',
'<% if (!item.get("is_unrestricted")) { %>',
- '
',
diff --git a/client/galaxy/scripts/mvc/library/library-folderlist-view.js b/client/galaxy/scripts/mvc/library/library-folderlist-view.js
index 694de517443..4d7bfa86b65 100644
--- a/client/galaxy/scripts/mvc/library/library-folderlist-view.js
+++ b/client/galaxy/scripts/mvc/library/library-folderlist-view.js
@@ -467,11 +467,12 @@ define(
'
",
"",
diff --git a/client/galaxy/scripts/mvc/library/library-folderrow-view.js b/client/galaxy/scripts/mvc/library/library-folderrow-view.js
index 2cef1d8cc61..8a391714ce4 100644
--- a/client/galaxy/scripts/mvc/library/library-folderrow-view.js
+++ b/client/galaxy/scripts/mvc/library/library-folderrow-view.js
@@ -17,10 +17,10 @@ define(
defaults: {
type: null,
visibility_config: {
- edit_folder_btn: true,
+ edit_folder_btn: false,
save_folder_btn: false,
cancel_folder_btn: false,
- permission_folder_btn: true
+ permission_folder_btn: false
},
edit_mode: false
},
@@ -306,32 +306,31 @@ define(
"
",
"<% } else if(edit_mode){ %>",
'
",
""
@@ -439,11 +447,11 @@ define(
"
",
""
diff --git a/client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js b/client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js
index fa3c358415a..c4ffaa5025d 100644
--- a/client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js
+++ b/client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js
@@ -112,7 +112,10 @@ define(
show_page: parseInt(this.options.show_page),
page_count: parseInt(this.options.page_count),
total_items_count: this.options.total_items_count,
- items_shown: this.options.items_shown
+ items_shown: this.options.items_shown,
+ folder_page_size: Galaxy.libraries.preferences.get(
+ "folder_page_size"
+ )
})
);
},
@@ -1432,7 +1435,8 @@ define(
/**
* Show user the prompt to change the number of items shown on page.
*/
- showPageSizePrompt: function() {
+ showPageSizePrompt: function(e) {
+ e.preventDefault();
var folder_page_size = prompt(
"How many items per page do you want to see?",
Galaxy.libraries.preferences.get("folder_page_size")
@@ -1886,11 +1890,10 @@ define(
"<% } %>",
"",
"
"
].join("")
);
diff --git a/client/galaxy/scripts/mvc/library/library-libraryrow-view.js b/client/galaxy/scripts/mvc/library/library-libraryrow-view.js
index 951d395c6da..47531c39cfb 100644
--- a/client/galaxy/scripts/mvc/library/library-libraryrow-view.js
+++ b/client/galaxy/scripts/mvc/library/library-libraryrow-view.js
@@ -264,7 +264,7 @@ define(["layout/masthead", "utils/utils", "libs/toastr"], function(
'
"
].join("")
diff --git a/client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js b/client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js
index 5d008d4bcca..ef599d1026a 100644
--- a/client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js
+++ b/client/galaxy/scripts/mvc/library/library-librarytoolbar-view.js
@@ -17,7 +17,7 @@ define(["libs/toastr", "mvc/library/library-model"], function(
"click #create_new_library_btn": "createLibraryFromModal",
"click #include_deleted_chk": "includeDeletedChecked",
"click #exclude_restricted_chk": "excludeRestrictedChecked",
- "click #lib_page_size_prompt": "showPageSizePrompt",
+ "click .page_size_prompt": "showPageSizePrompt",
"keyup .library-search-input": "searchLibraries"
},
@@ -64,7 +64,10 @@ define(["libs/toastr", "mvc/library/library-model"], function(
show_page: parseInt(this.options.show_page),
page_count: parseInt(this.options.page_count),
total_libraries_count: this.options.total_libraries_count,
- libraries_shown: this.options.libraries_shown
+ libraries_shown: this.options.libraries_shown,
+ library_page_size: Galaxy.libraries.preferences.get(
+ "library_page_size"
+ )
})
);
},
@@ -128,7 +131,8 @@ define(["libs/toastr", "mvc/library/library-model"], function(
/**
* Show user the propmpt to change the number of libs shown on page.
*/
- showPageSizePrompt: function() {
+ showPageSizePrompt: function(e) {
+ e.preventDefault();
var library_page_size = prompt(
"How many libraries per page do you want to see?",
Galaxy.libraries.preferences.get("library_page_size")
@@ -281,8 +285,11 @@ define(["libs/toastr", "mvc/library/library-model"], function(
'
',
"<% } %>",
"",
- '
',
- ' showing <%- libraries_shown %> of <%- total_libraries_count %> libraries',
+ "",
+ ' <%- libraries_shown %> libraries shown (change) ',
+ " ",
+ "",
+ " <%- total_libraries_count %> total",
" "
].join("")
);
diff --git a/client/galaxy/style/less/library.less b/client/galaxy/style/less/library.less
index 91614c3a048..ccebc0e528c 100644
--- a/client/galaxy/style/less/library.less
+++ b/client/galaxy/style/less/library.less
@@ -11,7 +11,7 @@ overflow: auto !important;
.fa{
font-size: 12px;
}
-.fa-globe{
+.fa-globe, .fa-shield, .fa-key, .fa-ban{
font-size: initial;
margin-left: 0.6em;
}
diff --git a/lib/galaxy/managers/library_datasets.py b/lib/galaxy/managers/library_datasets.py
index 20ce8c3789a..115f3cb66e8 100644
--- a/lib/galaxy/managers/library_datasets.py
+++ b/lib/galaxy/managers/library_datasets.py
@@ -195,17 +195,26 @@ class LibraryDatasetsManager(object):
if len(expired_ldda_versions) > 0:
rval['has_versions'] = True
rval['expired_versions'] = expired_ldda_versions
+
+ ldda = ld.library_dataset_dataset_association
+ if ldda.creating_job_associations:
+ if ldda.creating_job_associations[0].job.stdout:
+ rval['job_stdout'] = ldda.creating_job_associations[0].job.stdout.strip()
+ if ldda.creating_job_associations[0].job.stderr:
+ rval['job_stderr'] = ldda.creating_job_associations[0].job.stderr.strip()
+ if ldda.dataset.uuid:
+ rval['uuid'] = str(ldda.dataset.uuid)
rval['deleted'] = ld.deleted
rval['folder_id'] = 'F' + rval['folder_id']
rval['full_path'] = full_path
- rval['file_size'] = util.nice_size(int(ld.library_dataset_dataset_association.get_size()))
- rval['date_uploaded'] = ld.library_dataset_dataset_association.create_time.strftime("%Y-%m-%d %I:%M %p")
- rval['can_user_modify'] = trans.app.security_agent.can_modify_library_item(current_user_roles, ld) or trans.user_is_admin()
- rval['is_unrestricted'] = trans.app.security_agent.dataset_is_public(ld.library_dataset_dataset_association.dataset)
- rval['tags'] = self.tag_manager.get_tags_str(ld.library_dataset_dataset_association.tags)
+ rval['file_size'] = util.nice_size(int(ldda.get_size()))
+ rval['date_uploaded'] = ldda.create_time.strftime("%Y-%m-%d %I:%M %p")
+ rval['can_user_modify'] = trans.user_is_admin() or trans.app.security_agent.can_modify_library_item(current_user_roles, ld)
+ rval['is_unrestricted'] = trans.app.security_agent.dataset_is_public(ldda.dataset)
+ rval['tags'] = self.tag_manager.get_tags_str(ldda.tags)
# Manage dataset permission is always attached to the dataset itself, not the the ld or ldda to maintain consistency
- rval['can_user_manage'] = trans.app.security_agent.can_manage_dataset(current_user_roles, ld.library_dataset_dataset_association.dataset) or trans.user_is_admin()
+ rval['can_user_manage'] = trans.user_is_admin() or trans.app.security_agent.can_manage_dataset(current_user_roles, ldda.dataset)
return rval
def _build_path(self, trans, folder):
diff --git a/lib/galaxy/webapps/galaxy/api/folder_contents.py b/lib/galaxy/webapps/galaxy/api/folder_contents.py
index 3ff8c2e0629..63ff60d4564 100644
--- a/lib/galaxy/webapps/galaxy/api/folder_contents.py
+++ b/lib/galaxy/webapps/galaxy/api/folder_contents.py
@@ -109,6 +109,7 @@ class FolderContentsController(BaseAPIController, UsesLibraryMixin, UsesLibraryM
is_unrestricted=is_unrestricted,
is_private=is_private,
can_manage=can_manage,
+ state=library_dataset_dict['state'],
file_size=nice_size))
if content_item.library_dataset_dataset_association.message:
return_item.update(dict(message=content_item.library_dataset_dataset_association.message))
diff --git a/static/maps/mvc/library/library-dataset-view.js.map b/static/maps/mvc/library/library-dataset-view.js.map
index 025124c3906..48ff6ceb1f6 100644
--- a/static/maps/mvc/library/library-dataset-view.js.map
+++ b/static/maps/mvc/library/library-dataset-view.js.map
@@ -1 +1 @@
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[\n \"libs/toastr\",\n \"mvc/library/library-model\",\n \"utils/utils\",\n \"mvc/ui/ui-select\"\n ],\n function(mod_toastr, mod_library_model, mod_utils, mod_select) {\n var LibraryDatasetView = Backbone.View.extend({\n el: \"#center\",\n\n model: null,\n\n options: {},\n\n defaults: {\n edit_mode: false\n },\n\n events: {\n \"click .toolbtn_modify_dataset\": \"enableModification\",\n \"click .toolbtn_cancel_modifications\": \"render\",\n \"click .toolbtn-download-dataset\": \"downloadDataset\",\n \"click .toolbtn-import-dataset\": \"importIntoHistory\",\n \"click .copy-link-to-clipboard\": \"copyToClipboard\",\n \"click .make-private\": \"makeDatasetPrivate\",\n \"click .remove-restrictions\": \"removeDatasetRestrictions\",\n \"click .toolbtn_save_permissions\": \"savePermissions\",\n \"click .toolbtn_save_modifications\": \"saveModifications\"\n },\n\n // genome select\n select_genome: null,\n\n // extension select\n select_extension: null,\n\n // extension types\n list_extensions: [],\n\n // datatype placeholder for extension auto-detection\n auto: {\n id: \"auto\",\n text: \"Auto-detect\",\n description:\n \"This system will try to detect the file type automatically.\" +\n \" If your file is not detected properly as one of the known formats,\" +\n \" it most likely means that it has some format problems (e.g., different\" +\n \" number of columns on different rows). You can still coerce the system\" +\n \" to set your data to the format you think it should be.\" +\n \" You can also upload compressed files, which will automatically be decompressed.\"\n },\n\n // genomes\n list_genomes: [],\n\n initialize: function(options) {\n this.options = _.extend(this.options, options);\n this.fetchExtAndGenomes();\n if (this.options.id) {\n this.fetchDataset();\n }\n },\n\n fetchDataset: function(options) {\n this.options = _.extend(this.options, options);\n this.model = new mod_library_model.Item({\n id: this.options.id\n });\n var that = this;\n this.model.fetch({\n success: function() {\n if (that.options.show_permissions) {\n that.showPermissions();\n } else if (that.options.show_version) {\n that.fetchVersion();\n } else {\n that.render();\n }\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(\n response.responseJSON.err_msg +\n \" Click this to go back.\",\n \"\",\n {\n onclick: function() {\n Galaxy.libraries.library_router.back();\n }\n }\n );\n } else {\n mod_toastr.error(\n \"An error occurred. Click this to go back.\",\n \"\",\n {\n onclick: function() {\n Galaxy.libraries.library_router.back();\n }\n }\n );\n }\n }\n });\n },\n\n render: function(options) {\n this.options = _.extend(this.options, options);\n $(\".tooltip\").remove();\n var template = this.templateDataset();\n this.$el.html(template({ item: this.model }));\n $(\".peek\").html(this.model.get(\"peek\"));\n $(\"#center [data-toggle]\").tooltip();\n },\n\n fetchVersion: function(options) {\n this.options = _.extend(this.options, options);\n that = this;\n if (!this.options.ldda_id) {\n this.render();\n mod_toastr.error(\n \"Library dataset version requested but no id provided.\"\n );\n } else {\n this.ldda = new mod_library_model.Ldda({\n id: this.options.ldda_id\n });\n this.ldda.url =\n this.ldda.urlRoot +\n this.model.id +\n \"/versions/\" +\n this.ldda.id;\n this.ldda.fetch({\n success: function() {\n that.renderVersion();\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\"An error occurred.\");\n }\n }\n });\n }\n },\n\n renderVersion: function() {\n $(\".tooltip\").remove();\n var template = this.templateVersion();\n this.$el.html(template({ item: this.model, ldda: this.ldda }));\n $(\".peek\").html(this.ldda.get(\"peek\"));\n },\n\n enableModification: function() {\n $(\".tooltip\").remove();\n var template = this.templateModifyDataset();\n this.$el.html(template({ item: this.model }));\n this.renderSelectBoxes({\n genome_build: this.model.get(\"genome_build\"),\n file_ext: this.model.get(\"file_ext\")\n });\n $(\".peek\").html(this.model.get(\"peek\"));\n $(\"#center [data-toggle]\").tooltip();\n },\n\n downloadDataset: function() {\n var url =\n Galaxy.root +\n \"api/libraries/datasets/download/uncompressed\";\n var data = { ld_ids: this.id };\n this.processDownload(url, data);\n },\n\n processDownload: function(url, data, method) {\n //url and data options required\n if (url && data) {\n //data can be string of parameters or array/object\n data = typeof data == \"string\" ? data : $.param(data);\n //split params into form inputs\n var inputs = \"\";\n $.each(data.split(\"&\"), function() {\n var pair = this.split(\"=\");\n inputs +=\n '',\n '
\",\n\n // BREADCRUMBS\n '
',\n 'Libraries \"><%- path_item[1] %> <%- path_item[1] %> \",\n\n '<% if (item.get(\"is_unrestricted\")) { %>',\n \"
\",\n 'This dataset is unrestricted so everybody with the link can access it. Just share
this page .',\n \"
\",\n \"<% } %>\",\n\n // TABLE START\n '
',\n '
',\n \"\",\n '\">Name ',\n '<%= _.escape(item.get(\"name\")) %> ',\n \" \",\n '<% if (item.get(\"file_ext\")) { %>',\n \"\",\n 'Data type ',\n '<%= _.escape(item.get(\"file_ext\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"genome_build\")) { %>',\n \"\",\n 'Genome build ',\n '<%= _.escape(item.get(\"genome_build\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"file_size\")) { %>',\n \"\",\n 'Size ',\n '<%= _.escape(item.get(\"file_size\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"date_uploaded\")) { %>',\n \"\",\n 'Date uploaded (UTC) ',\n '<%= _.escape(item.get(\"date_uploaded\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"uploaded_by\")) { %>',\n \"\",\n 'Uploaded by ',\n '<%= _.escape(item.get(\"uploaded_by\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"metadata_data_lines\")) { %>',\n \"\",\n 'Data Lines ',\n '<%= _.escape(item.get(\"metadata_data_lines\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"metadata_comment_lines\")) { %>',\n \"\",\n 'Comment Lines ',\n '<%= _.escape(item.get(\"metadata_comment_lines\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"metadata_columns\")) { %>',\n \"\",\n 'Number of Columns ',\n '<%= _.escape(item.get(\"metadata_columns\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"metadata_column_types\")) { %>',\n \"\",\n 'Column Types ',\n '<%= _.escape(item.get(\"metadata_column_types\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"message\")) { %>',\n \"\",\n 'Message ',\n '<%= _.escape(item.get(\"message\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"misc_blurb\")) { %>',\n \"\",\n 'Misc. blurb ',\n '<%= _.escape(item.get(\"misc_blurb\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"misc_info\")) { %>',\n \"\",\n 'Misc. info ',\n '<%= _.escape(item.get(\"misc_info\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"tags\")) { %>',\n \"\",\n 'Tags ',\n '<%= _.escape(item.get(\"tags\")) %> ',\n \" \",\n \"<% } %>\",\n \"
\",\n\n \"
\",\n\n '<% if (item.get(\"has_versions\")) { %>',\n \"
\",\n \"
Expired versions: \",\n \"
\",\n \"<% } %>\",\n // TABLE END\n \"
\",\n // CONTAINER END\n \"
',\n '
\",\n\n // BREADCRUMBS\n '
',\n 'Libraries \"><%- path_item[1] %> <%- path_item[1] %> \",\n\n '
This is an expired version of the library dataset: <%= _.escape(item.get(\"name\")) %>
',\n // DATASET START\n '
',\n '
',\n \"\",\n '\">Name ',\n '<%= _.escape(ldda.get(\"name\")) %> ',\n \" \",\n '<% if (ldda.get(\"file_ext\")) { %>',\n \"\",\n 'Data type ',\n '<%= _.escape(ldda.get(\"file_ext\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"genome_build\")) { %>',\n \"\",\n 'Genome build ',\n '<%= _.escape(ldda.get(\"genome_build\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"file_size\")) { %>',\n \"\",\n 'Size ',\n '<%= _.escape(ldda.get(\"file_size\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"date_uploaded\")) { %>',\n \"\",\n 'Date uploaded (UTC) ',\n '<%= _.escape(ldda.get(\"date_uploaded\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"uploaded_by\")) { %>',\n \"\",\n 'Uploaded by ',\n '<%= _.escape(ldda.get(\"uploaded_by\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"metadata_data_lines\")) { %>',\n \"\",\n 'Data Lines ',\n '<%= _.escape(ldda.get(\"metadata_data_lines\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"metadata_comment_lines\")) { %>',\n \"\",\n 'Comment Lines ',\n '<%= _.escape(ldda.get(\"metadata_comment_lines\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"metadata_columns\")) { %>',\n \"\",\n 'Number of Columns ',\n '<%= _.escape(ldda.get(\"metadata_columns\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"metadata_column_types\")) { %>',\n \"\",\n 'Column Types ',\n '<%= _.escape(ldda.get(\"metadata_column_types\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"message\")) { %>',\n \"\",\n 'Message ',\n '<%= _.escape(ldda.get(\"message\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"misc_blurb\")) { %>',\n \"\",\n 'Miscellaneous blurb ',\n '<%= _.escape(ldda.get(\"misc_blurb\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"misc_info\")) { %>',\n \"\",\n 'Miscellaneous information ',\n '<%= _.escape(ldda.get(\"misc_info\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"tags\")) { %>',\n \"\",\n 'Tags ',\n '<%= _.escape(item.get(\"tags\")) %> ',\n \" \",\n \"<% } %>\",\n \"
\",\n \"
\",\n // DATASET END\n \"
\",\n // CONTAINER END\n \"
',\n '
',\n '',\n ' \",\n '',\n ' \",\n \"
\",\n\n // BREADCRUMBS\n '
',\n 'Libraries \"><%- path_item[1] %> <%- path_item[1] %> \",\n\n '
',\n '
',\n \"\",\n '\">Name ',\n ' \",\n \"\",\n 'Data type ',\n \"\",\n ' \",\n \" \",\n \"\",\n 'Genome build ',\n \"\",\n ' \",\n \" \",\n \"\",\n 'Size ',\n '<%= _.escape(item.get(\"file_size\")) %> ',\n \" \",\n \"\",\n 'Date uploaded (UTC) ',\n '<%= _.escape(item.get(\"date_uploaded\")) %> ',\n \" \",\n \"\",\n 'Uploaded by ',\n '<%= _.escape(item.get(\"uploaded_by\")) %> ',\n \" \",\n '',\n 'Data Lines ',\n '<%= _.escape(item.get(\"metadata_data_lines\")) %> ',\n \" \",\n 'Comment Lines ',\n '<% if (item.get(\"metadata_comment_lines\") === \"\") { %>',\n '<%= _.escape(item.get(\"metadata_comment_lines\")) %> ',\n \"<% } else { %>\",\n 'unknown ',\n \"<% } %>\",\n \"\",\n \"\",\n 'Number of Columns ',\n '<%= _.escape(item.get(\"metadata_columns\")) %> ',\n \" \",\n \"\",\n 'Column Types ',\n '<%= _.escape(item.get(\"metadata_column_types\")) %> ',\n \" \",\n \"\",\n 'Message ',\n '<%= _.escape(item.get(\"message\")) %> ',\n \" \",\n \"\",\n 'Misc. blurb ',\n '<%= _.escape(item.get(\"misc_blurb\")) %> ',\n \" \",\n \"\",\n 'Misc. information ',\n ' \",\n //TODO: add functionality to modify tags here\n '<% if (item.get(\"tags\")) { %>',\n \"\",\n 'Tags ',\n '<%= _.escape(item.get(\"tags\")) %> ',\n \" \",\n \"<% } %>\",\n \"
\",\n \"
\",\n \"
\",\n // CONTAINER END\n \"
',\n '
\",\n\n // BREADCRUMBS\n '
',\n 'Libraries \"><%- path_item[1] %> <%- path_item[1] %> \",\n\n '
Dataset: <%= _.escape(item.get(\"name\")) %> ',\n '
',\n \"<% if (is_admin) { %>\",\n \"You are logged in as an administrator therefore you can manage any dataset on this Galaxy instance. Please make sure you understand the consequences.\",\n \"<% } else { %>\",\n \"You can assign any number of roles to any of the following permission types. However please read carefully the implications of such actions.\",\n \"<% } %>\",\n \"
\",\n '
',\n \"
Library-related permissions \",\n \"
Roles that can modify the library item \",\n '
',\n '
User with any of these roles can modify name, metadata, and other information about this library item.
',\n \"
\",\n \"
Dataset-related permissions \",\n '
Changes made below will affect every library item that was created from this dataset and also every history this dataset is part of.
',\n '<% if (!item.get(\"is_unrestricted\")) { %>',\n '
You can remove all access restrictions
',\n \"<% } else { %>\",\n '
You can make this dataset private
',\n \"<% } %>\",\n \"
Roles that can access the dataset \",\n '
',\n '
',\n \"User has to have all these roles in order to access this dataset.\",\n \" Users without access permission cannot have other permissions on this dataset.\",\n \" If there are no access roles set on the dataset it is considered unrestricted .\",\n \"
\",\n \"
Roles that can manage permissions on the dataset \",\n '
',\n '
',\n \"User with any of these roles can manage permissions of this dataset. If you remove yourself you will lose the ability manage this dataset unless you are an admin.\",\n \"
\",\n '
',\n ' \",\n \"
\",\n // CONTAINER END\n \"
\",\n '
',\n \"Select history: \",\n '',\n \"<% _.each(histories, function(history) { %>\",\n '\"><%= _.escape(history.get(\"name\")) %> ',\n \"<% }); %>\",\n \" \",\n \"
\",\n '
',\n \"or create new: \",\n '
\",\n \"
',\n '
\",\n\n // BREADCRUMBS\n '
',\n 'Libraries \"><%- path_item[1] %> <%- path_item[1] %> \",\n\n '<% if (item.get(\"is_unrestricted\")) { %>',\n \"
\",\n 'This dataset is unrestricted so everybody with the link can access it. Just share
this page .',\n \"
\",\n \"<% } %>\",\n\n // TABLE START\n '
',\n '
',\n \"\",\n '\">Name ',\n '<%= _.escape(item.get(\"name\")) %> ',\n \" \",\n '<% if (item.get(\"file_ext\")) { %>',\n \"\",\n 'Data type ',\n '<%= _.escape(item.get(\"file_ext\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"genome_build\")) { %>',\n \"\",\n 'Genome build ',\n '<%= _.escape(item.get(\"genome_build\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"file_size\")) { %>',\n \"\",\n 'Size ',\n '<%= _.escape(item.get(\"file_size\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"date_uploaded\")) { %>',\n \"\",\n 'Date uploaded (UTC) ',\n '<%= _.escape(item.get(\"date_uploaded\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"uploaded_by\")) { %>',\n \"\",\n 'Uploaded by ',\n '<%= _.escape(item.get(\"uploaded_by\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"metadata_data_lines\")) { %>',\n \"\",\n 'Data Lines ',\n '<%= _.escape(item.get(\"metadata_data_lines\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"metadata_comment_lines\")) { %>',\n \"\",\n 'Comment Lines ',\n '<%= _.escape(item.get(\"metadata_comment_lines\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"metadata_columns\")) { %>',\n \"\",\n 'Number of Columns ',\n '<%= _.escape(item.get(\"metadata_columns\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"metadata_column_types\")) { %>',\n \"\",\n 'Column Types ',\n '<%= _.escape(item.get(\"metadata_column_types\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"message\")) { %>',\n \"\",\n 'Message ',\n '<%= _.escape(item.get(\"message\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"misc_blurb\")) { %>',\n \"\",\n 'Misc. blurb ',\n '<%= _.escape(item.get(\"misc_blurb\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"misc_info\")) { %>',\n \"\",\n 'Misc. info ',\n '<%= _.escape(item.get(\"misc_info\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"tags\")) { %>',\n \"\",\n 'Tags ',\n '<%= _.escape(item.get(\"tags\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if ( item.get(\"uuid\") !== \"ok\" ) { %>',\n \"\",\n 'UUID ',\n '<%= _.escape(item.get(\"uuid\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if ( item.get(\"state\") !== \"ok\" ) { %>',\n \"\",\n 'State ',\n '<%= _.escape(item.get(\"state\")) %> ',\n \" \",\n \"<% } %>\",\n \"
\",\n\n '<% if (item.get(\"job_stderr\")) { %>',\n \"
Job Standard Error \",\n '
',\n '<%= _.escape(item.get(\"job_stderr\")) %>',\n \" \",\n \"<% } %>\",\n\n '<% if (item.get(\"job_stdout\")) { %>',\n \"
Job Standard Output \",\n '
',\n '<%= _.escape(item.get(\"job_stdout\")) %>',\n \" \",\n \"<% } %>\",\n\n \"
\",\n\n '<% if (item.get(\"has_versions\")) { %>',\n \"
\",\n \"
Expired versions: \",\n \"
\",\n \"<% } %>\",\n // TABLE END\n \"
\",\n // CONTAINER END\n \"
',\n '
\",\n\n // BREADCRUMBS\n '
',\n 'Libraries \"><%- path_item[1] %> <%- path_item[1] %> \",\n\n '
This is an expired version of the library dataset: <%= _.escape(item.get(\"name\")) %>
',\n // DATASET START\n '
',\n '
',\n \"\",\n '\">Name ',\n '<%= _.escape(ldda.get(\"name\")) %> ',\n \" \",\n '<% if (ldda.get(\"file_ext\")) { %>',\n \"\",\n 'Data type ',\n '<%= _.escape(ldda.get(\"file_ext\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"genome_build\")) { %>',\n \"\",\n 'Genome build ',\n '<%= _.escape(ldda.get(\"genome_build\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"file_size\")) { %>',\n \"\",\n 'Size ',\n '<%= _.escape(ldda.get(\"file_size\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"date_uploaded\")) { %>',\n \"\",\n 'Date uploaded (UTC) ',\n '<%= _.escape(ldda.get(\"date_uploaded\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"uploaded_by\")) { %>',\n \"\",\n 'Uploaded by ',\n '<%= _.escape(ldda.get(\"uploaded_by\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"metadata_data_lines\")) { %>',\n \"\",\n 'Data Lines ',\n '<%= _.escape(ldda.get(\"metadata_data_lines\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"metadata_comment_lines\")) { %>',\n \"\",\n 'Comment Lines ',\n '<%= _.escape(ldda.get(\"metadata_comment_lines\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"metadata_columns\")) { %>',\n \"\",\n 'Number of Columns ',\n '<%= _.escape(ldda.get(\"metadata_columns\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"metadata_column_types\")) { %>',\n \"\",\n 'Column Types ',\n '<%= _.escape(ldda.get(\"metadata_column_types\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"message\")) { %>',\n \"\",\n 'Message ',\n '<%= _.escape(ldda.get(\"message\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"misc_blurb\")) { %>',\n \"\",\n 'Miscellaneous blurb ',\n '<%= _.escape(ldda.get(\"misc_blurb\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (ldda.get(\"misc_info\")) { %>',\n \"\",\n 'Miscellaneous information ',\n '<%= _.escape(ldda.get(\"misc_info\")) %> ',\n \" \",\n \"<% } %>\",\n '<% if (item.get(\"tags\")) { %>',\n \"\",\n 'Tags ',\n '<%= _.escape(item.get(\"tags\")) %> ',\n \" \",\n \"<% } %>\",\n \"
\",\n \"
\",\n // DATASET END\n \"
\",\n // CONTAINER END\n \"
',\n '
',\n '',\n ' \",\n '',\n ' \",\n \"
\",\n\n // BREADCRUMBS\n '
',\n 'Libraries \"><%- path_item[1] %> <%- path_item[1] %> \",\n\n '
',\n '
',\n \"\",\n '\">Name ',\n ' \",\n \"\",\n 'Data type ',\n \"\",\n ' \",\n \" \",\n \"\",\n 'Genome build ',\n \"\",\n ' \",\n \" \",\n \"\",\n 'Size ',\n '<%= _.escape(item.get(\"file_size\")) %> ',\n \" \",\n \"\",\n 'Date uploaded (UTC) ',\n '<%= _.escape(item.get(\"date_uploaded\")) %> ',\n \" \",\n \"\",\n 'Uploaded by ',\n '<%= _.escape(item.get(\"uploaded_by\")) %> ',\n \" \",\n '',\n 'Data Lines ',\n '<%= _.escape(item.get(\"metadata_data_lines\")) %> ',\n \" \",\n 'Comment Lines ',\n '<% if (item.get(\"metadata_comment_lines\") === \"\") { %>',\n '<%= _.escape(item.get(\"metadata_comment_lines\")) %> ',\n \"<% } else { %>\",\n 'unknown ',\n \"<% } %>\",\n \"\",\n \"\",\n 'Number of Columns ',\n '<%= _.escape(item.get(\"metadata_columns\")) %> ',\n \" \",\n \"\",\n 'Column Types ',\n '<%= _.escape(item.get(\"metadata_column_types\")) %> ',\n \" \",\n \"\",\n 'Message ',\n '<%= _.escape(item.get(\"message\")) %> ',\n \" \",\n \"\",\n 'Misc. blurb ',\n '<%= _.escape(item.get(\"misc_blurb\")) %> ',\n \" \",\n \"\",\n 'Misc. information ',\n ' \",\n //TODO: add functionality to modify tags here\n '<% if (item.get(\"tags\")) { %>',\n \"\",\n 'Tags ',\n '<%= _.escape(item.get(\"tags\")) %> ',\n \" \",\n \"<% } %>\",\n \"
\",\n \"
\",\n \"
\",\n // CONTAINER END\n \"
',\n '
\",\n\n // BREADCRUMBS\n '
',\n 'Libraries \"><%- path_item[1] %> <%- path_item[1] %> \",\n\n '
Dataset: <%= _.escape(item.get(\"name\")) %> ',\n '
',\n \"<% if (is_admin) { %>\",\n \"You are logged in as an administrator therefore you can manage any dataset on this Galaxy instance. Please make sure you understand the consequences.\",\n \"<% } else { %>\",\n \"You can assign any number of roles to any of the following permission types. However please read carefully the implications of such actions.\",\n \"<% } %>\",\n \"
\",\n '
',\n \"
Library-related permissions \",\n \"
Roles that can modify the library item \",\n '
',\n '
User with any of these roles can modify name, metadata, and other information about this library item.
',\n \"
\",\n \"
Dataset-related permissions \",\n '
Changes made below will affect every library item that was created from this dataset and also every history this dataset is part of.
',\n '<% if (!item.get(\"is_unrestricted\")) { %>',\n '
You can remove all access restrictions
',\n \"<% } else { %>\",\n '
You can make this dataset private
',\n \"<% } %>\",\n \"
Roles that can access the dataset \",\n '
',\n '
',\n \"User has to have all these roles in order to access this dataset.\",\n \" Users without access permission cannot have other permissions on this dataset.\",\n \" If there are no access roles set on the dataset it is considered unrestricted .\",\n \"
\",\n \"
Roles that can manage permissions on the dataset \",\n '
',\n '
',\n \"User with any of these roles can manage permissions of this dataset. If you remove yourself you will lose the ability manage this dataset unless you are an admin.\",\n \"
\",\n '
',\n ' \",\n \"
\",\n // CONTAINER END\n \"
\",\n '
',\n \"Select history: \",\n '',\n \"<% _.each(histories, function(history) { %>\",\n '\"><%= _.escape(history.get(\"name\")) %> ',\n \"<% }); %>\",\n \" \",\n \"
\",\n '
',\n \"or create new: \",\n '
\",\n \"
',\n 'Libraries \"><%- path_item[1] %> <%- path_item[1] %> \",\n\n // FOLDER CONTENT\n '\" class=\"grid table table-condensed\">',\n \"\",\n 'name \"> description ',\n 'data type ',\n 'size ',\n 'time updated (UTC) ',\n ' \",\n '',\n '',\n \"\",\n '\" title=\"Go to parent folder\" class=\"btn_open_folder btn btn-default btn-xs\">.. ',\n \" \",\n \" \",\n \" \",\n \"
\",\n '',\n \"This folder is either empty or you do not have proper access permissions to see the contents. If you expected something to show up\",\n ' please consult the
library security wikipage ',\n ' or visit the
Galaxy support site .',\n \"
',\n 'Libraries \"><%- path_item[1] %> <%- path_item[1] %> \",\n\n // FOLDER CONTENT\n '\" class=\"grid table table-condensed\">',\n \"\",\n 'name \"> description ',\n 'data type ',\n 'size ',\n 'time updated (UTC) ',\n 'state ',\n ' \",\n '',\n '',\n \"\",\n '\" title=\"Go to parent folder\" class=\"btn_open_folder btn btn-default btn-xs\">.. ',\n \" \",\n \" \",\n \" \",\n \"
\",\n '',\n \"This folder is either empty or you do not have proper access permissions to see the contents. If you expected something to show up\",\n ' please consult the
library security wikipage ',\n ' or visit the
Galaxy support site .',\n \"
\">',\n \"\",\n ' \",\n '\",\n '\"><%- content_item.get(\"name\") %> ',\n \" \",\n \"\",\n '<%- content_item.get(\"description\") %>',\n \" \",\n \"<% } else if(edit_mode){ %>\",\n 'folder \",\n \"\",\n '<%= _.escape(content_item.get(\"update_time\")) %>',\n \" \",\n \"\",\n \"<% if(edit_mode) { %>\", // start edit mode\n '\">',\n ' \",\n '\">',\n ' \",\n \"<% } else if (!edit_mode){%>\", // start no edit mode\n '\\'\" class=\"primary-button btn-xs edit_folder_btn\" type=\"button\" style=\"<% if(button_config.edit_folder_btn === false) { print(\"display:none;\") } %>\">',\n ' \",\n '/permissions\">',\n '\\'\" style=\"<% if(button_config.permission_folder_btn === false) { print(\"display:none;\") } %>\">',\n ' \",\n \" \",\n \"<% } %>\", //end no edit mode\n \" \",\n \" \"\n ].join(\"\")\n );\n },\n\n templateRowFile: function() {\n return _.template(\n [\n '\">',\n \"\",\n ' \",\n '',\n ' \",\n \"\",\n '/datasets/<%- content_item.id %>\" class=\"library-dataset\">',\n '<%- content_item.get(\"name\") %>',\n \" \",\n \" \",\n '<%- content_item.get(\"message\") %> ',\n '<%= _.escape(content_item.get(\"file_ext\")) %> ',\n '<%= _.escape(content_item.get(\"file_size\")) %> ',\n '<%= _.escape(content_item.get(\"update_time\")) %> ',\n \"\",\n '<% if (content_item.get(\"is_unrestricted\")) { %>',\n '/datasets/<%- content_item.id %>/permissions\">',\n '',\n ' \",\n \" \",\n \"<% } %>\",\n \" \",\n \" \"\n ].join(\"\")\n );\n },\n\n templateRowDeletedFile: function() {\n return _.template(\n [\n '\">',\n \"\",\n ' \",\n \"',\n '<%- content_item.get(\"name\") %>',\n \" \",\n \"\",\n '<%- content_item.get(\"message\") %>',\n \" \",\n \"\",\n '<%= _.escape(content_item.get(\"file_ext\")) %>',\n \" \",\n \"\",\n '<%= _.escape(content_item.get(\"file_size\")) %>',\n \" \",\n \"\",\n '<%= _.escape(content_item.get(\"update_time\")) %>',\n \" \",\n \"\",\n '\" class=\"primary-button btn-xs undelete_dataset_btn\" type=\"button\" style=\"margin-left:1em;\">',\n ' \",\n \" \",\n \" \"\n ].join(\"\")\n );\n },\n\n templateRowDeletedFolder: function() {\n return _.template(\n [\n '\">',\n \"\",\n ' \",\n \"',\n '<%- content_item.get(\"name\") %>',\n \" \",\n \"\",\n '<%- content_item.get(\"description\") %>',\n \" \",\n \"\",\n \"folder\",\n \" \",\n \"\",\n '<%= _.escape(content_item.get(\"update_time\")) %>',\n \" \",\n \"\",\n '\" class=\"primary-button btn-xs undelete_folder_btn\" type=\"button\" style=\"margin-left:1em;\">',\n ' \",\n \" \",\n \" \"\n ].join(\"\")\n );\n }\n });\n\n return {\n FolderRowView: FolderRowView\n };\n }\n);\n"]}
\ No newline at end of file
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[\n \"libs/toastr\",\n \"mvc/library/library-model\",\n \"mvc/library/library-dataset-view\"\n ],\n function(mod_toastr, mod_library_model, mod_library_dataset_view) {\n var FolderRowView = Backbone.View.extend({\n events: {\n \"click .undelete_dataset_btn\": \"undeleteDataset\",\n \"click .undelete_folder_btn\": \"undeleteFolder\",\n \"click .edit_folder_btn\": \"startModifications\",\n \"click .cancel_folder_btn\": \"cancelModifications\",\n \"click .save_folder_btn\": \"saveModifications\"\n },\n\n defaults: {\n type: null,\n visibility_config: {\n edit_folder_btn: false,\n save_folder_btn: false,\n cancel_folder_btn: false,\n permission_folder_btn: false\n },\n edit_mode: false\n },\n\n initialize: function(options) {\n this.options = _.defaults(options || {}, this.defaults);\n this.render(this.options);\n },\n\n render: function(options) {\n this.options = _.extend(this.options, options);\n var folder_item = this.options.model;\n var template = null;\n\n if (\n folder_item.get(\"type\") === \"folder\" ||\n folder_item.get(\"model_class\") === \"LibraryFolder\"\n ) {\n this.options.type = \"folder\";\n this.prepareButtons(folder_item);\n if (folder_item.get(\"deleted\")) {\n template = this.templateRowDeletedFolder();\n } else {\n template = this.templateRowFolder();\n }\n } else if (\n folder_item.get(\"type\") === \"file\" ||\n folder_item.get(\"model_class\") ===\n \"LibraryDatasetDatasetAssociation\" ||\n folder_item.get(\"model_class\") === \"LibraryDataset\"\n ) {\n this.options.type = \"file\";\n if (folder_item.get(\"deleted\")) {\n template = this.templateRowDeletedFile();\n } else {\n template = this.templateRowFile();\n }\n } else {\n Galaxy.emit.error(\"Unknown library item type found.\");\n Galaxy.emit.error(\n folder_item.get(\"type\") ||\n folder_item.get(\"model_class\")\n );\n }\n this.setElement(\n template({\n content_item: folder_item,\n edit_mode: this.options.edit_mode,\n button_config: this.options.visibility_config\n })\n );\n this.$el.show();\n return this;\n },\n\n /**\n * Modify the visibility of buttons for\n * the filling of the row template of a given folder.\n */\n prepareButtons: function(folder) {\n var vis_config = this.options.visibility_config;\n if (this.options.edit_mode === false) {\n vis_config.save_folder_btn = false;\n vis_config.cancel_folder_btn = false;\n if (folder.get(\"deleted\") === true) {\n vis_config.edit_folder_btn = false;\n vis_config.permission_folder_btn = false;\n } else if (folder.get(\"deleted\") === false) {\n vis_config.save_folder_btn = false;\n vis_config.cancel_folder_btn = false;\n if (folder.get(\"can_modify\") === true) {\n vis_config.edit_folder_btn = true;\n }\n if (folder.get(\"can_manage\") === true) {\n vis_config.permission_folder_btn = true;\n }\n }\n } else if (this.options.edit_mode === true) {\n vis_config.edit_folder_btn = false;\n vis_config.permission_folder_btn = false;\n vis_config.save_folder_btn = true;\n vis_config.cancel_folder_btn = true;\n }\n this.options.visibility_config = vis_config;\n },\n\n /* Show the page with dataset details. */\n showDatasetDetails: function() {\n Galaxy.libraries.datasetView = new mod_library_dataset_view.LibraryDatasetView(\n { id: this.id }\n );\n },\n\n /* Undelete the dataset on server and render the row again. */\n undeleteDataset: function(event) {\n $(\".tooltip\").hide();\n var that = this;\n var dataset_id = $(event.target)\n .closest(\"tr\")\n .data(\"id\");\n var dataset = Galaxy.libraries.folderListView.collection.get(\n dataset_id\n );\n dataset.url = dataset.urlRoot + dataset.id + \"?undelete=true\";\n dataset.destroy({\n success: function(model, response) {\n Galaxy.libraries.folderListView.collection.remove(\n dataset_id\n );\n var updated_dataset = new mod_library_model.Item(\n response\n );\n Galaxy.libraries.folderListView.collection.add(\n updated_dataset\n );\n Galaxy.libraries.folderListView.collection.sortByNameAsc();\n mod_toastr.success(\n \"Dataset undeleted. Click this to see it.\",\n \"\",\n {\n onclick: function() {\n var folder_id = that.model.get(\"folder_id\");\n window.location =\n Galaxy.root +\n \"library/list#folders/\" +\n folder_id +\n \"/datasets/\" +\n that.id;\n }\n }\n );\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(\n \"Dataset was not undeleted. \" +\n response.responseJSON.err_msg\n );\n } else {\n mod_toastr.error(\n \"An error occured! Dataset was not undeleted. Please try again.\"\n );\n }\n }\n });\n },\n\n /* Undelete the folder on server and render the row again. */\n undeleteFolder: function(event) {\n $(\".tooltip\").hide();\n var that = this;\n var folder_id = $(event.target)\n .closest(\"tr\")\n .data(\"id\");\n var folder = Galaxy.libraries.folderListView.collection.get(\n folder_id\n );\n folder.url = folder.urlRoot + folder.id + \"?undelete=true\";\n folder.destroy({\n success: function(model, response) {\n Galaxy.libraries.folderListView.collection.remove(\n folder_id\n );\n var updated_folder = new mod_library_model.FolderAsModel(\n response\n );\n Galaxy.libraries.folderListView.collection.add(\n updated_folder\n );\n Galaxy.libraries.folderListView.collection.sortByNameAsc();\n mod_toastr.success(\"Folder undeleted.\");\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(\n \"Folder was not undeleted. \" +\n response.responseJSON.err_msg\n );\n } else {\n mod_toastr.error(\n \"An error occured! Folder was not undeleted. Please try again.\"\n );\n }\n }\n });\n },\n\n /* User clicked the 'edit' button on row so render the row as editable. */\n startModifications: function() {\n this.options.edit_mode = true;\n this.repaint();\n },\n\n /* User clicked the 'cancel' button so render normal row */\n cancelModifications: function() {\n this.options.edit_mode = false;\n this.repaint();\n },\n\n saveModifications: function() {\n var folder = Galaxy.libraries.folderListView.collection.get(\n this.$el.data(\"id\")\n );\n var is_changed = false;\n var new_name = this.$el.find(\".input_folder_name\").val();\n if (\n typeof new_name !== \"undefined\" &&\n new_name !== folder.get(\"name\")\n ) {\n if (new_name.length > 2) {\n folder.set(\"name\", new_name);\n is_changed = true;\n } else {\n mod_toastr.warning(\n \"Folder name has to be at least 3 characters long.\"\n );\n return;\n }\n }\n var new_description = this.$el\n .find(\".input_folder_description\")\n .val();\n if (\n typeof new_description !== \"undefined\" &&\n new_description !== folder.get(\"description\")\n ) {\n folder.set(\"description\", new_description);\n is_changed = true;\n }\n if (is_changed) {\n var row_view = this;\n folder.save(null, {\n patch: true,\n success: function(folder) {\n row_view.options.edit_mode = false;\n row_view.repaint(folder);\n mod_toastr.success(\"Changes to folder saved.\");\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\n \"An error occured while attempting to update the folder.\"\n );\n }\n }\n });\n } else {\n this.options.edit_mode = false;\n this.repaint(folder);\n mod_toastr.info(\"Nothing has changed.\");\n }\n },\n\n repaint: function() {\n /* need to hide manually because of the element removal in setElement\n invoked in render() */\n $(\".tooltip\").hide();\n /* we need to store the old element to be able to replace it with\n new one */\n var old_element = this.$el;\n /* if user canceled the folder param is undefined,\n if user saved and succeeded the updated folder is rendered */\n this.render();\n old_element.replaceWith(this.$el);\n /* now we attach new tooltips to the newly created row element */\n this.$el.find(\"[data-toggle]\").tooltip();\n },\n\n templateRowFolder: function() {\n return _.template(\n [\n '\">',\n \"\",\n ' \",\n '\",\n '\"><%- content_item.get(\"name\") %> ',\n \" \",\n \"\",\n '<%- content_item.get(\"description\") %>',\n \" \",\n \"folder \",\n \"\",\n '<%= _.escape(content_item.get(\"update_time\")) %>',\n \" \",\n \"\",\n \"<% if(edit_mode) { %>\", // start edit mode\n '\">',\n ' \",\n '\">',\n ' \",\n \"<% } else if (!edit_mode){%>\", // start no edit mode\n '\\'\" class=\"primary-button btn-xs edit_folder_btn\" type=\"button\" style=\"<% if(button_config.edit_folder_btn === false) { print(\"display:none;\") } %>\">',\n ' \",\n '/permissions\">',\n '\\'\" style=\"<% if(button_config.permission_folder_btn === false) { print(\"display:none;\") } %>\">',\n ' \",\n \" \",\n \"<% } %>\", //end no edit mode\n \" \",\n \" \"\n ].join(\"\")\n );\n },\n\n templateRowFile: function() {\n return _.template(\n [\n '\">',\n \"\",\n ' \",\n '',\n ' \",\n \"\",\n '/datasets/<%- content_item.id %>\" class=\"library-dataset\">',\n '<%- content_item.get(\"name\") %>',\n \" \",\n \" \",\n '<%- content_item.get(\"message\") %> ',\n '<%= _.escape(content_item.get(\"file_ext\")) %> ',\n '<%= _.escape(content_item.get(\"file_size\")) %> ',\n '<%= _.escape(content_item.get(\"update_time\")) %> ',\n \"\",\n '<% if ( content_item.get(\"state\") !== \"ok\" ) { %>',\n '<%= _.escape(content_item.get(\"state\")) %>',\n \"<% } %>\",\n \" \",\n \"\",\n '<% if (content_item.get(\"is_unrestricted\")) { %>',\n '/datasets/<%- content_item.id %>/permissions\">',\n '\\'\">',\n ' \",\n \" \",\n \"<% } %>\",\n \" \",\n \" \"\n ].join(\"\")\n );\n },\n\n templateRowDeletedFile: function() {\n return _.template(\n [\n '\">',\n \"\",\n ' \",\n \"',\n '<%- content_item.get(\"name\") %>',\n \" \",\n \"\",\n '<%- content_item.get(\"message\") %>',\n \" \",\n \"\",\n '<%= _.escape(content_item.get(\"file_ext\")) %>',\n \" \",\n \"\",\n '<%= _.escape(content_item.get(\"file_size\")) %>',\n \" \",\n \"\",\n '<%= _.escape(content_item.get(\"update_time\")) %>',\n \" \",\n \"\",\n '<% if ( content_item.get(\"state\") !== \"ok\" ) { %>',\n '<%= _.escape(content_item.get(\"state\")) %>',\n \"<% } %>\",\n \" \",\n \"\",\n '\\'\" class=\"primary-button btn-xs undelete_dataset_btn\" type=\"button\" style=\"margin-left:1em;\">',\n ' \",\n \" \",\n \" \"\n ].join(\"\")\n );\n },\n\n templateRowDeletedFolder: function() {\n return _.template(\n [\n '\">',\n \"\",\n ' \",\n \"',\n '<%- content_item.get(\"name\") %>',\n \" \",\n \"\",\n '<%- content_item.get(\"description\") %>',\n \" \",\n \"\",\n \"folder\",\n \" \",\n \"\",\n '<%= _.escape(content_item.get(\"update_time\")) %>',\n \" \",\n \"\",\n '\\'\" class=\"primary-button btn-xs undelete_folder_btn\" type=\"button\" style=\"margin-left:1em;\">',\n ' \",\n \" \",\n \" \"\n ].join(\"\")\n );\n }\n });\n\n return {\n FolderRowView: FolderRowView\n };\n }\n);\n"]}
\ No newline at end of file
diff --git a/static/maps/mvc/library/library-foldertoolbar-view.js.map b/static/maps/mvc/library/library-foldertoolbar-view.js.map
index 0292e9879d8..9004e52406b 100644
--- a/static/maps/mvc/library/library-foldertoolbar-view.js.map
+++ b/static/maps/mvc/library/library-foldertoolbar-view.js.map
@@ -1 +1 @@
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[\n \"layout/masthead\",\n \"utils/utils\",\n \"libs/toastr\",\n \"mvc/library/library-model\",\n \"mvc/ui/ui-select\"\n ],\n function(\n mod_masthead,\n mod_utils,\n mod_toastr,\n mod_library_model,\n mod_select\n ) {\n var FolderToolbarView = Backbone.View.extend({\n el: \"#center\",\n\n events: {\n \"click #toolbtn_create_folder\": \"createFolderFromModal\",\n \"click #toolbtn_bulk_import\": \"modalBulkImport\",\n \"click #include_deleted_datasets_chk\": \"checkIncludeDeleted\",\n \"click #toolbtn_bulk_delete\": \"deleteSelectedItems\",\n \"click .toolbtn-show-locinfo\": \"showLocInfo\",\n \"click .page_size_prompt\": \"showPageSizePrompt\"\n },\n\n defaults: {\n can_add_library_item: false,\n contains_file_or_folder: false,\n chain_call_control: {\n total_number: 0,\n failed_number: 0\n },\n disabled_jstree_element: \"folders\"\n },\n\n modal: null,\n\n // directory browsing object\n jstree: null,\n\n // user's histories\n histories: null,\n\n // genome select\n select_genome: null,\n\n // extension select\n select_extension: null,\n\n // extension types\n list_extensions: [],\n\n // datatype placeholder for extension auto-detection\n auto: {\n id: \"auto\",\n text: \"Auto-detect\",\n description:\n \"This system will try to detect the file type automatically.\" +\n \" If your file is not detected properly as one of the known formats,\" +\n \" it most likely means that it has some format problems (e.g., different\" +\n \" number of columns on different rows). You can still coerce the system\" +\n \" to set your data to the format you think it should be.\" +\n \" You can also upload compressed files, which will automatically be decompressed.\"\n },\n\n // genomes\n list_genomes: [],\n\n initialize: function(options) {\n this.options = _.defaults(options || {}, this.defaults);\n this.fetchExtAndGenomes();\n this.render();\n },\n\n render: function(options) {\n this.options = _.extend(this.options, options);\n var toolbar_template = this.templateToolBar();\n var template_defaults = {\n id: this.options.id,\n is_admin: false,\n is_anonym: true,\n mutiple_add_dataset_options: false\n };\n if (Galaxy.user) {\n template_defaults.is_admin = Galaxy.user.isAdmin();\n template_defaults.is_anonym = Galaxy.user.isAnonymous();\n if (\n Galaxy.config.user_library_import_dir !== null ||\n Galaxy.config.allow_library_path_paste !== false ||\n Galaxy.config.library_import_dir !== null\n ) {\n template_defaults.mutiple_add_dataset_options = true;\n }\n }\n this.$el.html(toolbar_template(template_defaults));\n },\n\n /**\n * Called from FolderListView when needed.\n * @param {object} options common options\n */\n renderPaginator: function(options) {\n this.options = _.extend(this.options, options);\n var paginator_template = this.templatePaginator();\n $(\"body\")\n .find(\".folder-paginator\")\n .html(\n paginator_template({\n id: this.options.id,\n show_page: parseInt(this.options.show_page),\n page_count: parseInt(this.options.page_count),\n total_items_count: this.options.total_items_count,\n items_shown: this.options.items_shown\n })\n );\n },\n\n configureElements: function(options) {\n this.options = _.extend(this.options, options);\n\n if (this.options.can_add_library_item === true) {\n $(\".add-library-items\").show();\n } else {\n $(\".add-library-items\").hide();\n }\n if (this.options.contains_file_or_folder === true) {\n if (Galaxy.user) {\n if (!Galaxy.user.isAnonymous()) {\n $(\".logged-dataset-manipulation\").show();\n $(\".dataset-manipulation\").show();\n } else {\n $(\".dataset-manipulation\").show();\n $(\".logged-dataset-manipulation\").hide();\n }\n } else {\n $(\".logged-dataset-manipulation\").hide();\n $(\".dataset-manipulation\").hide();\n }\n } else {\n $(\".logged-dataset-manipulation\").hide();\n $(\".dataset-manipulation\").hide();\n }\n this.$el.find(\"[data-toggle]\").tooltip();\n },\n\n // shows modal for creating folder\n createFolderFromModal: function(event) {\n event.preventDefault();\n event.stopPropagation();\n\n // create modal\n var self = this;\n var template = this.templateNewFolderInModal();\n this.modal = Galaxy.modal;\n this.modal.show({\n closing_events: true,\n title: \"Create New Folder\",\n body: template(),\n buttons: {\n Create: function() {\n self.create_new_folder_event();\n },\n Close: function() {\n Galaxy.modal.hide();\n }\n }\n });\n },\n\n // create the new folder from modal\n create_new_folder_event: function() {\n var folderDetails = this.serialize_new_folder();\n if (this.validate_new_folder(folderDetails)) {\n var folder = new mod_library_model.FolderAsModel();\n var url_items = Backbone.history.fragment.split(\"/\"),\n current_folder_id;\n if (url_items.indexOf(\"page\") > -1) {\n current_folder_id = url_items[url_items.length - 3];\n } else {\n current_folder_id = url_items[url_items.length - 1];\n }\n folder.url = folder.urlRoot + current_folder_id;\n\n folder.save(folderDetails, {\n success: function(folder) {\n Galaxy.modal.hide();\n mod_toastr.success(\"Folder created.\");\n folder.set({ type: \"folder\" });\n Galaxy.libraries.folderListView.collection.add(\n folder\n );\n },\n error: function(model, response) {\n Galaxy.modal.hide();\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\"An error occurred.\");\n }\n }\n });\n } else {\n mod_toastr.error(\"Folder's name is missing.\");\n }\n return false;\n },\n\n // serialize data from the modal\n serialize_new_folder: function() {\n return {\n name: $(\"input[name='Name']\").val(),\n description: $(\"input[name='Description']\").val()\n };\n },\n\n // validate new folder info\n validate_new_folder: function(folderDetails) {\n return folderDetails.name !== \"\";\n },\n\n // show bulk import modal\n modalBulkImport: function() {\n var $checkedValues = this.findCheckedRows();\n if ($checkedValues.length === 0) {\n mod_toastr.info(\"You must select some datasets first.\");\n } else {\n var that = this;\n this.histories = new mod_library_model.GalaxyHistories();\n this.histories\n .fetch()\n .done(function() {\n var template = that.templateBulkImportInModal();\n that.modal = Galaxy.modal;\n that.modal.show({\n closing_events: true,\n title: \"Import into History\",\n body: template({\n histories: that.histories.models\n }),\n buttons: {\n Import: function() {\n that.importAllIntoHistory();\n },\n Close: function() {\n Galaxy.modal.hide();\n }\n }\n });\n })\n .fail(function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\"An error occurred.\");\n }\n });\n }\n },\n\n /**\n * Import all selected datasets into history.\n */\n importAllIntoHistory: function() {\n this.modal.disableButton(\"Import\");\n var new_history_name = this.modal\n .$(\"input[name=history_name]\")\n .val();\n var that = this;\n if (new_history_name !== \"\") {\n $.post(Galaxy.root + \"api/histories\", {\n name: new_history_name\n })\n .done(function(new_history) {\n that.options.last_used_history_id = new_history.id;\n that.processImportToHistory(\n new_history.id,\n new_history.name\n );\n })\n .fail(function(xhr, status, error) {\n mod_toastr.error(\"An error occurred.\");\n })\n .always(function() {\n that.modal.enableButton(\"Import\");\n });\n } else {\n var history_id = $(\n \"select[name=dataset_import_bulk] option:selected\"\n ).val();\n this.options.last_used_history_id = history_id;\n var history_name = $(\n \"select[name=dataset_import_bulk] option:selected\"\n ).text();\n this.processImportToHistory(history_id, history_name);\n this.modal.enableButton(\"Import\");\n }\n },\n\n processImportToHistory: function(history_id, history_name) {\n var dataset_ids = [];\n var folder_ids = [];\n this.findCheckedRows().each(function() {\n var row_id = $(this)\n .closest(\"tr\")\n .data(\"id\");\n if (row_id.substring(0, 1) == \"F\") {\n folder_ids.push(row_id);\n } else {\n dataset_ids.push(row_id);\n }\n });\n // prepare the dataset objects to be imported\n var datasets_to_import = [];\n for (var i = dataset_ids.length - 1; i >= 0; i--) {\n var library_dataset_id = dataset_ids[i];\n var historyItem = new mod_library_model.HistoryItem();\n historyItem.url =\n historyItem.urlRoot + history_id + \"/contents\";\n historyItem.content = library_dataset_id;\n historyItem.source = \"library\";\n datasets_to_import.push(historyItem);\n }\n\n // prepare the folder objects to be imported\n var folders_to_import = [];\n for (var i = folder_ids.length - 1; i >= 0; i--) {\n var library_folder_id = folder_ids[i];\n var historyItem = new mod_library_model.HistoryItem();\n historyItem.url =\n historyItem.urlRoot + history_id + \"/contents\";\n historyItem.content = library_folder_id;\n historyItem.source = \"library_folder\";\n datasets_to_import.push(historyItem);\n }\n\n this.initChainCallControl({\n length: datasets_to_import.length,\n action: \"to_history\",\n history_name: history_name\n });\n // set the used history as current so user will see the last one\n // that he imported into in the history panel on the 'analysis' page\n jQuery.getJSON(\n Galaxy.root + \"history/set_as_current?id=\" + history_id\n );\n this.chainCallImportingIntoHistory(\n datasets_to_import,\n history_name\n );\n },\n\n /**\n * Update the progress bar in modal window.\n */\n updateProgress: function() {\n this.progress += this.progressStep;\n $(\".progress-bar-import\").width(\n Math.round(this.progress) + \"%\"\n );\n var txt_representation =\n Math.round(this.progress) + \"% Complete\";\n $(\".completion_span\").text(txt_representation);\n },\n\n /**\n * download selected datasets\n * @param {str} folder_id id of the current folder\n * @param {str} format requested archive format\n */\n download: function(folder_id, format) {\n var dataset_ids = [];\n var folder_ids = [];\n this.findCheckedRows().each(function() {\n var row_id = $(this)\n .closest(\"tr\")\n .data(\"id\");\n if (row_id.substring(0, 1) == \"F\") {\n folder_ids.push(row_id);\n } else {\n dataset_ids.push(row_id);\n }\n });\n var url =\n Galaxy.root + \"api/libraries/datasets/download/\" + format;\n var data = { ld_ids: dataset_ids, folder_ids: folder_ids };\n this.processDownload(url, data, \"get\");\n },\n\n /**\n * Create hidden form and submit it through POST\n * to initialize the download.\n * @param {str} url url to call\n * @param {obj} data data to include in the request\n * @param {str} method method of the request\n */\n processDownload: function(url, data, method) {\n if (url && data) {\n // data can be string of parameters or array/object\n data = typeof data === \"string\" ? data : $.param(data);\n // split params into form inputs\n var inputs = \"\";\n $.each(data.split(\"&\"), function() {\n var pair = this.split(\"=\");\n inputs +=\n '',\n // toolbar start\n '
\",\n \"\",\n // toolbar end\n '
',\n \"
\",\n // paginator will append here\n '
',\n // container end\n \"
\",\n '
',\n \"\",\n 'library ',\n \" \",\n \"\",\n \"\",\n \"name \",\n '<%- library.get(\"name\") %> ',\n \" \",\n '<% if(library.get(\"description\") !== \"\") { %>',\n \"\",\n \"description \",\n '<%- library.get(\"description\") %> ',\n \" \",\n \"<% } %>\",\n '<% if(library.get(\"synopsis\") !== \"\") { %>',\n \"\",\n \"synopsis \",\n '<%- library.get(\"synopsis\") %> ',\n \" \",\n \"<% } %>\",\n '<% if(library.get(\"create_time_pretty\") !== \"\") { %>',\n \"\",\n \"created \",\n '\"><%- library.get(\"create_time_pretty\") %> \",\n \"<% } %>\",\n \"\",\n \"id \",\n '<%- library.get(\"id\") %> ',\n \" \",\n \" \",\n \"
\",\n '
',\n \"\",\n 'folder ',\n \" \",\n \"\",\n \"\",\n \"name \",\n \"<%- options.folder_name %> \",\n \" \",\n '<% if(options.folder_description !== \"\") { %>',\n \"\",\n \"description \",\n \"<%- options.folder_description %> \",\n \" \",\n \"<% } %>\",\n \"\",\n \"id \",\n \"<%- options.id %> \",\n \" \",\n \" \",\n \"
\",\n \"
',\n \"\",\n \"
\"\n ].join(\"\")\n );\n },\n\n templateBulkImportInModal: function() {\n return _.template(\n [\n \"\",\n '
',\n \"Select history: \",\n '',\n \"<% _.each(histories, function(history) { %>\",\n '\"><%= _.escape(history.get(\"name\")) %> ',\n \"<% }); %>\",\n \" \",\n \"
\",\n '
',\n \"or create new: \",\n '
\",\n \"
',\n \"Importing selected items to history <%= _.escape(history_name) %> \",\n \"
\",\n '',\n '
',\n '0% Complete ',\n \"
\",\n \"
',\n \"Adding selected datasets to library folder <%= _.escape(folder_name) %> \",\n \"
\",\n '',\n '
',\n '0% Complete ',\n \"
\",\n \"
',\n \"
\",\n '',\n '
',\n '0% Complete ',\n \"
\",\n \"
',\n '
All files you select will be imported into the current folder ignoring their folder structure.
',\n '
All files within the selected folders and their subfolders will be imported into the current folder.
',\n '
',\n '',\n ' \",\n '',\n ' \",\n \"
\",\n '
',\n '',\n ' \",\n '',\n ' \",\n '',\n ' \",\n '',\n ' \",\n \"
\",\n '
',\n \"Select all\",\n \" \",\n '
',\n \"Unselect all\",\n \" \",\n \"
\",\n // append jstree object here\n '
',\n \"
\",\n \"
\",\n \"
You can set extension type and genome for all imported datasets at once:
\",\n \"
\",\n 'Type:
\",\n \"
\",\n \"
\",\n '',\n \"Tag datasets based on file names.\",\n ' \",\n \"
\",\n \"
',\n '
All files within the given folders and their subfolders will be imported into the current folder.
',\n '
',\n '',\n ' \",\n '',\n ' \",\n \"',\n ' \",\n '',\n ' \",\n \"
\",\n '
',\n \"
\",\n \"
You can set extension type and genome for all imported datasets at once:
\",\n \"
\",\n 'Type:
\",\n \"
\",\n '',\n \"Tag datasets based on file names.\",\n ' \",\n \"
\",\n \"
',\n \"
\",\n \"1. Select history: \",\n ' ',\n \"<% _.each(histories, function(history) { %>\", //history select box\n '\"><%= _.escape(history.get(\"name\")) %> ',\n \"<% }); %>\",\n \" \",\n \"
\",\n \"
\",\n '
',\n \"
\",\n \"
2. Choose the datasets to import:
\",\n \"\",\n '',\n \"Select all\",\n \" \",\n '',\n \"Unselect all\",\n \" \",\n \"
\",\n \"\",\n \"<% _.each(history_contents, function(history_item) { %>\",\n '<% if (history_item.get(\"deleted\") != true ) { %>',\n '<% var item_name = history_item.get(\"name\") %>',\n '<% if (history_item.get(\"type\") === \"collection\") { %>',\n '<% var collection_type = history_item.get(\"collection_type\") %>',\n '<% if (collection_type === \"list\") { %>',\n '\" data-name=\"<%= _.escape(history_item.get(\"type\")) %>\">',\n \"\",\n '\">',\n ' \",\n \" \",\n \"<% } else { %>\",\n '',\n '<%= _.escape(history_item.get(\"hid\")) %>: ',\n '<%= item_name.length > 75 ? _.escape(\"...\".concat(item_name.substr(-75))) : _.escape(item_name) %> (Dataset Collection of type <%= _.escape(collection_type) %> not supported.)',\n \" \",\n \"\" data-name=\"<%= _.escape(history_item.get(\"type\")) %>\">',\n '\">',\n ' \",\n \" \",\n \"<% } %>\",\n \"<% } %>\",\n \"<% }); %>\",\n \" \"\n ].join(\"\")\n );\n },\n\n templatePaginator: function() {\n return _.template(\n [\n '\",\n \"\",\n \" showing \",\n '',\n \"<%- items_shown %>\",\n \" \",\n \" of <%- total_items_count %> items\",\n \" \"\n ].join(\"\")\n );\n }\n });\n\n return {\n FolderToolbarView: FolderToolbarView\n };\n }\n);\n"]}
\ No newline at end of file
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[\n \"layout/masthead\",\n \"utils/utils\",\n \"libs/toastr\",\n \"mvc/library/library-model\",\n \"mvc/ui/ui-select\"\n ],\n function(\n mod_masthead,\n mod_utils,\n mod_toastr,\n mod_library_model,\n mod_select\n ) {\n var FolderToolbarView = Backbone.View.extend({\n el: \"#center\",\n\n events: {\n \"click #toolbtn_create_folder\": \"createFolderFromModal\",\n \"click #toolbtn_bulk_import\": \"modalBulkImport\",\n \"click #include_deleted_datasets_chk\": \"checkIncludeDeleted\",\n \"click #toolbtn_bulk_delete\": \"deleteSelectedItems\",\n \"click .toolbtn-show-locinfo\": \"showLocInfo\",\n \"click .page_size_prompt\": \"showPageSizePrompt\"\n },\n\n defaults: {\n can_add_library_item: false,\n contains_file_or_folder: false,\n chain_call_control: {\n total_number: 0,\n failed_number: 0\n },\n disabled_jstree_element: \"folders\"\n },\n\n modal: null,\n\n // directory browsing object\n jstree: null,\n\n // user's histories\n histories: null,\n\n // genome select\n select_genome: null,\n\n // extension select\n select_extension: null,\n\n // extension types\n list_extensions: [],\n\n // datatype placeholder for extension auto-detection\n auto: {\n id: \"auto\",\n text: \"Auto-detect\",\n description:\n \"This system will try to detect the file type automatically.\" +\n \" If your file is not detected properly as one of the known formats,\" +\n \" it most likely means that it has some format problems (e.g., different\" +\n \" number of columns on different rows). You can still coerce the system\" +\n \" to set your data to the format you think it should be.\" +\n \" You can also upload compressed files, which will automatically be decompressed.\"\n },\n\n // genomes\n list_genomes: [],\n\n initialize: function(options) {\n this.options = _.defaults(options || {}, this.defaults);\n this.fetchExtAndGenomes();\n this.render();\n },\n\n render: function(options) {\n this.options = _.extend(this.options, options);\n var toolbar_template = this.templateToolBar();\n var template_defaults = {\n id: this.options.id,\n is_admin: false,\n is_anonym: true,\n mutiple_add_dataset_options: false\n };\n if (Galaxy.user) {\n template_defaults.is_admin = Galaxy.user.isAdmin();\n template_defaults.is_anonym = Galaxy.user.isAnonymous();\n if (\n Galaxy.config.user_library_import_dir !== null ||\n Galaxy.config.allow_library_path_paste !== false ||\n Galaxy.config.library_import_dir !== null\n ) {\n template_defaults.mutiple_add_dataset_options = true;\n }\n }\n this.$el.html(toolbar_template(template_defaults));\n },\n\n /**\n * Called from FolderListView when needed.\n * @param {object} options common options\n */\n renderPaginator: function(options) {\n this.options = _.extend(this.options, options);\n var paginator_template = this.templatePaginator();\n $(\"body\")\n .find(\".folder-paginator\")\n .html(\n paginator_template({\n id: this.options.id,\n show_page: parseInt(this.options.show_page),\n page_count: parseInt(this.options.page_count),\n total_items_count: this.options.total_items_count,\n items_shown: this.options.items_shown,\n folder_page_size: Galaxy.libraries.preferences.get(\n \"folder_page_size\"\n )\n })\n );\n },\n\n configureElements: function(options) {\n this.options = _.extend(this.options, options);\n\n if (this.options.can_add_library_item === true) {\n $(\".add-library-items\").show();\n } else {\n $(\".add-library-items\").hide();\n }\n if (this.options.contains_file_or_folder === true) {\n if (Galaxy.user) {\n if (!Galaxy.user.isAnonymous()) {\n $(\".logged-dataset-manipulation\").show();\n $(\".dataset-manipulation\").show();\n } else {\n $(\".dataset-manipulation\").show();\n $(\".logged-dataset-manipulation\").hide();\n }\n } else {\n $(\".logged-dataset-manipulation\").hide();\n $(\".dataset-manipulation\").hide();\n }\n } else {\n $(\".logged-dataset-manipulation\").hide();\n $(\".dataset-manipulation\").hide();\n }\n this.$el.find(\"[data-toggle]\").tooltip();\n },\n\n // shows modal for creating folder\n createFolderFromModal: function(event) {\n event.preventDefault();\n event.stopPropagation();\n\n // create modal\n var self = this;\n var template = this.templateNewFolderInModal();\n this.modal = Galaxy.modal;\n this.modal.show({\n closing_events: true,\n title: \"Create New Folder\",\n body: template(),\n buttons: {\n Create: function() {\n self.create_new_folder_event();\n },\n Close: function() {\n Galaxy.modal.hide();\n }\n }\n });\n },\n\n // create the new folder from modal\n create_new_folder_event: function() {\n var folderDetails = this.serialize_new_folder();\n if (this.validate_new_folder(folderDetails)) {\n var folder = new mod_library_model.FolderAsModel();\n var url_items = Backbone.history.fragment.split(\"/\"),\n current_folder_id;\n if (url_items.indexOf(\"page\") > -1) {\n current_folder_id = url_items[url_items.length - 3];\n } else {\n current_folder_id = url_items[url_items.length - 1];\n }\n folder.url = folder.urlRoot + current_folder_id;\n\n folder.save(folderDetails, {\n success: function(folder) {\n Galaxy.modal.hide();\n mod_toastr.success(\"Folder created.\");\n folder.set({ type: \"folder\" });\n Galaxy.libraries.folderListView.collection.add(\n folder\n );\n },\n error: function(model, response) {\n Galaxy.modal.hide();\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\"An error occurred.\");\n }\n }\n });\n } else {\n mod_toastr.error(\"Folder's name is missing.\");\n }\n return false;\n },\n\n // serialize data from the modal\n serialize_new_folder: function() {\n return {\n name: $(\"input[name='Name']\").val(),\n description: $(\"input[name='Description']\").val()\n };\n },\n\n // validate new folder info\n validate_new_folder: function(folderDetails) {\n return folderDetails.name !== \"\";\n },\n\n // show bulk import modal\n modalBulkImport: function() {\n var $checkedValues = this.findCheckedRows();\n if ($checkedValues.length === 0) {\n mod_toastr.info(\"You must select some datasets first.\");\n } else {\n var that = this;\n this.histories = new mod_library_model.GalaxyHistories();\n this.histories\n .fetch()\n .done(function() {\n var template = that.templateBulkImportInModal();\n that.modal = Galaxy.modal;\n that.modal.show({\n closing_events: true,\n title: \"Import into History\",\n body: template({\n histories: that.histories.models\n }),\n buttons: {\n Import: function() {\n that.importAllIntoHistory();\n },\n Close: function() {\n Galaxy.modal.hide();\n }\n }\n });\n })\n .fail(function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\"An error occurred.\");\n }\n });\n }\n },\n\n /**\n * Import all selected datasets into history.\n */\n importAllIntoHistory: function() {\n this.modal.disableButton(\"Import\");\n var new_history_name = this.modal\n .$(\"input[name=history_name]\")\n .val();\n var that = this;\n if (new_history_name !== \"\") {\n $.post(Galaxy.root + \"api/histories\", {\n name: new_history_name\n })\n .done(function(new_history) {\n that.options.last_used_history_id = new_history.id;\n that.processImportToHistory(\n new_history.id,\n new_history.name\n );\n })\n .fail(function(xhr, status, error) {\n mod_toastr.error(\"An error occurred.\");\n })\n .always(function() {\n that.modal.enableButton(\"Import\");\n });\n } else {\n var history_id = $(\n \"select[name=dataset_import_bulk] option:selected\"\n ).val();\n this.options.last_used_history_id = history_id;\n var history_name = $(\n \"select[name=dataset_import_bulk] option:selected\"\n ).text();\n this.processImportToHistory(history_id, history_name);\n this.modal.enableButton(\"Import\");\n }\n },\n\n processImportToHistory: function(history_id, history_name) {\n var dataset_ids = [];\n var folder_ids = [];\n this.findCheckedRows().each(function() {\n var row_id = $(this)\n .closest(\"tr\")\n .data(\"id\");\n if (row_id.substring(0, 1) == \"F\") {\n folder_ids.push(row_id);\n } else {\n dataset_ids.push(row_id);\n }\n });\n // prepare the dataset objects to be imported\n var datasets_to_import = [];\n for (var i = dataset_ids.length - 1; i >= 0; i--) {\n var library_dataset_id = dataset_ids[i];\n var historyItem = new mod_library_model.HistoryItem();\n historyItem.url =\n historyItem.urlRoot + history_id + \"/contents\";\n historyItem.content = library_dataset_id;\n historyItem.source = \"library\";\n datasets_to_import.push(historyItem);\n }\n\n // prepare the folder objects to be imported\n var folders_to_import = [];\n for (var i = folder_ids.length - 1; i >= 0; i--) {\n var library_folder_id = folder_ids[i];\n var historyItem = new mod_library_model.HistoryItem();\n historyItem.url =\n historyItem.urlRoot + history_id + \"/contents\";\n historyItem.content = library_folder_id;\n historyItem.source = \"library_folder\";\n datasets_to_import.push(historyItem);\n }\n\n this.initChainCallControl({\n length: datasets_to_import.length,\n action: \"to_history\",\n history_name: history_name\n });\n // set the used history as current so user will see the last one\n // that he imported into in the history panel on the 'analysis' page\n jQuery.getJSON(\n Galaxy.root + \"history/set_as_current?id=\" + history_id\n );\n this.chainCallImportingIntoHistory(\n datasets_to_import,\n history_name\n );\n },\n\n /**\n * Update the progress bar in modal window.\n */\n updateProgress: function() {\n this.progress += this.progressStep;\n $(\".progress-bar-import\").width(\n Math.round(this.progress) + \"%\"\n );\n var txt_representation =\n Math.round(this.progress) + \"% Complete\";\n $(\".completion_span\").text(txt_representation);\n },\n\n /**\n * download selected datasets\n * @param {str} folder_id id of the current folder\n * @param {str} format requested archive format\n */\n download: function(folder_id, format) {\n var dataset_ids = [];\n var folder_ids = [];\n this.findCheckedRows().each(function() {\n var row_id = $(this)\n .closest(\"tr\")\n .data(\"id\");\n if (row_id.substring(0, 1) == \"F\") {\n folder_ids.push(row_id);\n } else {\n dataset_ids.push(row_id);\n }\n });\n var url =\n Galaxy.root + \"api/libraries/datasets/download/\" + format;\n var data = { ld_ids: dataset_ids, folder_ids: folder_ids };\n this.processDownload(url, data, \"get\");\n },\n\n /**\n * Create hidden form and submit it through POST\n * to initialize the download.\n * @param {str} url url to call\n * @param {obj} data data to include in the request\n * @param {str} method method of the request\n */\n processDownload: function(url, data, method) {\n if (url && data) {\n // data can be string of parameters or array/object\n data = typeof data === \"string\" ? data : $.param(data);\n // split params into form inputs\n var inputs = \"\";\n $.each(data.split(\"&\"), function() {\n var pair = this.split(\"=\");\n inputs +=\n '',\n // toolbar start\n '
\",\n \"\",\n // toolbar end\n '
',\n \"
\",\n // paginator will append here\n '
',\n // container end\n \"
\",\n '
',\n \"\",\n 'library ',\n \" \",\n \"\",\n \"\",\n \"name \",\n '<%- library.get(\"name\") %> ',\n \" \",\n '<% if(library.get(\"description\") !== \"\") { %>',\n \"\",\n \"description \",\n '<%- library.get(\"description\") %> ',\n \" \",\n \"<% } %>\",\n '<% if(library.get(\"synopsis\") !== \"\") { %>',\n \"\",\n \"synopsis \",\n '<%- library.get(\"synopsis\") %> ',\n \" \",\n \"<% } %>\",\n '<% if(library.get(\"create_time_pretty\") !== \"\") { %>',\n \"\",\n \"created \",\n '\"><%- library.get(\"create_time_pretty\") %> \",\n \"<% } %>\",\n \"\",\n \"id \",\n '<%- library.get(\"id\") %> ',\n \" \",\n \" \",\n \"
\",\n '
',\n \"\",\n 'folder ',\n \" \",\n \"\",\n \"\",\n \"name \",\n \"<%- options.folder_name %> \",\n \" \",\n '<% if(options.folder_description !== \"\") { %>',\n \"\",\n \"description \",\n \"<%- options.folder_description %> \",\n \" \",\n \"<% } %>\",\n \"\",\n \"id \",\n \"<%- options.id %> \",\n \" \",\n \" \",\n \"
\",\n \"
',\n \"\",\n \"
\"\n ].join(\"\")\n );\n },\n\n templateBulkImportInModal: function() {\n return _.template(\n [\n \"\",\n '
',\n \"Select history: \",\n '',\n \"<% _.each(histories, function(history) { %>\",\n '\"><%= _.escape(history.get(\"name\")) %> ',\n \"<% }); %>\",\n \" \",\n \"
\",\n '
',\n \"or create new: \",\n '
\",\n \"
',\n \"Importing selected items to history <%= _.escape(history_name) %> \",\n \"
\",\n '',\n '
',\n '0% Complete ',\n \"
\",\n \"
',\n \"Adding selected datasets to library folder <%= _.escape(folder_name) %> \",\n \"
\",\n '',\n '
',\n '0% Complete ',\n \"
\",\n \"
',\n \"
\",\n '',\n '
',\n '0% Complete ',\n \"
\",\n \"
',\n '
All files you select will be imported into the current folder ignoring their folder structure.
',\n '
All files within the selected folders and their subfolders will be imported into the current folder.
',\n '
',\n '',\n ' \",\n '',\n ' \",\n \"
\",\n '
',\n '',\n ' \",\n '',\n ' \",\n '',\n ' \",\n '',\n ' \",\n \"
\",\n '
',\n \"Select all\",\n \" \",\n '
',\n \"Unselect all\",\n \" \",\n \"
\",\n // append jstree object here\n '
',\n \"
\",\n \"
\",\n \"
You can set extension type and genome for all imported datasets at once:
\",\n \"
\",\n 'Type:
\",\n \"
\",\n \"
\",\n '',\n \"Tag datasets based on file names.\",\n ' \",\n \"
\",\n \"
',\n '
All files within the given folders and their subfolders will be imported into the current folder.
',\n '
',\n '',\n ' \",\n '',\n ' \",\n \"',\n ' \",\n '',\n ' \",\n \"
\",\n '
',\n \"
\",\n \"
You can set extension type and genome for all imported datasets at once:
\",\n \"
\",\n 'Type:
\",\n \"
\",\n '',\n \"Tag datasets based on file names.\",\n ' \",\n \"
\",\n \"
',\n \"
\",\n \"1. Select history: \",\n ' ',\n \"<% _.each(histories, function(history) { %>\", //history select box\n '\"><%= _.escape(history.get(\"name\")) %> ',\n \"<% }); %>\",\n \" \",\n \"
\",\n \"
\",\n '
',\n \"
\",\n \"
2. Choose the datasets to import:
\",\n \"\",\n '',\n \"Select all\",\n \" \",\n '',\n \"Unselect all\",\n \" \",\n \"
\",\n \"\",\n \"<% _.each(history_contents, function(history_item) { %>\",\n '<% if (history_item.get(\"deleted\") != true ) { %>',\n '<% var item_name = history_item.get(\"name\") %>',\n '<% if (history_item.get(\"type\") === \"collection\") { %>',\n '<% var collection_type = history_item.get(\"collection_type\") %>',\n '<% if (collection_type === \"list\") { %>',\n '\" data-name=\"<%= _.escape(history_item.get(\"type\")) %>\">',\n \"\",\n '\">',\n ' \",\n \" \",\n \"<% } else { %>\",\n '',\n '<%= _.escape(history_item.get(\"hid\")) %>: ',\n '<%= item_name.length > 75 ? _.escape(\"...\".concat(item_name.substr(-75))) : _.escape(item_name) %> (Dataset Collection of type <%= _.escape(collection_type) %> not supported.)',\n \" \",\n \"\" data-name=\"<%= _.escape(history_item.get(\"type\")) %>\">',\n '\">',\n ' \",\n \" \",\n \"<% } %>\",\n \"<% } %>\",\n \"<% }); %>\",\n \" \"\n ].join(\"\")\n );\n },\n\n templatePaginator: function() {\n return _.template(\n [\n '\",\n \"\",\n ' <%- items_shown %> items shown per page\" class=\"page_size_prompt\">(change) ',\n \" \",\n \"\",\n \" <%- total_items_count %> total\",\n \" \"\n ].join(\"\")\n );\n }\n });\n\n return {\n FolderToolbarView: FolderToolbarView\n };\n }\n);\n"]}
\ No newline at end of file
diff --git a/static/maps/mvc/library/library-libraryrow-view.js.map b/static/maps/mvc/library/library-libraryrow-view.js.map
index 057e133e578..16b56b95c6c 100644
--- a/static/maps/mvc/library/library-libraryrow-view.js.map
+++ b/static/maps/mvc/library/library-libraryrow-view.js.map
@@ -1 +1 @@
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dependencies\ndefine([\"layout/masthead\", \"utils/utils\", \"libs/toastr\"], function(\n mod_masthead,\n mod_utils,\n mod_toastr\n) {\n // galaxy library row view\n var LibraryRowView = Backbone.View.extend({\n events: {\n \"click .edit_library_btn\": \"edit_button_clicked\",\n \"click .cancel_library_btn\": \"cancel_library_modification\",\n \"click .save_library_btn\": \"save_library_modification\",\n \"click .delete_library_btn\": \"delete_library\",\n \"click .undelete_library_btn\": \"undelete_library\"\n },\n\n edit_mode: false,\n\n element_visibility_config: {\n upload_library_btn: false,\n edit_library_btn: false,\n permission_library_btn: false,\n save_library_btn: false,\n cancel_library_btn: false,\n delete_library_btn: false,\n undelete_library_btn: false\n },\n\n initialize: function(library) {\n this.render(library);\n },\n\n render: function(library) {\n if (typeof library === \"undefined\") {\n library = Galaxy.libraries.libraryListView.collection.get(\n this.$el.data(\"id\")\n );\n }\n this.prepareButtons(library);\n var tmpl = this.templateRow();\n this.setElement(\n tmpl({\n library: library,\n button_config: this.element_visibility_config,\n edit_mode: this.edit_mode\n })\n );\n this.$el.show();\n return this;\n },\n\n repaint: function(library) {\n /* need to hide manually because of the element removal in setElement\n invoked in render() */\n $(\".tooltip\").hide();\n /* we need to store the old element to be able to replace it with\n new one */\n var old_element = this.$el;\n /* if user canceled the library param is undefined,\n if user saved and succeeded the updated library is rendered */\n this.render();\n old_element.replaceWith(this.$el);\n /* now we attach new tooltips to the newly created row element */\n this.$el.find(\"[data-toggle]\").tooltip();\n },\n\n /**\n * Function modifies the visibility of buttons for\n * the filling of the row template of given library.\n */\n prepareButtons: function(library) {\n var vis_config = this.element_visibility_config;\n\n if (this.edit_mode === false) {\n vis_config.save_library_btn = false;\n vis_config.cancel_library_btn = false;\n vis_config.delete_library_btn = false;\n if (library.get(\"deleted\") === true) {\n vis_config.undelete_library_btn = true;\n vis_config.upload_library_btn = false;\n vis_config.edit_library_btn = false;\n vis_config.permission_library_btn = false;\n } else if (library.get(\"deleted\") === false) {\n vis_config.save_library_btn = false;\n vis_config.cancel_library_btn = false;\n vis_config.undelete_library_btn = false;\n if (library.get(\"can_user_add\") === true) {\n vis_config.upload_library_btn = true;\n }\n if (library.get(\"can_user_modify\") === true) {\n vis_config.edit_library_btn = true;\n }\n if (library.get(\"can_user_manage\") === true) {\n vis_config.permission_library_btn = true;\n }\n }\n } else if (this.edit_mode === true) {\n vis_config.upload_library_btn = false;\n vis_config.edit_library_btn = false;\n vis_config.permission_library_btn = false;\n vis_config.save_library_btn = true;\n vis_config.cancel_library_btn = true;\n vis_config.delete_library_btn = true;\n vis_config.undelete_library_btn = false;\n }\n\n this.element_visibility_config = vis_config;\n },\n\n /* User clicked the 'edit' button on row so we render a new row\n that allows editing */\n edit_button_clicked: function() {\n this.edit_mode = true;\n this.repaint();\n },\n\n /* User clicked the 'cancel' button so we render normal rowView */\n cancel_library_modification: function() {\n // mod_toastr.info('Modifications canceled');\n this.edit_mode = false;\n this.repaint();\n },\n\n save_library_modification: function() {\n var library = Galaxy.libraries.libraryListView.collection.get(\n this.$el.data(\"id\")\n );\n var is_changed = false;\n\n var new_name = this.$el.find(\".input_library_name\").val();\n if (\n typeof new_name !== \"undefined\" &&\n new_name !== library.get(\"name\")\n ) {\n if (new_name.length > 2) {\n library.set(\"name\", new_name);\n is_changed = true;\n } else {\n mod_toastr.warning(\n \"Library name has to be at least 3 characters long.\"\n );\n return;\n }\n }\n\n var new_description = this.$el\n .find(\".input_library_description\")\n .val();\n if (\n typeof new_description !== \"undefined\" &&\n new_description !== library.get(\"description\")\n ) {\n library.set(\"description\", new_description);\n is_changed = true;\n }\n\n var new_synopsis = this.$el.find(\".input_library_synopsis\").val();\n if (\n typeof new_synopsis !== \"undefined\" &&\n new_synopsis !== library.get(\"synopsis\")\n ) {\n library.set(\"synopsis\", new_synopsis);\n is_changed = true;\n }\n\n if (is_changed) {\n var row_view = this;\n library.save(null, {\n patch: true,\n success: function(library) {\n row_view.edit_mode = false;\n row_view.repaint(library);\n mod_toastr.success(\"Changes to library saved.\");\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\n \"An error occured while attempting to update the library.\"\n );\n }\n }\n });\n } else {\n this.edit_mode = false;\n this.repaint(library);\n mod_toastr.info(\"Nothing has changed.\");\n }\n },\n\n delete_library: function() {\n var library = Galaxy.libraries.libraryListView.collection.get(\n this.$el.data(\"id\")\n );\n var row_view = this;\n // mark the library deleted\n library.destroy({\n success: function(library) {\n library.set(\"deleted\", true);\n // add the new deleted library back to the collection (Galaxy specialty)\n Galaxy.libraries.libraryListView.collection.add(library);\n row_view.edit_mode = false;\n if (\n Galaxy.libraries.preferences.get(\"with_deleted\") ===\n false\n ) {\n $(\".tooltip\").hide();\n row_view.repaint(library);\n row_view.$el.remove();\n } else if (\n Galaxy.libraries.preferences.get(\"with_deleted\") ===\n true\n ) {\n row_view.repaint(library);\n }\n mod_toastr.success(\"Library has been marked deleted.\");\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\n \"An error occured during deleting the library.\"\n );\n }\n }\n });\n },\n\n undelete_library: function() {\n var library = Galaxy.libraries.libraryListView.collection.get(\n this.$el.data(\"id\")\n );\n var row_view = this;\n\n // mark the library undeleted\n library.url = library.urlRoot + library.id + \"?undelete=true\";\n library.destroy({\n success: function(library) {\n // add the newly undeleted library back to the collection\n // backbone does not accept changes through destroy, so update it too\n library.set(\"deleted\", false);\n Galaxy.libraries.libraryListView.collection.add(library);\n row_view.edit_mode = false;\n row_view.repaint(library);\n mod_toastr.success(\"Library has been undeleted.\");\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\n \"An error occured while undeleting the library.\"\n );\n }\n }\n });\n },\n\n templateRow: function() {\n return _.template(\n [\n '\" style=\"display:none;\" data-id=\"<%- library.get(\"id\") %>\">',\n \"<% if(!edit_mode) { %>\",\n '<% if(library.get(\"deleted\")) { %>',\n ' <%- library.get(\"name\") %>\"><%- library.get(\"name\") %> \"><%= _.escape(library.get(\"description\")).substring(0, 80) + \"...\" %> ',\n \"<% } else { %>\",\n '<%= _.escape(library.get(\"description\"))%> ',\n \"<% } %>\",\n \"<% } else { %>\",\n \"\"><%= _.escape(library.get(\"synopsis\")).substring(0, 120) + \"...\" %> ',\n \"<% } else { %>\",\n '<%= _.escape(library.get(\"synopsis\"))%> ',\n \"<% } %>\",\n \"<% } else { %>\",\n \"',\n '<% if( (library.get(\"public\")) && (library.get(\"deleted\") === false) ) { %>',\n ' ',\n \"<% }%>\",\n '\\'\" class=\"primary-button btn-xs edit_library_btn\" type=\"button\" style=\"<% if(button_config.edit_library_btn === false) { print(\"display:none;\") } %>\"> ',\n '/permissions\">\\'\" class=\"primary-button btn-xs permission_library_btn\" type=\"button\" style=\"<% if(button_config.permission_library_btn === false) { print(\"display:none;\") } %>\"> ',\n '\"> Save ',\n '\"> Cancel ',\n '\" class=\"primary-button btn-xs delete_library_btn\" type=\"button\" style=\"<% if(button_config.delete_library_btn === false) { print(\"display:none;\") } %>\"> Delete ',\n ' \" class=\"primary-button btn-xs undelete_library_btn\" type=\"button\" style=\"<% if(button_config.undelete_library_btn === false) { print(\"display:none;\") } %>\"> Undelete ',\n \" \",\n \" \"\n ].join(\"\")\n );\n }\n });\n\n return {\n LibraryRowView: LibraryRowView\n };\n});\n"]}
\ No newline at end of file
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dependencies\ndefine([\"layout/masthead\", \"utils/utils\", \"libs/toastr\"], function(\n mod_masthead,\n mod_utils,\n mod_toastr\n) {\n // galaxy library row view\n var LibraryRowView = Backbone.View.extend({\n events: {\n \"click .edit_library_btn\": \"edit_button_clicked\",\n \"click .cancel_library_btn\": \"cancel_library_modification\",\n \"click .save_library_btn\": \"save_library_modification\",\n \"click .delete_library_btn\": \"delete_library\",\n \"click .undelete_library_btn\": \"undelete_library\"\n },\n\n edit_mode: false,\n\n element_visibility_config: {\n upload_library_btn: false,\n edit_library_btn: false,\n permission_library_btn: false,\n save_library_btn: false,\n cancel_library_btn: false,\n delete_library_btn: false,\n undelete_library_btn: false\n },\n\n initialize: function(library) {\n this.render(library);\n },\n\n render: function(library) {\n if (typeof library === \"undefined\") {\n library = Galaxy.libraries.libraryListView.collection.get(\n this.$el.data(\"id\")\n );\n }\n this.prepareButtons(library);\n var tmpl = this.templateRow();\n this.setElement(\n tmpl({\n library: library,\n button_config: this.element_visibility_config,\n edit_mode: this.edit_mode\n })\n );\n this.$el.show();\n return this;\n },\n\n repaint: function(library) {\n /* need to hide manually because of the element removal in setElement\n invoked in render() */\n $(\".tooltip\").hide();\n /* we need to store the old element to be able to replace it with\n new one */\n var old_element = this.$el;\n /* if user canceled the library param is undefined,\n if user saved and succeeded the updated library is rendered */\n this.render();\n old_element.replaceWith(this.$el);\n /* now we attach new tooltips to the newly created row element */\n this.$el.find(\"[data-toggle]\").tooltip();\n },\n\n /**\n * Function modifies the visibility of buttons for\n * the filling of the row template of given library.\n */\n prepareButtons: function(library) {\n var vis_config = this.element_visibility_config;\n\n if (this.edit_mode === false) {\n vis_config.save_library_btn = false;\n vis_config.cancel_library_btn = false;\n vis_config.delete_library_btn = false;\n if (library.get(\"deleted\") === true) {\n vis_config.undelete_library_btn = true;\n vis_config.upload_library_btn = false;\n vis_config.edit_library_btn = false;\n vis_config.permission_library_btn = false;\n } else if (library.get(\"deleted\") === false) {\n vis_config.save_library_btn = false;\n vis_config.cancel_library_btn = false;\n vis_config.undelete_library_btn = false;\n if (library.get(\"can_user_add\") === true) {\n vis_config.upload_library_btn = true;\n }\n if (library.get(\"can_user_modify\") === true) {\n vis_config.edit_library_btn = true;\n }\n if (library.get(\"can_user_manage\") === true) {\n vis_config.permission_library_btn = true;\n }\n }\n } else if (this.edit_mode === true) {\n vis_config.upload_library_btn = false;\n vis_config.edit_library_btn = false;\n vis_config.permission_library_btn = false;\n vis_config.save_library_btn = true;\n vis_config.cancel_library_btn = true;\n vis_config.delete_library_btn = true;\n vis_config.undelete_library_btn = false;\n }\n\n this.element_visibility_config = vis_config;\n },\n\n /* User clicked the 'edit' button on row so we render a new row\n that allows editing */\n edit_button_clicked: function() {\n this.edit_mode = true;\n this.repaint();\n },\n\n /* User clicked the 'cancel' button so we render normal rowView */\n cancel_library_modification: function() {\n // mod_toastr.info('Modifications canceled');\n this.edit_mode = false;\n this.repaint();\n },\n\n save_library_modification: function() {\n var library = Galaxy.libraries.libraryListView.collection.get(\n this.$el.data(\"id\")\n );\n var is_changed = false;\n\n var new_name = this.$el.find(\".input_library_name\").val();\n if (\n typeof new_name !== \"undefined\" &&\n new_name !== library.get(\"name\")\n ) {\n if (new_name.length > 2) {\n library.set(\"name\", new_name);\n is_changed = true;\n } else {\n mod_toastr.warning(\n \"Library name has to be at least 3 characters long.\"\n );\n return;\n }\n }\n\n var new_description = this.$el\n .find(\".input_library_description\")\n .val();\n if (\n typeof new_description !== \"undefined\" &&\n new_description !== library.get(\"description\")\n ) {\n library.set(\"description\", new_description);\n is_changed = true;\n }\n\n var new_synopsis = this.$el.find(\".input_library_synopsis\").val();\n if (\n typeof new_synopsis !== \"undefined\" &&\n new_synopsis !== library.get(\"synopsis\")\n ) {\n library.set(\"synopsis\", new_synopsis);\n is_changed = true;\n }\n\n if (is_changed) {\n var row_view = this;\n library.save(null, {\n patch: true,\n success: function(library) {\n row_view.edit_mode = false;\n row_view.repaint(library);\n mod_toastr.success(\"Changes to library saved.\");\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\n \"An error occured while attempting to update the library.\"\n );\n }\n }\n });\n } else {\n this.edit_mode = false;\n this.repaint(library);\n mod_toastr.info(\"Nothing has changed.\");\n }\n },\n\n delete_library: function() {\n var library = Galaxy.libraries.libraryListView.collection.get(\n this.$el.data(\"id\")\n );\n var row_view = this;\n // mark the library deleted\n library.destroy({\n success: function(library) {\n library.set(\"deleted\", true);\n // add the new deleted library back to the collection (Galaxy specialty)\n Galaxy.libraries.libraryListView.collection.add(library);\n row_view.edit_mode = false;\n if (\n Galaxy.libraries.preferences.get(\"with_deleted\") ===\n false\n ) {\n $(\".tooltip\").hide();\n row_view.repaint(library);\n row_view.$el.remove();\n } else if (\n Galaxy.libraries.preferences.get(\"with_deleted\") ===\n true\n ) {\n row_view.repaint(library);\n }\n mod_toastr.success(\"Library has been marked deleted.\");\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\n \"An error occured during deleting the library.\"\n );\n }\n }\n });\n },\n\n undelete_library: function() {\n var library = Galaxy.libraries.libraryListView.collection.get(\n this.$el.data(\"id\")\n );\n var row_view = this;\n\n // mark the library undeleted\n library.url = library.urlRoot + library.id + \"?undelete=true\";\n library.destroy({\n success: function(library) {\n // add the newly undeleted library back to the collection\n // backbone does not accept changes through destroy, so update it too\n library.set(\"deleted\", false);\n Galaxy.libraries.libraryListView.collection.add(library);\n row_view.edit_mode = false;\n row_view.repaint(library);\n mod_toastr.success(\"Library has been undeleted.\");\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\n \"An error occured while undeleting the library.\"\n );\n }\n }\n });\n },\n\n templateRow: function() {\n return _.template(\n [\n '\" style=\"display:none;\" data-id=\"<%- library.get(\"id\") %>\">',\n \"<% if(!edit_mode) { %>\",\n '<% if(library.get(\"deleted\")) { %>',\n '<%- library.get(\"name\") %> ',\n \"<% } else { %>\",\n '\"><%- library.get(\"name\") %> \"><%= _.escape(library.get(\"description\")).substring(0, 80) + \"...\" %> ',\n \"<% } else { %>\",\n '<%= _.escape(library.get(\"description\"))%> ',\n \"<% } %>\",\n \"<% } else { %>\",\n \"\"><%= _.escape(library.get(\"synopsis\")).substring(0, 120) + \"...\" %> ',\n \"<% } else { %>\",\n '<%= _.escape(library.get(\"synopsis\"))%> ',\n \"<% } %>\",\n \"<% } else { %>\",\n \"',\n '<% if( (library.get(\"public\")) && (library.get(\"deleted\") === false) ) { %>',\n ' ',\n \"<% }%>\",\n '\\'\" class=\"primary-button btn-xs edit_library_btn\" type=\"button\" style=\"<% if(button_config.edit_library_btn === false) { print(\"display:none;\") } %>\"> ',\n '/permissions\">\\'\" class=\"primary-button btn-xs permission_library_btn\" type=\"button\" style=\"<% if(button_config.permission_library_btn === false) { print(\"display:none;\") } %>\"> ',\n '\"> ',\n '\"> ',\n '\\'\" class=\"primary-button btn-xs delete_library_btn\" type=\"button\" style=\"<% if(button_config.delete_library_btn === false) { print(\"display:none;\") } %>\"> ',\n // For deleted libraries\n '\" class=\"fa fa-ban fa-lg\"> ',\n '\\' \" class=\"primary-button btn-xs undelete_library_btn\" type=\"button\" style=\"<% if(button_config.undelete_library_btn === false) { print(\"display:none;\") } %>\"> ',\n \" \",\n \" \"\n ].join(\"\")\n );\n }\n });\n\n return {\n LibraryRowView: LibraryRowView\n };\n});\n"]}
\ No newline at end of file
diff --git a/static/maps/mvc/library/library-librarytoolbar-view.js.map b/static/maps/mvc/library/library-librarytoolbar-view.js.map
index 3824955f195..02e1d604d3c 100644
--- a/static/maps/mvc/library/library-librarytoolbar-view.js.map
+++ b/static/maps/mvc/library/library-librarytoolbar-view.js.map
@@ -1 +1 @@
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\"mvc/library/library-model\"], function(\n mod_toastr,\n mod_library_model\n) {\n /**\n * This view represents the top part of the library page.\n * It contains the tool bar with controls.\n */\n var LibraryToolbarView = Backbone.View.extend({\n el: \"#center\",\n\n defaults: {\n search_term: \"\"\n },\n\n events: {\n \"click #create_new_library_btn\": \"createLibraryFromModal\",\n \"click #include_deleted_chk\": \"includeDeletedChecked\",\n \"click #exclude_restricted_chk\": \"excludeRestrictedChecked\",\n \"click #lib_page_size_prompt\": \"showPageSizePrompt\",\n \"keyup .library-search-input\": \"searchLibraries\"\n },\n\n initialize: function(options) {\n this.options = _.defaults(\n this.options || {},\n options,\n this.defaults\n );\n this.render();\n },\n\n render: function() {\n var toolbar_template = this.templateToolBar();\n var is_admin = false;\n var is_anonym = true;\n if (Galaxy.user) {\n is_admin = Galaxy.user.isAdmin();\n is_anonym = Galaxy.user.isAnonymous();\n }\n 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\ No newline at end of file
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\"mvc/library/library-model\"], function(\n mod_toastr,\n mod_library_model\n) {\n /**\n * This view represents the top part of the library page.\n * It contains the tool bar with controls.\n */\n var LibraryToolbarView = Backbone.View.extend({\n el: \"#center\",\n\n defaults: {\n search_term: \"\"\n },\n\n events: {\n \"click #create_new_library_btn\": \"createLibraryFromModal\",\n \"click #include_deleted_chk\": \"includeDeletedChecked\",\n \"click #exclude_restricted_chk\": \"excludeRestrictedChecked\",\n \"click .page_size_prompt\": \"showPageSizePrompt\",\n \"keyup .library-search-input\": \"searchLibraries\"\n },\n\n initialize: function(options) {\n this.options = _.defaults(\n this.options || {},\n options,\n this.defaults\n );\n this.render();\n },\n\n render: function() {\n var toolbar_template = this.templateToolBar();\n var is_admin = false;\n var is_anonym = true;\n if (Galaxy.user) {\n is_admin = Galaxy.user.isAdmin();\n is_anonym = Galaxy.user.isAnonymous();\n }\n this.$el.html(\n toolbar_template({ admin_user: is_admin, anon_user: is_anonym })\n );\n if (is_admin) {\n this.$el.find(\n \"#include_deleted_chk\"\n )[0].checked = Galaxy.libraries.preferences.get(\"with_deleted\");\n this.$el.find(\n \"#exclude_restricted_chk\"\n )[0].checked = Galaxy.libraries.preferences.get(\n \"without_restricted\"\n );\n }\n },\n\n /**\n * Renders the element that shows pages into its div within the toolbar.\n */\n renderPaginator: function(options) {\n this.options = _.extend(this.options, options);\n var paginator_template = this.templatePaginator();\n this.$el.find(\"#library_paginator\").html(\n paginator_template({\n show_page: parseInt(this.options.show_page),\n page_count: parseInt(this.options.page_count),\n total_libraries_count: this.options.total_libraries_count,\n libraries_shown: this.options.libraries_shown,\n library_page_size: Galaxy.libraries.preferences.get(\n \"library_page_size\"\n )\n })\n );\n },\n\n /**\n * User clicked on 'New library' button. Show modal to\n * satisfy the wish.\n */\n createLibraryFromModal: function(event) {\n event.preventDefault();\n event.stopPropagation();\n var self = this;\n this.modal = Galaxy.modal;\n this.modal.show({\n closing_events: true,\n title: \"Create New Library\",\n body: this.templateNewLibraryInModal(),\n buttons: {\n Create: function() {\n self.createNewLibrary();\n },\n Close: function() {\n self.modal.hide();\n }\n }\n });\n },\n\n /**\n * Create the new library using the API asynchronously.\n */\n createNewLibrary: function() {\n var libraryDetails = this.serializeNewLibrary();\n if (this.validateNewLibrary(libraryDetails)) {\n var library = new mod_library_model.Library();\n var self = this;\n library.save(libraryDetails, {\n success: function(library) {\n Galaxy.libraries.libraryListView.collection.add(\n library\n );\n self.modal.hide();\n self.clearLibraryModal();\n Galaxy.libraries.libraryListView.render();\n mod_toastr.success(\"Library created.\");\n },\n error: function(model, response) {\n if (typeof response.responseJSON !== \"undefined\") {\n mod_toastr.error(response.responseJSON.err_msg);\n } else {\n mod_toastr.error(\"An error occured.\");\n }\n }\n });\n } else {\n mod_toastr.error(\"Library's name is missing.\");\n }\n return false;\n },\n\n /**\n * Show user the propmpt to change the number of libs shown on page.\n */\n showPageSizePrompt: function(e) {\n e.preventDefault();\n var library_page_size = prompt(\n \"How many libraries per page do you want to see?\",\n Galaxy.libraries.preferences.get(\"library_page_size\")\n );\n if (\n library_page_size != null &&\n library_page_size == parseInt(library_page_size)\n ) {\n Galaxy.libraries.preferences.set({\n library_page_size: parseInt(library_page_size)\n });\n Galaxy.libraries.libraryListView.render({ show_page: 1 });\n }\n },\n\n /**\n * Clear the library modal once it is saved.\n */\n clearLibraryModal: function() {\n $(\"input[name='Name']\").val(\"\");\n $(\"input[name='Description']\").val(\"\");\n $(\"input[name='Synopsis']\").val(\"\");\n },\n\n /**\n * Prepare new library variables to be submitted to API.\n */\n serializeNewLibrary: function() {\n return {\n name: $(\"input[name='Name']\").val(),\n description: $(\"input[name='Description']\").val(),\n synopsis: $(\"input[name='Synopsis']\").val()\n };\n },\n\n /**\n * Check whether entered values are valid.\n */\n validateNewLibrary: function(libraryDetails) {\n return libraryDetails.name !== \"\";\n },\n\n /**\n * Include or exclude deleted libraries in the view.\n */\n includeDeletedChecked: function(event) {\n if (event.target.checked) {\n Galaxy.libraries.preferences.set({ with_deleted: true });\n Galaxy.libraries.libraryListView.fetchDeleted();\n } else {\n Galaxy.libraries.preferences.set({ with_deleted: false });\n Galaxy.libraries.libraryListView.render();\n }\n },\n\n /**\n * Include or exclude restricted libraries in the view.\n */\n excludeRestrictedChecked: function(event) {\n if (event.target.checked) {\n Galaxy.libraries.preferences.set({ without_restricted: true });\n } else {\n Galaxy.libraries.preferences.set({ without_restricted: false });\n }\n Galaxy.libraries.libraryListView.render();\n },\n\n /**\n * Take the contents of the search field and send it to the list view\n * to query the collection of libraries.\n */\n searchLibraries: function(event) {\n var search_term = $(\".library-search-input\").val();\n this.options.search_term = search_term;\n Galaxy.libraries.libraryListView.searchLibraries(search_term);\n },\n\n templateToolBar: function() {\n return _.template(\n [\n '',\n '
\",\n '
',\n // table with libraries will append here\n \"
\",\n \"
\",\n ' <%- libraries_shown %> libraries shown per page\" class=\"page_size_prompt\">(change) ',\n \" \",\n \"\",\n \" <%- total_libraries_count %> total\",\n \" \"\n ].join(\"\")\n );\n },\n\n templateNewLibraryInModal: function() {\n return _.template(\n [\n '',\n \"\",\n \"
\"\n ].join(\"\")\n );\n }\n });\n\n return {\n LibraryToolbarView: LibraryToolbarView\n };\n});\n"]}
\ No newline at end of file
diff --git a/static/scripts/mvc/library/library-dataset-view.js b/static/scripts/mvc/library/library-dataset-view.js
index 518209b75af..1cd1d4a8b56 100644
--- a/static/scripts/mvc/library/library-dataset-view.js
+++ b/static/scripts/mvc/library/library-dataset-view.js
@@ -1,2 +1,2 @@
-"use strict";define(["libs/toastr","mvc/library/library-model","utils/utils","mvc/ui/ui-select"],function(t,e,s,i){return{LibraryDatasetView:Backbone.View.extend({el:"#center",model:null,options:{},defaults:{edit_mode:!1},events:{"click .toolbtn_modify_dataset":"enableModification","click .toolbtn_cancel_modifications":"render","click .toolbtn-download-dataset":"downloadDataset","click .toolbtn-import-dataset":"importIntoHistory","click .copy-link-to-clipboard":"copyToClipboard","click .make-private":"makeDatasetPrivate","click .remove-restrictions":"removeDatasetRestrictions","click .toolbtn_save_permissions":"savePermissions","click .toolbtn_save_modifications":"saveModifications"},select_genome:null,select_extension:null,list_extensions:[],auto:{id:"auto",text:"Auto-detect",description:"This system will try to detect the file type automatically. If your file is not detected properly as one of the known formats, it most likely means that it has some format problems (e.g., different number of columns on different rows). You can still coerce the system to set your data to the format you think it should be. You can also upload compressed files, which will automatically be decompressed."},list_genomes:[],initialize:function(t){this.options=_.extend(this.options,t),this.fetchExtAndGenomes(),this.options.id&&this.fetchDataset()},fetchDataset:function(s){this.options=_.extend(this.options,s),this.model=new e.Item({id:this.options.id});var i=this;this.model.fetch({success:function(){i.options.show_permissions?i.showPermissions():i.options.show_version?i.fetchVersion():i.render()},error:function(e,s){void 0!==s.responseJSON?t.error(s.responseJSON.err_msg+" Click this to go back.","",{onclick:function(){Galaxy.libraries.library_router.back()}}):t.error("An error occurred. Click this to go back.","",{onclick:function(){Galaxy.libraries.library_router.back()}})}})},render:function(t){this.options=_.extend(this.options,t),$(".tooltip").remove();var e=this.templateDataset();this.$el.html(e({item:this.model})),$(".peek").html(this.model.get("peek")),$("#center [data-toggle]").tooltip()},fetchVersion:function(s){this.options=_.extend(this.options,s),that=this,this.options.ldda_id?(this.ldda=new e.Ldda({id:this.options.ldda_id}),this.ldda.url=this.ldda.urlRoot+this.model.id+"/versions/"+this.ldda.id,this.ldda.fetch({success:function(){that.renderVersion()},error:function(e,s){void 0!==s.responseJSON?t.error(s.responseJSON.err_msg):t.error("An error occurred.")}})):(this.render(),t.error("Library dataset version requested but no id provided."))},renderVersion:function(){$(".tooltip").remove();var t=this.templateVersion();this.$el.html(t({item:this.model,ldda:this.ldda})),$(".peek").html(this.ldda.get("peek"))},enableModification:function(){$(".tooltip").remove();var t=this.templateModifyDataset();this.$el.html(t({item:this.model})),this.renderSelectBoxes({genome_build:this.model.get("genome_build"),file_ext:this.model.get("file_ext")}),$(".peek").html(this.model.get("peek")),$("#center [data-toggle]").tooltip()},downloadDataset:function(){var t=Galaxy.root+"api/libraries/datasets/download/uncompressed",e={ld_ids:this.id};this.processDownload(t,e)},processDownload:function(e,s,i){if(e&&s){s="string"==typeof s?s:$.param(s);var a="";$.each(s.split("&"),function(){var t=this.split("=");a+='0))return void t.warning("Library dataset name has to be at least 1 character long.");i.set("name",a),s=!0}var o=this.$el.find(".input_dataset_misc_info").val();void 0!==o&&o!==i.get("misc_info")&&(i.set("misc_info",o),s=!0);var r=this.select_genome.$el.select2("data").id;void 0!==r&&r!==i.get("genome_build")&&(i.set("genome_build",r),s=!0);var n=this.select_extension.$el.select2("data").id;void 0!==n&&n!==i.get("file_ext")&&(i.set("file_ext",n),s=!0);var l=this;s?i.save(null,{patch:!0,success:function(e){l.render(),t.success("Changes to library dataset saved.")},error:function(e,s){void 0!==s.responseJSON?t.error(s.responseJSON.err_msg):t.error("An error occured while attempting to update the library dataset.")}}):(l.render(),t.info("Nothing has changed."))},copyToClipboard:function(){var t=Backbone.history.location.href;-1!==t.lastIndexOf("/permissions")&&(t=t.substr(0,t.lastIndexOf("/permissions"))),window.prompt("Copy to clipboard: Ctrl+C, Enter",t)},makeDatasetPrivate:function(){var e=this;$.post(Galaxy.root+"api/libraries/datasets/"+e.id+"/permissions?action=make_private").done(function(s){e.model.set({is_unrestricted:!1}),e.showPermissions({fetched_permissions:s}),t.success("The dataset is now private to you.")}).fail(function(){t.error("An error occurred while attempting to make dataset private.")})},removeDatasetRestrictions:function(){var e=this;$.post(Galaxy.root+"api/libraries/datasets/"+e.id+"/permissions?action=remove_restrictions").done(function(s){e.model.set({is_unrestricted:!0}),e.showPermissions({fetched_permissions:s}),t.success("Access to this dataset is now unrestricted.")}).fail(function(){t.error("An error occurred while attempting to make dataset unrestricted.")})},_extractIds:function(t){for(var e=[],s=t.length-1;s>=0;s--)e.push(t[s].id);return e},savePermissions:function(e){var s=this,i=this._extractIds(this.accessSelectObject.$el.select2("data")),a=this._extractIds(this.manageSelectObject.$el.select2("data")),o=this._extractIds(this.modifySelectObject.$el.select2("data"));$.post(Galaxy.root+"api/libraries/datasets/"+s.id+"/permissions?action=set_permissions",{"access_ids[]":i,"manage_ids[]":a,"modify_ids[]":o}).done(function(e){s.showPermissions({fetched_permissions:e}),t.success("Permissions saved.")}).fail(function(){t.error("An error occurred while attempting to set dataset permissions.")})},fetchExtAndGenomes:function(){var t=this;0==this.list_genomes.length&&s.get({url:Galaxy.root+"api/datatypes?extension_only=False",success:function(e){for(var s in e)t.list_extensions.push({id:e[s].extension,text:e[s].extension,description:e[s].description,description_url:e[s].description_url});t.list_extensions.sort(function(t,e){return t.id>e.id?1:t.ide.id?1:t.id','",'','Libraries <%- path_item[1] %> <%- path_item[1] %> ",'<% if (item.get("is_unrestricted")) { %>',"",'This dataset is unrestricted so everybody with the link can access it. Just share
this page .',"
','
',"",'">Name ','<%= _.escape(item.get("name")) %> '," ",'<% if (item.get("file_ext")) { %>',"",'Data type ','<%= _.escape(item.get("file_ext")) %> '," ","<% } %>",'<% if (item.get("genome_build")) { %>',"",'Genome build ','<%= _.escape(item.get("genome_build")) %> '," ","<% } %>",'<% if (item.get("file_size")) { %>',"",'Size ','<%= _.escape(item.get("file_size")) %> '," ","<% } %>",'<% if (item.get("date_uploaded")) { %>',"",'Date uploaded (UTC) ','<%= _.escape(item.get("date_uploaded")) %> '," ","<% } %>",'<% if (item.get("uploaded_by")) { %>',"",'Uploaded by ','<%= _.escape(item.get("uploaded_by")) %> '," ","<% } %>",'<% if (item.get("metadata_data_lines")) { %>',"",'Data Lines ','<%= _.escape(item.get("metadata_data_lines")) %> '," ","<% } %>",'<% if (item.get("metadata_comment_lines")) { %>',"",'Comment Lines ','<%= _.escape(item.get("metadata_comment_lines")) %> '," ","<% } %>",'<% if (item.get("metadata_columns")) { %>',"",'Number of Columns ','<%= _.escape(item.get("metadata_columns")) %> '," ","<% } %>",'<% if (item.get("metadata_column_types")) { %>',"",'Column Types ','<%= _.escape(item.get("metadata_column_types")) %> '," ","<% } %>",'<% if (item.get("message")) { %>',"",'Message ','<%= _.escape(item.get("message")) %> '," ","<% } %>",'<% if (item.get("misc_blurb")) { %>',"",'Misc. blurb ','<%= _.escape(item.get("misc_blurb")) %> '," ","<% } %>",'<% if (item.get("misc_info")) { %>',"",'Misc. info ','<%= _.escape(item.get("misc_info")) %> '," ","<% } %>",'<% if (item.get("tags")) { %>',"",'Tags ','<%= _.escape(item.get("tags")) %> '," ","<% } %>","
","
",'<% if (item.get("has_versions")) { %>',"
","<% } %>","