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restructure tests

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- put them all in one test tool
- and add other select parameter types
This commit is contained in:
Matthias Bernt
2021-12-16 09:55:12 +01:00
parent defbfbe8cf
commit 34cd037df3
3 changed files with 35 additions and 33 deletions
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test/functional/tools/select_optional.xml
+35 -6
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@@ -1,11 +1,24 @@
<tool id="select_optional" name="Optional select" version="1.0.0" profile="20.01">
<command><![CDATA[
echo $select_opt > '$output1' &&
echo $select_mult_opt
echo select_opt $select_opt >> '$output1' &&
echo select_mult_opt $select_mult_opt >> '$output1' &&
echo col_opt $col_opt >> '$output1' &&
echo col_mult_opt $col_mult_opt >> '$output1' &&
echo groups_opt $groups_opt >> '$output1' &&
echo groups_mult_opt $groups_mult_opt >> '$output1' &&
echo build_opt $build_opt >> '$output1' &&
echo build_mult_opt $build_mult_opt >> '$output1'
]]></command>
<inputs>
<!-- verify that it is possible to have an optional column parameter
an specify no options-->
<!-- verify that it is possible to select no options
for optional select parameters with dynamic
options mn parameter
- select
- data_column
- group_tag
- genomebuild
-->
<param name="select_opt" type="select" optional="true">
<options from_data_table="test_fasta_indexes">
<column name="value" index="0"/>
@@ -24,6 +37,16 @@
<filter type="remove_value" value="mm10_value"/>
</options>
</param>
<param name="input1" type="data" format="tabular" optional="true" label="Input 1" />
<param name="col_opt" type="data_column" data_ref="input1" optional="true"/>
<param name="col_mult_opt" type="data_column" data_ref="input1" multiple="true" optional="true"/>
<param name="groups_opt" type="group_tag" data_ref="input1" optional="true"/>
<param name="groups_mult_opt" type="group_tag" data_ref="input1" multiple="true" optional="true"/>
<param name="build_opt" type="genomebuild" optional="true"/>
<param name="build_mult_opt" type="genomebuild" multiple="true" optional="true"/>
</inputs>
<outputs>
<data name="output1" format="tabular" />
@@ -32,8 +55,14 @@
<test>
<output name="output1">
<assert_contents>
<has_line line="None" />
<has_line line="" />
<has_line line="select_opt None" />
<has_line line="select_mult_opt None" />
<has_line line="col_opt None" />
<has_line line="col_mult_opt None" />
<has_line line="groups_opt None" />
<has_line line="groups_mult_opt None" />
<has_line line="build_opt None" />
<has_line line="build_mult_opt None" />
</assert_contents>
</output>
</test>