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Migrate NCBI Blast+ (and blastxml) to the toolshed.

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Dannon Baker
2012-08-17 11:35:31 -04:00
parent 9fabf5dfbe
commit 3d5fd7b5e2
5 changed files with 28 additions and 123 deletions
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scripts/migrate_tools/0004_tools.sh
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#!/bin/sh
cd `dirname $0`/../..
python ./scripts/migrate_tools/migrate_tools.py 0004_tools.xml $@
scripts/migrate_tools/0004_tools.xml
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<?xml version="1.0"?>
<toolshed name="toolshed.g2.bx.psu.edu">
<repository name="blast_datatypes" description="Datatypes for BLAST" changeset_revision="e1c29f302301" />
<repository name="ncbi_blast_plus" description="Galaxy wrappers for NCBI BLAST+" changeset_revision="d375502056f1">
<tool id="blastxml_to_tabular" version="0.0.8" file="blastxml_to_tabular.xml"/>
<tool id="ncbi_blastn_wrapper" version="0.0.11" file="ncbi_blastn_wrapper.xml"/>
<tool id="ncbi_blastp_wrapper" version="0.0.11" file="ncbi_blastp_wrapper.xml"/>
<tool id="ncbi_blastx_wrapper" version="0.0.11" file="ncbi_blastx_wrapper.xml"/>
<tool id="ncbi_tblastn_wrapper" version="0.0.11" file="ncbi_tblastn_wrapper.xml"/>
<tool id="ncbi_tblastx_wrapper" version="0.0.11" file="ncbi_tblastx_wrapper.xml"/>
</repository>
</toolshed>