opensource/galaxy
3
0
Fork 0
mirror of https://github.com/galaxyproject/galaxy.git synced 2026-09-24 16:30:27 +08:00
Code Issues Packages Projects Releases Wiki Activity

Merge pull request #3399 from jmchilton/markdown

Browse Source 
Markdown datatype support.
This commit is contained in:
Eric Rasche
2017-01-11 00:21:12 +00:00
committed by GitHub
parent 6c4dff3f46 ca40f984b0
commit 3c494c42e2
15 changed files with 2699 additions and 2 deletions
Download Patch File Download Diff File Expand all files Collapse all files
test/functional/tools/creates_html.xml
+14
View File
@@ -0,0 +1,14 @@
<tool id="creates_html" name="creates_html" version="1.0.0" profile="16.04">
<command>
mkdir '$output.extra_files_path';
cp '$__tool_directory__/creates_html_index.html' '$output';
cp '$__tool_directory__/creates_html_image.png' '$output.extra_files_path/image.png';
</command>
<inputs>
<param name="inttest" type="integer" value="7" />
</inputs>
<outputs>
<data format="html" name="output" label="Output HTML">
</data>
</outputs>
</tool>
test/functional/tools/creates_html_index.html
+12
View File
@@ -0,0 +1,12 @@
<html>
<body>
<p>Hello World!</p>
<p>Some of this sentence is <b>bold</b> and some is <i>italic</i>.</p>
<ul>
<li>A list element.</li>
<li>Another list element.</li>
<li>Last list element.</li>
</ul>
<img src="image.png" alt="An Image">
</body>
</html>
test/functional/tools/creates_markdown.xml
+14
View File
@@ -0,0 +1,14 @@
<tool id="creates_markdown" name="creates_markdown" version="1.0.0" profile="16.04">
<command>
mkdir '$output.extra_files_path';
cp '$__tool_directory__/creates_markdown_index.md' '$output';
cp '$__tool_directory__/creates_html_image.png' '$output.extra_files_path/image.png'
</command>
<inputs>
<param name="inttest" type="integer" value="7" />
</inputs>
<outputs>
<data format="markdown" name="output" label="Output Markdown">
</data>
</outputs>
</tool>
test/functional/tools/creates_markdown_index.md
+9
View File
@@ -0,0 +1,9 @@
Hello World!
Some of this sentence is **bold** and some is *italic*.
* A list element.
* Another list element.
* Last list element.
![An Image](image.png)
test/functional/tools/sample_datatypes_conf.xml
+2
View File
@@ -18,5 +18,7 @@
<datatype extension="biom1" type="galaxy.datatypes.text:Biom1" display_in_upload="True" subclass="True" mimetype="application/json"/>
<datatype extension="bed" type="galaxy.datatypes.interval:Bed" display_in_upload="true" description="BED format provides a flexible way to define the data lines that are displayed in an annotation track. BED lines have three required columns and nine additional optional columns. The three required columns are chrom, chromStart and chromEnd." description_url="https://wiki.galaxyproject.org/Learn/Datatypes#Bed">
</datatype>
<datatype extension="html" type="galaxy.datatypes.text:Html" mimetype="text/html"/>
<datatype extension="markdown" type="galaxy.datatypes.text:Markdown" mimetype="text/markdown"/>
</registration>
</datatypes>
test/functional/tools/samples_tool_conf.xml
+2
View File
@@ -3,6 +3,8 @@
<tool file="upload.xml"/>
<tool file="simple_constructs.xml" />
<tool file="color_param.xml" />
<tool file="creates_html.xml" />
<tool file="creates_markdown.xml" />
<tool file="inheritance_simple.xml" />
<tool file="boolean_conditional.xml" />
<tool file="composite.xml" />