From 1cfcf5bc1ac58c90b43ec82cf826cd37b128d16c Mon Sep 17 00:00:00 2001
From: Jeremy Goecks <jeremy.goecks@emory.edu>
Date: Tue, 6 Aug 2013 10:59:43 -0400
Subject: [PATCH] Add requirements tags to tophat wrapper.

---
 tools/ngs_rna/tophat_wrapper.xml | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/tools/ngs_rna/tophat_wrapper.xml b/tools/ngs_rna/tophat_wrapper.xml
index 56fdf30e359..a8961fe98a4 100644
--- a/tools/ngs_rna/tophat_wrapper.xml
+++ b/tools/ngs_rna/tophat_wrapper.xml
@@ -3,6 +3,8 @@
     <description>Find splice junctions using RNA-seq data</description>
     <version_command>tophat --version</version_command>
     <requirements>
+        <requirement type="package">samtools</requirement>
+        <requirement type="package">bowtie</requirement>
         <requirement type="package">tophat</requirement>
     </requirements>
     <command interpreter="python">