diff --git a/templates/base_panels.mako b/templates/base_panels.mako
index f303a1197e9..fa3dc5db66f 100644
--- a/templates/base_panels.mako
+++ b/templates/base_panels.mako
@@ -167,12 +167,17 @@
+ |
+ Cite
+ |
+
+
User
<%
@@ -282,7 +287,7 @@
-
+
## Background displays first
## Layer iframes over backgrounds
diff --git a/tools/fastx_toolkit/fastq_to_fasta.xml b/tools/fastx_toolkit/fastq_to_fasta.xml
index fcde683f6df..fe4496f0ed9 100644
--- a/tools/fastx_toolkit/fastq_to_fasta.xml
+++ b/tools/fastx_toolkit/fastq_to_fasta.xml
@@ -3,7 +3,7 @@
gunzip -cf $input | fastq_to_fasta $SKIPN $RENAMESEQ -o $output -v
-
+
diff --git a/tools/samtools/pileup_parser.xml b/tools/samtools/pileup_parser.xml
index 29dee0f46ae..571d3750a0e 100644
--- a/tools/samtools/pileup_parser.xml
+++ b/tools/samtools/pileup_parser.xml
@@ -1,5 +1,5 @@
-
- to find variants
+
+ on coverage and SNPs
#if $pileup_type.type_select == "six": #pileup_parser.pl $input "3" "5" "6" "4" $qv_cutoff $cvrg_cutoff $snps_only $interval "2" $out_file1
#elif $pileup_type.type_select == "ten": #pileup_parser.pl $input "3" "9" "10" "8" $qv_cutoff $cvrg_cutoff $snps_only $interval "2" $out_file1
diff --git a/tools/samtools/sam_pileup.xml b/tools/samtools/sam_pileup.xml
index e4bd9ed2101..e2084dafc0e 100644
--- a/tools/samtools/sam_pileup.xml
+++ b/tools/samtools/sam_pileup.xml
@@ -1,5 +1,5 @@
-
- generates the pileup format for a provided BAM file
+
+ from BAM dataset
sam_pileup.py
--input1=$input1
diff --git a/universe_wsgi.ini.sample b/universe_wsgi.ini.sample
index 6b6b48f405f..97bee1de93e 100644
--- a/universe_wsgi.ini.sample
+++ b/universe_wsgi.ini.sample
@@ -102,9 +102,11 @@ static_style_dir = %(here)s/static/june_2007_style/blue
## Brand: appends "/[brand]" to the "Galaxy" text in the masthead
## wiki_url: replaces the default galaxy main wiki
## bugs_email: replaces the default galaxy bugs email list
+##citation_url: point to a URL listing citations
#brand = Private local mirror
#wiki_url = /path/to/my/local/wiki
#bugs_email = mailto:galaxy-bugs@example.org
+#citation_url = /path/to/my/citations
# ---- Logging and Debugging ------------------------------------------------
|