 --- a/client/galaxy/scripts/apps/libs.js +++ /dev/null @@ -1,2 +0,0 @@ -var libExports = require( '../libs/common-libs.js' ); -exports = libExports; diff --git a/client/galaxy/scripts/libs/common-libs.js b/client/galaxy/scripts/libs/common-libs.js deleted file mode 100644 index e3d299a77ea..00000000000 --- a/client/galaxy/scripts/libs/common-libs.js +++ /dev/null @@ -1,31 +0,0 @@ -// common js libraries -var jquery = require( 'jquery' ); -window.jQuery = window.$ = jquery; -require( './jquery/jquery.migrate' ); - -// jquery plugins -require( './jquery/select2' ); -require( './jquery/jquery.event.hover' ); -require( './jquery/jquery.form' ); -require( './jquery/jquery.rating' ); -require( './jquery.sparklines' ); - -require( './bootstrap' ); - -// MVC via backbone -var _ = require( './underscore' ); -window._ = _; -var Backbone = require( './backbone' ); -window.Backbone = Backbone; -var Handlebars = require( './handlebars.runtime' ); -window.Handlebars = Handlebars; - -// all pages get these -require( '../galaxy.base' ); -require( '../galaxy.panels' ); -require( '../galaxy.autocom_tagging' ); - -exports.jquery = jquery; -exports._ = _; -exports.Backbone = Backbone; -exports.Handlebars = Handlebars; diff --git 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\ No newline at end of file diff --git a/static/scripts/apps/history-app.js b/static/scripts/apps/history-app.js deleted file mode 100644 index aa00ffd004a..00000000000 --- a/static/scripts/apps/history-app.js +++ /dev/null @@ -1,2 +0,0 @@ -var GalaxyMasthead=require("../galaxy.masthead").GalaxyMasthead,GalaxyMenu=require("../galaxy.menu").GalaxyMenu,History=require("../mvc/history/history-model").History,HistoryPanelEdit=require("../mvc/history/history-panel-edit").HistoryPanelEdit;window.app=function(a,b){if(!Galaxy.masthead||!Galaxy.menu){var c=_.extend(_.clone(Galaxy.config),{user:{requests:Galaxy.currUser.get("requests"),email:Galaxy.currUser.get("email"),valid:Galaxy.currUser.isAnonymous(),json:Galaxy.currUser.toJSON()}});Galaxy.masthead=new GalaxyMasthead(c),Galaxy.menu=new GalaxyMenu({masthead:Galaxy.masthead,config:c}),console.debug(Galaxy.masthead),console.debug(Galaxy.menu)}return b=b||{},window.panel=new HistoryPanelEdit({show_deleted:b.show_deleted,show_hidden:b.show_deleted,purgeAllowed:Galaxy.config.allow_user_dataset_purge,model:new History(b.history,b.contents)}),$(function(){panel.render().$el.appendTo((a||{}).panelLoc||"body")}),panel}; -//# sourceMappingURL=../../maps/apps/history-app.js.map \ No newline at end of file diff --git a/static/scripts/apps/libs.js b/static/scripts/apps/libs.js deleted file mode 100644 index b40d095f50f..00000000000 --- a/static/scripts/apps/libs.js +++ /dev/null @@ -1,2 +0,0 @@ -var libExports=require("../libs/common-libs.js");exports=libExports; -//# sourceMappingURL=../../maps/apps/libs.js.map \ No newline at end of file diff --git a/static/scripts/galaxy-app-base.js b/static/scripts/galaxy-app-base.js index 7abece94c81..793710e1218 100644 --- a/static/scripts/galaxy-app-base.js +++ b/static/scripts/galaxy-app-base.js @@ -1,104 +1,2 @@ -define([ "libs/underscore", "libs/backbone", "mvc/base-mvc", "mvc/user/user-model", "utils/metrics-logger", "utils/add-logging", "utils/localization" ], function(_, Backbone, BASE_MVC, userModel, metricsLogger, addLogging, localize) { - function GalaxyApp(options, bootstrapped) { - console.debug("GalaxyApp:", options, bootstrapped); - var self = this; - return self._init(options || {}, bootstrapped || {}); - } - addLogging(GalaxyApp, "GalaxyApp"); - var DEBUGGING_KEY = "galaxy:debug", NAMESPACE_KEY = DEBUGGING_KEY + ":namespaces", localDebugging = !1; - try { - localDebugging = "true" == localStorage.getItem(DEBUGGING_KEY); - } catch (storageErr) { - console.log(localize("localStorage not available for debug flag retrieval")); - } - return GalaxyApp.prototype._init = function(options, bootstrapped) { - var self = this; - return _.extend(self, Backbone.Events), localDebugging && (self.logger = console), - self._processOptions(options), self.debug("GalaxyApp.options: ", self.options), - self.root = options.root || "/", self._initConfig(options.config || bootstrapped.config || {}), - self.debug("GalaxyApp.config: ", self.config), self._patchGalaxy(window.Galaxy), - self._initLogger(self.options.loggerOptions || {}), self.debug("GalaxyApp.logger: ", self.logger), - self._initLocale(), self.debug("GalaxyApp.localize: ", self.localize), self.config = options.config || {}, - self.debug("GalaxyApp.config: ", self.config), self._initUser(options.user || {}), - self.debug("GalaxyApp.user: ", self.user), self._setUpListeners(), self.trigger("ready", self), - self; - }, GalaxyApp.prototype.defaultOptions = { - patchExisting: !0, - root: "/" - }, GalaxyApp.prototype._processOptions = function(options) { - var self = this, defaults = self.defaultOptions; - self.debug("_processOptions: ", options), self.options = {}; - for (var k in defaults) defaults.hasOwnProperty(k) && (self.options[k] = options.hasOwnProperty(k) ? options[k] : defaults[k]); - return self; - }, GalaxyApp.prototype._initConfig = function(config) { - var self = this; - return self.debug("_initConfig: ", config), self.config = config, self.config.debug = localDebugging || self.config.debug, - self; - }, GalaxyApp.prototype._patchGalaxy = function(patchWith) { - var self = this; - if (self.options.patchExisting && patchWith) { - self.debug("found existing Galaxy object:", patchWith); - for (var k in patchWith) patchWith.hasOwnProperty(k) && (self.debug(" patching in " + k + " to Galaxy"), - self[k] = patchWith[k]); - } - }, GalaxyApp.prototype._initLogger = function(loggerOptions) { - var self = this; - if (self.config.debug) { - loggerOptions.consoleLogger = loggerOptions.consoleLogger || console, loggerOptions.consoleLevel = loggerOptions.consoleLevel || metricsLogger.MetricsLogger.ALL; - try { - loggerOptions.consoleNamespaceWhitelist = localStorage.getItem(NAMESPACE_KEY).split(","); - } catch (storageErr) {} - } - return self.debug("_initLogger:", loggerOptions), self.logger = new metricsLogger.MetricsLogger(loggerOptions), - self.config.debug && (BASE_MVC.LoggableMixin.logger = self.logger), self; - }, GalaxyApp.prototype._initLocale = function(options) { - var self = this; - return self.debug("_initLocale:", options), self.localize = localize, window._l = self.localize, - self; - }, GalaxyApp.prototype._initUser = function(userJSON) { - var self = this; - return self.debug("_initUser:", userJSON), self.user = new userModel.User(userJSON), - self.user.logger = self.logger, self.currUser = self.user, self; - }, GalaxyApp.prototype._setUpListeners = function() { - var self = this; - return self.lastAjax = {}, $(document).bind("ajaxSend", function(ev, xhr, options) { - var data = options.data; - try { - data = JSON.parse(data); - } catch (err) {} - self.lastAjax = { - url: location.href.slice(0, -1) + options.url, - data: data - }; - }), self; - }, GalaxyApp.prototype.debugging = function(setting) { - var self = this; - try { - if (void 0 === setting) return "true" === localStorage.getItem(DEBUGGING_KEY); - if (setting) return localStorage.setItem(DEBUGGING_KEY, !0), !0; - localStorage.removeItem(DEBUGGING_KEY), self.debuggingNamespaces(null); - } catch (storageErr) { - console.log(localize("localStorage not available for debug flag retrieval")); - } - return !1; - }, GalaxyApp.prototype.debuggingNamespaces = function(namespaces) { - var self = this; - try { - if (void 0 === namespaces) { - var csv = localStorage.getItem(NAMESPACE_KEY); - return "string" == typeof csv ? csv.split(",") : []; - } - null === namespaces ? localStorage.removeItem(NAMESPACE_KEY) : localStorage.setItem(NAMESPACE_KEY, namespaces); - var newSettings = self.debuggingNamespaces(); - return self.logger && (self.logger.options.consoleNamespaceWhitelist = newSettings), - newSettings; - } catch (storageErr) { - console.log(localize("localStorage not available for debug namespace retrieval")); - } - }, GalaxyApp.prototype.toString = function() { - var userEmail = this.user ? this.user.get("email") || "(anonymous)" : "uninitialized"; - return "GalaxyApp(" + userEmail + ")"; - }, { - GalaxyApp: GalaxyApp - }; -}); \ No newline at end of file +define(["libs/underscore","libs/backbone","mvc/base-mvc","mvc/user/user-model","utils/metrics-logger","utils/add-logging","utils/localization"],function(a,b,c,d,e,f,g){function h(a,b){console.debug("GalaxyApp:",a,b);var c=this;return c._init(a||{},b||{})}f(h,"GalaxyApp");var i="galaxy:debug",j=i+":namespaces",k=!1;try{k="true"==localStorage.getItem(i)}catch(l){console.log(g("localStorage not available for debug flag retrieval"))}return h.prototype._init=function(c,d){var e=this;return a.extend(e,b.Events),k&&(e.logger=console),e._processOptions(c),e.debug("GalaxyApp.options: ",e.options),e.root=c.root||"/",e._initConfig(c.config||d.config||{}),e.debug("GalaxyApp.config: ",e.config),e._patchGalaxy(window.Galaxy),e._initLogger(e.options.loggerOptions||{}),e.debug("GalaxyApp.logger: ",e.logger),e._initLocale(),e.debug("GalaxyApp.localize: ",e.localize),e.config=c.config||{},e.debug("GalaxyApp.config: ",e.config),e._initUser(c.user||{}),e.debug("GalaxyApp.user: ",e.user),e._setUpListeners(),e.trigger("ready",e),e},h.prototype.defaultOptions={patchExisting:!0,root:"/"},h.prototype._processOptions=function(a){var b=this,c=b.defaultOptions;b.debug("_processOptions: ",a),b.options={};for(var d in c)c.hasOwnProperty(d)&&(b.options[d]=a.hasOwnProperty(d)?a[d]:c[d]);return b},h.prototype._initConfig=function(a){var b=this;return b.debug("_initConfig: ",a),b.config=a,b.config.debug=k||b.config.debug,b},h.prototype._patchGalaxy=function(a){var b=this;if(b.options.patchExisting&&a){b.debug("found existing Galaxy object:",a);for(var c in a)a.hasOwnProperty(c)&&(b.debug(" patching in "+c+" to Galaxy"),b[c]=a[c])}},h.prototype._initLogger=function(a){var b=this;if(b.config.debug){a.consoleLogger=a.consoleLogger||console,a.consoleLevel=a.consoleLevel||e.MetricsLogger.ALL;try{a.consoleNamespaceWhitelist=localStorage.getItem(j).split(",")}catch(d){}}return b.debug("_initLogger:",a),b.logger=new e.MetricsLogger(a),b.config.debug&&(c.LoggableMixin.logger=b.logger),b},h.prototype._initLocale=function(a){var b=this;return b.debug("_initLocale:",a),b.localize=g,window._l=b.localize,b},h.prototype._initUser=function(a){var b=this;return b.debug("_initUser:",a),b.user=new d.User(a),b.user.logger=b.logger,b.currUser=b.user,b},h.prototype._setUpListeners=function(){var a=this;return a.lastAjax={},$(document).bind("ajaxSend",function(b,c,d){var e=d.data;try{e=JSON.parse(e)}catch(f){}a.lastAjax={url:location.href.slice(0,-1)+d.url,data:e}}),a},h.prototype.debugging=function(a){var b=this;try{if(void 0===a)return"true"===localStorage.getItem(i);if(a)return localStorage.setItem(i,!0),!0;localStorage.removeItem(i),b.debuggingNamespaces(null)}catch(c){console.log(g("localStorage not available for debug flag retrieval"))}return!1},h.prototype.debuggingNamespaces=function(a){var b=this;try{if(void 0===a){var c=localStorage.getItem(j);return"string"==typeof c?c.split(","):[]}null===a?localStorage.removeItem(j):localStorage.setItem(j,a);var d=b.debuggingNamespaces();return b.logger&&(b.logger.options.consoleNamespaceWhitelist=d),d}catch(e){console.log(g("localStorage not available for debug namespace retrieval"))}},h.prototype.toString=function(){var a=this.user?this.user.get("email")||"(anonymous)":"uninitialized";return"GalaxyApp("+a+")"},{GalaxyApp:h}}); +//# sourceMappingURL=../maps/galaxy-app-base.js.map \ No newline at end of file diff --git a/static/scripts/galaxy.base.js b/static/scripts/galaxy.base.js index 82dc69f840f..e6f04806454 100644 --- a/static/scripts/galaxy.base.js +++ b/static/scripts/galaxy.base.js @@ -1,270 +1,2 @@ -function obj_length(obj) { - if (void 0 !== obj.length) return obj.length; - var count = 0; - for (var element in obj) count++; - return count; -} - -function make_popupmenu(button_element, initial_options) { - var element_menu_exists = button_element.data("menu_options"); - button_element.data("menu_options", initial_options), element_menu_exists || button_element.bind("click.show_popup", function(e) { - return $(".popmenu-wrapper").remove(), setTimeout(function() { - var menu_element = $(""), options = button_element.data("menu_options"); - obj_length(options) <= 0 && $("
  • No Options.
    • ").appendTo(menu_element), $.each(options, function(k, v) { - if (v) { - var action = v.action || v; - menu_element.append($("
  • ").append($("").attr("href", v.url).html(k).click(action))); - } else menu_element.append($("
  • ").addClass("head").append($("    ").html(k))); - }); - var wrapper = $("
    ").append(menu_element).appendTo("body"), x = e.pageX - wrapper.width() / 2; - x = Math.min(x, $(document).scrollLeft() + $(window).width() - $(wrapper).width() - 5), - x = Math.max(x, $(document).scrollLeft() + 5), wrapper.css({ - top: e.pageY, - left: x - }); - }, 10), setTimeout(function() { - var close_popup = function(el) { - $(el).bind("click.close_popup", function() { - $(".popmenu-wrapper").remove(), el.unbind("click.close_popup"); - }); - }; - close_popup($(window.document)), close_popup($(window.top.document)); - for (var frame_id = window.top.frames.length; frame_id--; ) { - var frame = $(window.top.frames[frame_id].document); - close_popup(frame); - } - }, 50), !1; - }); -} - -function make_popup_menus(parent) { - parent = parent || document, $(parent).find("div[popupmenu]").each(function() { - var options = {}, menu = $(this); - menu.find("a").each(function() { - var link = $(this), link_dom = link.get(0), confirmtext = link_dom.getAttribute("confirm"), href = link_dom.getAttribute("href"), target = link_dom.getAttribute("target"); - options[link.text()] = href ? { - url: href, - action: function(event) { - if (!confirmtext || confirm(confirmtext)) { - if (target) return window.open(href, target), !1; - link.click(); - } else event.preventDefault(); - } - } : null; - }); - var box = $(parent).find("#" + menu.attr("popupmenu")); - box.find("a").bind("click", function(e) { - return e.stopPropagation(), !0; - }), make_popupmenu(box, options), box.addClass("popup"), menu.remove(); - }); -} - -function replace_big_select_inputs(min_length, max_length, select_elts) { - jQuery.fn.select2 && (void 0 === min_length && (min_length = 20), void 0 === max_length && (max_length = 3e3), - select_elts = select_elts || $("select"), select_elts.each(function() { - var select_elt = $(this).not("[multiple]"), num_options = select_elt.find("option").length; - min_length > num_options || num_options > max_length || select_elt.hasClass("no-autocomplete") || select_elt.refresh_select2(); - })); -} - -function async_save_text(click_to_edit_elt, text_elt_id, save_url, text_parm_name, num_cols, use_textarea, num_rows, on_start, on_finish) { - void 0 === num_cols && (num_cols = 30), void 0 === num_rows && (num_rows = 4), $("#" + click_to_edit_elt).click(function() { - if (!($("#renaming-active").length > 0)) { - var t, text_elt = $("#" + text_elt_id), old_text = text_elt.text(); - t = use_textarea ? $("").attr({ - rows: num_rows, - cols: num_cols - }).text($.trim(old_text)) : $("").attr({ - value: $.trim(old_text), - size: num_cols - }), t.attr("id", "renaming-active"), t.blur(function() { - $(this).remove(), text_elt.show(), on_finish && on_finish(t); - }), t.keyup(function(e) { - if (27 === e.keyCode) $(this).trigger("blur"); else if (13 === e.keyCode) { - var ajax_data = {}; - ajax_data[text_parm_name] = $(this).val(), $(this).trigger("blur"), $.ajax({ - url: save_url, - data: ajax_data, - error: function() { - alert("Text editing for elt " + text_elt_id + " failed"); - }, - success: function(processed_text) { - "" !== processed_text ? text_elt.text(processed_text) : text_elt.html("None"), - on_finish && on_finish(t); - } - }); - } - }), on_start && on_start(t), text_elt.hide(), t.insertAfter(text_elt), t.focus(), - t.select(); - } - }); -} - -function commatize(number) { - number += ""; - for (var rgx = /(\d+)(\d{3})/; rgx.test(number); ) number = number.replace(rgx, "$1,$2"); - return number; -} - -function reset_tool_search(initValue) { - var tool_menu_frame = $("#galaxy_tools").contents(); - if (0 === tool_menu_frame.length && (tool_menu_frame = $(document)), $(this).removeClass("search_active"), - tool_menu_frame.find(".toolTitle").removeClass("search_match"), tool_menu_frame.find(".toolSectionBody").hide(), - tool_menu_frame.find(".toolTitle").show(), tool_menu_frame.find(".toolPanelLabel").show(), - tool_menu_frame.find(".toolSectionWrapper").each(function() { - "recently_used_wrapper" !== $(this).attr("id") ? $(this).show() : $(this).hasClass("user_pref_visible") && $(this).show(); - }), tool_menu_frame.find("#search-no-results").hide(), tool_menu_frame.find("#search-spinner").hide(), - initValue) { - var search_input = tool_menu_frame.find("#tool-search-query"); - search_input.val("search tools"); - } -} - -function init_refresh_on_change() { - $("select[refresh_on_change='true']").off("change").change(function() { - var select_field = $(this), select_val = select_field.val(), ref_on_change_vals = select_field.attr("refresh_on_change_values"); - if (ref_on_change_vals) { - ref_on_change_vals = ref_on_change_vals.split(","); - var last_selected_value = select_field.attr("last_selected_value"); - if (-1 === $.inArray(select_val, ref_on_change_vals) && -1 === $.inArray(last_selected_value, ref_on_change_vals)) return; - } - $(window).trigger("refresh_on_change"), $(document).trigger("convert_to_values"), - select_field.get(0).form.submit(); - }), $(":checkbox[refresh_on_change='true']").off("click").click(function() { - var select_field = $(this), select_val = select_field.val(), ref_on_change_vals = select_field.attr("refresh_on_change_values"); - if (ref_on_change_vals) { - ref_on_change_vals = ref_on_change_vals.split(","); - var last_selected_value = select_field.attr("last_selected_value"); - if (-1 === $.inArray(select_val, ref_on_change_vals) && -1 === $.inArray(last_selected_value, ref_on_change_vals)) return; - } - $(window).trigger("refresh_on_change"), select_field.get(0).form.submit(); - }), $("a[confirm]").off("click").click(function() { - return confirm($(this).attr("confirm")); - }); -} - -!function() { - for (var lastTime = 0, vendors = [ "ms", "moz", "webkit", "o" ], x = 0; x < vendors.length && !window.requestAnimationFrame; ++x) window.requestAnimationFrame = window[vendors[x] + "RequestAnimationFrame"], - window.cancelRequestAnimationFrame = window[vendors[x] + "CancelRequestAnimationFrame"]; - window.requestAnimationFrame || (window.requestAnimationFrame = function(callback) { - var currTime = new Date().getTime(), timeToCall = Math.max(0, 16 - (currTime - lastTime)), id = window.setTimeout(function() { - callback(currTime + timeToCall); - }, timeToCall); - return lastTime = currTime + timeToCall, id; - }), window.cancelAnimationFrame || (window.cancelAnimationFrame = function(id) { - clearTimeout(id); - }); -}(), Array.indexOf || (Array.prototype.indexOf = function(obj) { - for (var i = 0, len = this.length; len > i; i++) if (this[i] == obj) return i; - return -1; -}), $.fn.makeAbsolute = function(rebase) { - return this.each(function() { - var el = $(this), pos = el.position(); - el.css({ - position: "absolute", - marginLeft: 0, - marginTop: 0, - top: pos.top, - left: pos.left, - right: $(window).width() - (pos.left + el.width()) - }), rebase && el.remove().appendTo("body"); - }); -}, $.fn.refresh_select2 = function() { - var select_elt = $(this), options = { - placeholder: "Click to select", - closeOnSelect: !select_elt.is("[MULTIPLE]"), - dropdownAutoWidth: !0, - containerCssClass: "select2-minwidth" - }; - return select_elt.select2(options); -}, $.fn.make_text_editable = function(config_dict) { - var num_cols = "num_cols" in config_dict ? config_dict.num_cols : 30, num_rows = "num_rows" in config_dict ? config_dict.num_rows : 4, use_textarea = "use_textarea" in config_dict ? config_dict.use_textarea : !1, on_finish = "on_finish" in config_dict ? config_dict.on_finish : null, help_text = "help_text" in config_dict ? config_dict.help_text : null, container = $(this); - return container.addClass("editable-text").click(function(e) { - if (!($(this).children(":input").length > 0)) { - container.removeClass("editable-text"); - var input_elt, button_elt, set_text = function(new_text) { - container.find(":input").remove(), "" !== new_text ? container.text(new_text) : container.html("
    "), - container.addClass("editable-text"), on_finish && on_finish(new_text); - }, cur_text = "cur_text" in config_dict ? config_dict.cur_text : container.text(); - use_textarea ? (input_elt = $("").attr({rows:g,cols:e}).text($.trim(k)):$("").attr({value:$.trim(k),size:e}),a.attr("id","renaming-active"),a.blur(function(){$(this).remove(),j.show(),i&&i(a)}),a.keyup(function(e){if(27===e.keyCode)$(this).trigger("blur");else if(13===e.keyCode){var f={};f[d]=$(this).val(),$(this).trigger("blur"),$.ajax({url:c,data:f,error:function(){alert("Text editing for elt "+b+" failed")},success:function(b){""!==b?j.text(b):j.html("None"),i&&i(a)}})}}),h&&h(a),j.hide(),a.insertAfter(j),a.focus(),a.select()}})}function commatize(a){a+="";for(var b=/(\d+)(\d{3})/;b.test(a);)a=a.replace(b,"$1,$2");return a}function reset_tool_search(a){var b=$("#galaxy_tools").contents();if(0===b.length&&(b=$(document)),$(this).removeClass("search_active"),b.find(".toolTitle").removeClass("search_match"),b.find(".toolSectionBody").hide(),b.find(".toolTitle").show(),b.find(".toolPanelLabel").show(),b.find(".toolSectionWrapper").each(function(){"recently_used_wrapper"!==$(this).attr("id")?$(this).show():$(this).hasClass("user_pref_visible")&&$(this).show()}),b.find("#search-no-results").hide(),b.find("#search-spinner").hide(),a){var c=b.find("#tool-search-query");c.val("search tools")}}function init_refresh_on_change(){$("select[refresh_on_change='true']").off("change").change(function(){var a=$(this),b=a.val(),c=a.attr("refresh_on_change_values");if(c){c=c.split(",");var d=a.attr("last_selected_value");if(-1===$.inArray(b,c)&&-1===$.inArray(d,c))return}$(window).trigger("refresh_on_change"),$(document).trigger("convert_to_values"),a.get(0).form.submit()}),$(":checkbox[refresh_on_change='true']").off("click").click(function(){var a=$(this),b=a.val(),c=a.attr("refresh_on_change_values");if(c){c=c.split(",");var d=a.attr("last_selected_value");if(-1===$.inArray(b,c)&&-1===$.inArray(d,c))return}$(window).trigger("refresh_on_change"),a.get(0).form.submit()}),$("a[confirm]").off("click").click(function(){return confirm($(this).attr("confirm"))})}!function(){for(var a=0,b=["ms","moz","webkit","o"],c=0;cb;b++)if(this[b]==a)return b;return-1}),$.fn.makeAbsolute=function(a){return this.each(function(){var b=$(this),c=b.position();b.css({position:"absolute",marginLeft:0,marginTop:0,top:c.top,left:c.left,right:$(window).width()-(c.left+b.width())}),a&&b.remove().appendTo("body")})},$.fn.refresh_select2=function(){var a=$(this),b={placeholder:"Click to select",closeOnSelect:!a.is("[MULTIPLE]"),dropdownAutoWidth:!0,containerCssClass:"select2-minwidth"};return a.select2(b)},$.fn.make_text_editable=function(a){var b="num_cols"in a?a.num_cols:30,c="num_rows"in a?a.num_rows:4,d="use_textarea"in a?a.use_textarea:!1,e="on_finish"in a?a.on_finish:null,f="help_text"in a?a.help_text:null,g=$(this);return g.addClass("editable-text").click(function(f){if(!($(this).children(":input").length>0)){g.removeClass("editable-text");var h,i,j=function(a){g.find(":input").remove(),""!==a?g.text(a):g.html("
    "),g.addClass("editable-text"),e&&e(a)},k="cur_text"in a?a.cur_text:g.text();d?(h=$("