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Only check for exit code on actual sort command
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@@ -45,7 +45,7 @@ def main():
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# grep comments
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grep_comments = "(grep '^#' %s) >> %s" % (input, output)
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subprocess.check_call(grep_comments, shell=True)
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subprocess.call(grep_comments, shell=True)
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# grep and sort columns
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sed_header_restore = ""
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