From 0ea6272f5d35a769bc63a4706c503793fa903fe2 Mon Sep 17 00:00:00 2001 From: Dannon Baker Date: Fri, 15 Sep 2017 10:34:48 -0400 Subject: [PATCH] More spelling. --- .../scripts/mvc/library/library-folder-view.js | 2 +- .../scripts/mvc/library/library-folderlist-view.js | 2 +- .../mvc/library/library-foldertoolbar-view.js | 14 +++++++------- .../scripts/mvc/library/library-library-view.js | 2 +- .../mvc/library/library-librarylist-view.js | 4 ++-- .../scripts/mvc/groups/group-detail-view.js | 2 +- .../toolshed/scripts/mvc/groups/group-list-view.js | 2 +- static/maps/mvc/library/library-folder-view.js.map | 2 +- .../mvc/library/library-folderlist-view.js.map | 2 +- .../mvc/library/library-foldertoolbar-view.js.map | 2 +- .../maps/mvc/library/library-library-view.js.map | 2 +- .../mvc/library/library-librarylist-view.js.map | 2 +- static/scripts/mvc/library/library-folder-view.js | 2 +- .../scripts/mvc/library/library-folderlist-view.js | 2 +- .../mvc/library/library-foldertoolbar-view.js | 2 +- static/scripts/mvc/library/library-library-view.js | 2 +- .../mvc/library/library-librarylist-view.js | 2 +- .../scripts/mvc/groups/group-detail-view.js | 2 +- .../toolshed/scripts/mvc/groups/group-list-view.js | 2 +- 19 files changed, 26 insertions(+), 26 deletions(-) diff --git a/client/galaxy/scripts/mvc/library/library-folder-view.js b/client/galaxy/scripts/mvc/library/library-folder-view.js index 1bb1b901fb9..15dad17594d 100644 --- a/client/galaxy/scripts/mvc/library/library-folder-view.js +++ b/client/galaxy/scripts/mvc/library/library-folder-view.js @@ -43,7 +43,7 @@ var FolderView = Backbone.View.extend({ if (typeof response.responseJSON !== "undefined"){ mod_toastr.error(response.responseJSON.err_msg + ' Click this to go back.', '', {onclick: function() {Galaxy.libraries.library_router.back();}}); } else { - mod_toastr.error('An error ocurred. Click this to go back.', '', {onclick: function() {Galaxy.libraries.library_router.back();}}); + mod_toastr.error('An error occurred. Click this to go back.', '', {onclick: function() {Galaxy.libraries.library_router.back();}}); } } }); diff --git a/client/galaxy/scripts/mvc/library/library-folderlist-view.js b/client/galaxy/scripts/mvc/library/library-folderlist-view.js index 6b8e34ff276..febd7d705e6 100644 --- a/client/galaxy/scripts/mvc/library/library-folderlist-view.js +++ b/client/galaxy/scripts/mvc/library/library-folderlist-view.js @@ -82,7 +82,7 @@ var FolderListView = Backbone.View.extend({ if ( typeof response.responseJSON !== "undefined" ){ mod_toastr.error( response.responseJSON.err_msg + ' Click this to go back.', '', { onclick: function() { Galaxy.libraries.library_router.back(); } } ); } else { - mod_toastr.error( 'An error ocurred. Click this to go back.', '', { onclick: function() { Galaxy.libraries.library_router.back(); } } ); + mod_toastr.error( 'An error occurred. Click this to go back.', '', { onclick: function() { Galaxy.libraries.library_router.back(); } } ); } } }); diff --git a/client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js b/client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js index 447e00f8482..9139db3a264 100644 --- a/client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js +++ b/client/galaxy/scripts/mvc/library/library-foldertoolbar-view.js @@ -182,7 +182,7 @@ var FolderToolbarView = Backbone.View.extend({ if (typeof response.responseJSON !== "undefined"){ mod_toastr.error(response.responseJSON.err_msg); } else { - mod_toastr.error('An error ocurred.'); + mod_toastr.error('An error occurred.'); } } }); @@ -231,7 +231,7 @@ var FolderToolbarView = Backbone.View.extend({ if (typeof response.responseJSON !== "undefined"){ mod_toastr.error(response.responseJSON.err_msg); } else { - mod_toastr.error('An error ocurred.'); + mod_toastr.error('An error occurred.'); } }); } @@ -251,7 +251,7 @@ var FolderToolbarView = Backbone.View.extend({ that.processImportToHistory(new_history.id, new_history.name); }) .fail(function( xhr, status, error ) { - mod_toastr.error('An error ocurred.'); + mod_toastr.error('An error occurred.'); }) .always(function() { that.modal.enableButton('Import'); @@ -390,7 +390,7 @@ var FolderToolbarView = Backbone.View.extend({ if (typeof response.responseJSON !== "undefined"){ mod_toastr.error(response.responseJSON.err_msg); } else { - mod_toastr.error('An error ocurred.'); + mod_toastr.error('An error occurred.'); } }); }, @@ -587,7 +587,7 @@ var FolderToolbarView = Backbone.View.extend({ mod_toastr.error(response.responseJSON.err_msg); } } else { - mod_toastr.error('An error ocurred.'); + mod_toastr.error('An error occurred.'); } } }) @@ -740,7 +740,7 @@ var FolderToolbarView = Backbone.View.extend({ if (typeof response.responseJSON !== "undefined"){ mod_toastr.error(response.responseJSON.err_msg); } else { - mod_toastr.error('An error ocurred.'); + mod_toastr.error('An error occurred.'); } } }); @@ -1063,7 +1063,7 @@ var FolderToolbarView = Backbone.View.extend({ if (typeof response.responseJSON !== "undefined"){ mod_toastr.error(response.responseJSON.err_msg); } else { - mod_toastr.error('An error ocurred.'); + mod_toastr.error('An error occurred.'); } } }) diff --git a/client/galaxy/scripts/mvc/library/library-library-view.js b/client/galaxy/scripts/mvc/library/library-library-view.js index 4847f6f9a26..6c2a9f5da0c 100644 --- a/client/galaxy/scripts/mvc/library/library-library-view.js +++ b/client/galaxy/scripts/mvc/library/library-library-view.js @@ -43,7 +43,7 @@ var LibraryView = Backbone.View.extend({ if (typeof response.responseJSON !== "undefined"){ mod_toastr.error(response.responseJSON.err_msg + ' Click this to go back.', '', {onclick: function() {Galaxy.libraries.library_router.back();}}); } else { - mod_toastr.error('An error ocurred. Click this to go back.', '', {onclick: function() {Galaxy.libraries.library_router.back();}}); + mod_toastr.error('An error occurred. Click this to go back.', '', {onclick: function() {Galaxy.libraries.library_router.back();}}); } } }); diff --git a/client/galaxy/scripts/mvc/library/library-librarylist-view.js b/client/galaxy/scripts/mvc/library/library-librarylist-view.js index 89b316bfe05..9ac2ccdf866 100644 --- a/client/galaxy/scripts/mvc/library/library-librarylist-view.js +++ b/client/galaxy/scripts/mvc/library/library-librarylist-view.js @@ -43,7 +43,7 @@ var LibraryListView = Backbone.View.extend({ if ( typeof response.responseJSON !== "undefined" ){ mod_toastr.error( response.responseJSON.err_msg ); } else { - mod_toastr.error( 'An error ocurred.' ); + mod_toastr.error( 'An error occurred.' ); } } }); @@ -138,7 +138,7 @@ var LibraryListView = Backbone.View.extend({ if ( typeof response.responseJSON !== "undefined" ){ mod_toastr.error( response.responseJSON.err_msg ); } else { - mod_toastr.error( 'An error ocurred.' ); + mod_toastr.error( 'An error occurred.' ); } } }); diff --git a/client/toolshed/scripts/mvc/groups/group-detail-view.js b/client/toolshed/scripts/mvc/groups/group-detail-view.js index c5825504e2a..12da886b178 100644 --- a/client/toolshed/scripts/mvc/groups/group-detail-view.js +++ b/client/toolshed/scripts/mvc/groups/group-detail-view.js @@ -40,7 +40,7 @@ var GroupDetailView = Backbone.View.extend({ if ( typeof response.responseJSON !== "undefined" ){ mod_toastr.error( response.responseJSON.err_msg ); } else { - mod_toastr.error( 'An error ocurred.' ); + mod_toastr.error( 'An error occurred.' ); } } }); diff --git a/client/toolshed/scripts/mvc/groups/group-list-view.js b/client/toolshed/scripts/mvc/groups/group-list-view.js index 1fe74d52aef..fd6e2a1e8c2 100644 --- a/client/toolshed/scripts/mvc/groups/group-list-view.js +++ b/client/toolshed/scripts/mvc/groups/group-list-view.js @@ -32,7 +32,7 @@ var GroupListView = Backbone.View.extend({ if ( typeof response.responseJSON !== "undefined" ){ mod_toastr.error( response.responseJSON.err_msg ); } 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','
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",'","
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","
"].join(""))}});return{FolderView:d}}); //# sourceMappingURL=../../../maps/mvc/library/library-folder-view.js.map \ No newline at end of file diff --git a/static/scripts/mvc/library/library-folderlist-view.js b/static/scripts/mvc/library/library-folderlist-view.js index 44e82d4bc64..2845f003701 100644 --- a/static/scripts/mvc/library/library-folderlist-view.js +++ b/static/scripts/mvc/library/library-folderlist-view.js @@ -1,2 +1,2 @@ -define(["layout/masthead","utils/utils","libs/toastr","mvc/library/library-model","mvc/library/library-folderrow-view","mvc/library/library-dataset-view"],function(a,b,c,d,e){var f=Backbone.View.extend({el:"#folder_items_element",progress:0,progressStep:1,folderContainer:null,sort:"asc",events:{"click #select-all-checkboxes":"selectAll","click .dataset_row":"selectClickedRow","click .folder_row":"selectClickedRow","click .sort-folder-link":"sortColumnClicked"},collection:null,defaults:{include_deleted:!1,page_count:null,show_page:null},initialize:function(a){this.options=_.defaults(this.options||{},this.defaults,a),this.modal=null,this.rowViews={},this.collection=new d.Folder,this.listenTo(this.collection,"add",this.renderOne),this.listenTo(this.collection,"remove",this.removeOne),this.listenTo(this.collection,"sort",this.rePaint),this.listenTo(this.collection,"reset",this.rePaint),this.fetchFolder()},fetchFolder:function(a){var a=a||{};this.options.include_deleted=a.include_deleted;var b=this;this.folderContainer=new d.FolderContainer({id:this.options.id}),this.folderContainer.url=this.folderContainer.attributes.urlRoot+this.options.id+"/contents",this.options.include_deleted&&(this.folderContainer.url=this.folderContainer.url+"?include_deleted=true"),this.folderContainer.fetch({success:function(a){b.folder_container=a,b.render()},error:function(a,b){"undefined"!=typeof b.responseJSON?c.error(b.responseJSON.err_msg+" Click this to go back.","",{onclick:function(){Galaxy.libraries.library_router.back()}}):c.error("An error ocurred. Click this to go back.","",{onclick:function(){Galaxy.libraries.library_router.back()}})}})},render:function(a){this.options=_.extend(this.options,a);var b=this.templateFolder();$(".tooltip").hide();var d,e=this.folderContainer.attributes.metadata.full_path;if(d=1===e.length?0:e[e.length-2][0],this.$el.html(b({path:this.folderContainer.attributes.metadata.full_path,parent_library_id:this.folderContainer.attributes.metadata.parent_library_id,id:this.options.id,upper_folder_id:d,order:this.sort})),this.options.dataset_id){var f=_.findWhere(that.rowViews,{id:this.options.dataset_id});f?f.showDatasetDetails():c.error("Requested dataset not found. Showing folder instead.")}else(null===this.options.show_page||this.options.show_page<1)&&(this.options.show_page=1),this.paginate();$("#center [data-toggle]").tooltip(),$("#center").css("overflow","auto")},paginate:function(a){this.options=_.extend(this.options,a),(null===this.options.show_page||this.options.show_page<1)&&(this.options.show_page=1),this.options.total_items_count=this.folder_container.get("folder").models.length,this.options.page_count=Math.ceil(this.options.total_items_count/Galaxy.libraries.preferences.get("folder_page_size"));var b=Galaxy.libraries.preferences.get("folder_page_size")*(this.options.show_page-1),c=null;c=this.folder_container.get("folder").models.slice(b,b+Galaxy.libraries.preferences.get("folder_page_size")),this.options.items_shown=c.length,Galaxy.libraries.preferences.get("folder_page_size")*this.options.show_page>this.options.total_items_count+Galaxy.libraries.preferences.get("folder_page_size")&&(c=[]),Galaxy.libraries.folderToolbarView.renderPaginator(this.options),this.collection.reset(c)},rePaint:function(a){this.options=_.extend(this.options,a),this.removeAllRows(),this.renderAll(),this.checkEmptiness()},addAll:function(a){_.each(a,function(a){Galaxy.libraries.folderListView.collection.add(a,{sort:!1})}),$("#center [data-toggle]").tooltip(),this.checkEmptiness(),this.postRender()},postRender:function(){var a=this.folderContainer.attributes.metadata;a.contains_file_or_folder="undefined"!=typeof this.collection.findWhere({type:"file"})||"undefined"!=typeof this.collection.findWhere({type:"folder"}),Galaxy.libraries.folderToolbarView.configureElements(a)},renderAll:function(){var a=this;_.each(this.collection.models.reverse(),function(b){a.renderOne(b)}),this.postRender()},renderOne:function(a){this.options.contains_file_or_folder=!0,a.set("folder_id",this.id);var b=new e.FolderRowView({model:a});this.rowViews[a.get("id")]=b,this.$el.find("#first_folder_item").after(b.el)},removeOne:function(a){this.$el.find("tr").filter(function(){return $(this).data("id")&&$(this).data("id")===a.id}).remove()},removeAllRows:function(){$(".library-row").remove()},checkEmptiness:function(){0===this.$el.find(".dataset_row").length&&0===this.$el.find(".folder_row").length?this.$el.find(".empty-folder-message").show():this.$el.find(".empty-folder-message").hide()},sortColumnClicked:function(a){a.preventDefault(),"asc"===this.sort?(this.sortFolder("name","desc"),this.sort="desc"):(this.sortFolder("name","asc"),this.sort="asc"),this.renderSortIcon()},sortFolder:function(a,b){if("undefined"===a&&"undefined"===b)return this.collection.sortByNameAsc();if("name"===a){if("asc"===b)return this.collection.sortByNameAsc();if("desc"===b)return this.collection.sortByNameDesc()}},selectAll:function(a){var b=a.target.checked;that=this,$(":checkbox","#folder_list_body").each(function(){this.checked=b;var a=$(this).closest("tr");b?that.makeDarkRow(a):that.makeWhiteRow(a)})},selectClickedRow:function(a){var b,c,d="";b=$(a.target).closest("tr"),"input"===a.target.localName?(d=a.target,c="input"):"td"===a.target.localName&&(d=b.find(":checkbox")[0],c="td"),d.checked?"td"===c?(d.checked="",this.makeWhiteRow(b)):"input"===c&&this.makeDarkRow(b):"td"===c?(d.checked="selected",this.makeDarkRow(b)):"input"===c&&this.makeWhiteRow(b)},makeDarkRow:function(a){a.removeClass("light").addClass("dark"),a.find("a").removeClass("light").addClass("dark"),a.find(".fa-file-o").removeClass("fa-file-o").addClass("fa-file"),a.find(".fa-folder-o").removeClass("fa-folder-o").addClass("fa-folder")},makeWhiteRow:function(a){a.removeClass("dark").addClass("light"),a.find("a").removeClass("dark").addClass("light"),a.find(".fa-file").removeClass("fa-file").addClass("fa-file-o"),a.find(".fa-folder").removeClass("fa-folder").addClass("fa-folder-o")},renderSortIcon:function(){"asc"===this.sort?$(".sort-icon").removeClass("fa-sort-alpha-desc").addClass("fa-sort-alpha-asc"):$(".sort-icon").removeClass("fa-sort-alpha-asc").addClass("fa-sort-alpha-desc")},templateFolder:function(){return _.template(['
    ','
  1. Libraries
    2. ',"<% _.each(path, function(path_item) { %>","<% if (path_item[0] != id) { %>",'
  2. <%- path_item[1] %>
    3. ',"<% } else { %>",'
  3. <%- path_item[1] %>
    4. ',"<% } %>","<% }); %>","
",'',"",'','','','','','','',' ',"",'','',"","","","","","","","","","","
name descriptiondata typesizetime updated (UTC)
",'" title="Go to parent folder" class="btn_open_folder btn btn-default btn-xs">..',"
",'"].join(""))}});return{FolderListView:f}}); +define(["layout/masthead","utils/utils","libs/toastr","mvc/library/library-model","mvc/library/library-folderrow-view","mvc/library/library-dataset-view"],function(a,b,c,d,e){var f=Backbone.View.extend({el:"#folder_items_element",progress:0,progressStep:1,folderContainer:null,sort:"asc",events:{"click #select-all-checkboxes":"selectAll","click .dataset_row":"selectClickedRow","click .folder_row":"selectClickedRow","click .sort-folder-link":"sortColumnClicked"},collection:null,defaults:{include_deleted:!1,page_count:null,show_page:null},initialize:function(a){this.options=_.defaults(this.options||{},this.defaults,a),this.modal=null,this.rowViews={},this.collection=new d.Folder,this.listenTo(this.collection,"add",this.renderOne),this.listenTo(this.collection,"remove",this.removeOne),this.listenTo(this.collection,"sort",this.rePaint),this.listenTo(this.collection,"reset",this.rePaint),this.fetchFolder()},fetchFolder:function(a){var a=a||{};this.options.include_deleted=a.include_deleted;var b=this;this.folderContainer=new d.FolderContainer({id:this.options.id}),this.folderContainer.url=this.folderContainer.attributes.urlRoot+this.options.id+"/contents",this.options.include_deleted&&(this.folderContainer.url=this.folderContainer.url+"?include_deleted=true"),this.folderContainer.fetch({success:function(a){b.folder_container=a,b.render()},error:function(a,b){"undefined"!=typeof b.responseJSON?c.error(b.responseJSON.err_msg+" Click this to go back.","",{onclick:function(){Galaxy.libraries.library_router.back()}}):c.error("An error occurred. Click this to go back.","",{onclick:function(){Galaxy.libraries.library_router.back()}})}})},render:function(a){this.options=_.extend(this.options,a);var b=this.templateFolder();$(".tooltip").hide();var d,e=this.folderContainer.attributes.metadata.full_path;if(d=1===e.length?0:e[e.length-2][0],this.$el.html(b({path:this.folderContainer.attributes.metadata.full_path,parent_library_id:this.folderContainer.attributes.metadata.parent_library_id,id:this.options.id,upper_folder_id:d,order:this.sort})),this.options.dataset_id){var f=_.findWhere(that.rowViews,{id:this.options.dataset_id});f?f.showDatasetDetails():c.error("Requested dataset not found. Showing folder instead.")}else(null===this.options.show_page||this.options.show_page<1)&&(this.options.show_page=1),this.paginate();$("#center [data-toggle]").tooltip(),$("#center").css("overflow","auto")},paginate:function(a){this.options=_.extend(this.options,a),(null===this.options.show_page||this.options.show_page<1)&&(this.options.show_page=1),this.options.total_items_count=this.folder_container.get("folder").models.length,this.options.page_count=Math.ceil(this.options.total_items_count/Galaxy.libraries.preferences.get("folder_page_size"));var b=Galaxy.libraries.preferences.get("folder_page_size")*(this.options.show_page-1),c=null;c=this.folder_container.get("folder").models.slice(b,b+Galaxy.libraries.preferences.get("folder_page_size")),this.options.items_shown=c.length,Galaxy.libraries.preferences.get("folder_page_size")*this.options.show_page>this.options.total_items_count+Galaxy.libraries.preferences.get("folder_page_size")&&(c=[]),Galaxy.libraries.folderToolbarView.renderPaginator(this.options),this.collection.reset(c)},rePaint:function(a){this.options=_.extend(this.options,a),this.removeAllRows(),this.renderAll(),this.checkEmptiness()},addAll:function(a){_.each(a,function(a){Galaxy.libraries.folderListView.collection.add(a,{sort:!1})}),$("#center [data-toggle]").tooltip(),this.checkEmptiness(),this.postRender()},postRender:function(){var a=this.folderContainer.attributes.metadata;a.contains_file_or_folder="undefined"!=typeof this.collection.findWhere({type:"file"})||"undefined"!=typeof this.collection.findWhere({type:"folder"}),Galaxy.libraries.folderToolbarView.configureElements(a)},renderAll:function(){var a=this;_.each(this.collection.models.reverse(),function(b){a.renderOne(b)}),this.postRender()},renderOne:function(a){this.options.contains_file_or_folder=!0,a.set("folder_id",this.id);var b=new e.FolderRowView({model:a});this.rowViews[a.get("id")]=b,this.$el.find("#first_folder_item").after(b.el)},removeOne:function(a){this.$el.find("tr").filter(function(){return $(this).data("id")&&$(this).data("id")===a.id}).remove()},removeAllRows:function(){$(".library-row").remove()},checkEmptiness:function(){0===this.$el.find(".dataset_row").length&&0===this.$el.find(".folder_row").length?this.$el.find(".empty-folder-message").show():this.$el.find(".empty-folder-message").hide()},sortColumnClicked:function(a){a.preventDefault(),"asc"===this.sort?(this.sortFolder("name","desc"),this.sort="desc"):(this.sortFolder("name","asc"),this.sort="asc"),this.renderSortIcon()},sortFolder:function(a,b){if("undefined"===a&&"undefined"===b)return this.collection.sortByNameAsc();if("name"===a){if("asc"===b)return this.collection.sortByNameAsc();if("desc"===b)return this.collection.sortByNameDesc()}},selectAll:function(a){var b=a.target.checked;that=this,$(":checkbox","#folder_list_body").each(function(){this.checked=b;var a=$(this).closest("tr");b?that.makeDarkRow(a):that.makeWhiteRow(a)})},selectClickedRow:function(a){var b,c,d="";b=$(a.target).closest("tr"),"input"===a.target.localName?(d=a.target,c="input"):"td"===a.target.localName&&(d=b.find(":checkbox")[0],c="td"),d.checked?"td"===c?(d.checked="",this.makeWhiteRow(b)):"input"===c&&this.makeDarkRow(b):"td"===c?(d.checked="selected",this.makeDarkRow(b)):"input"===c&&this.makeWhiteRow(b)},makeDarkRow:function(a){a.removeClass("light").addClass("dark"),a.find("a").removeClass("light").addClass("dark"),a.find(".fa-file-o").removeClass("fa-file-o").addClass("fa-file"),a.find(".fa-folder-o").removeClass("fa-folder-o").addClass("fa-folder")},makeWhiteRow:function(a){a.removeClass("dark").addClass("light"),a.find("a").removeClass("dark").addClass("light"),a.find(".fa-file").removeClass("fa-file").addClass("fa-file-o"),a.find(".fa-folder").removeClass("fa-folder").addClass("fa-folder-o")},renderSortIcon:function(){"asc"===this.sort?$(".sort-icon").removeClass("fa-sort-alpha-desc").addClass("fa-sort-alpha-asc"):$(".sort-icon").removeClass("fa-sort-alpha-asc").addClass("fa-sort-alpha-desc")},templateFolder:function(){return _.template(['
    ','
  1. Libraries
    2. ',"<% _.each(path, function(path_item) { %>","<% if (path_item[0] != id) { %>",'
  2. <%- path_item[1] %>
    3. ',"<% } else { %>",'
  3. <%- path_item[1] %>
    4. ',"<% } %>","<% }); %>","
",'',"",'','','','','','','',' ',"",'','',"","","","","","","","","","","
name descriptiondata typesizetime updated (UTC)
",'" title="Go to parent folder" class="btn_open_folder btn btn-default btn-xs">..',"
",'"].join(""))}});return{FolderListView:f}}); //# sourceMappingURL=../../../maps/mvc/library/library-folderlist-view.js.map \ No newline at end of file diff --git a/static/scripts/mvc/library/library-foldertoolbar-view.js b/static/scripts/mvc/library/library-foldertoolbar-view.js index 472e14b9ce6..7cbc79600a9 100644 --- a/static/scripts/mvc/library/library-foldertoolbar-view.js +++ b/static/scripts/mvc/library/library-foldertoolbar-view.js @@ -1,4 +1,4 @@ -define(["layout/masthead","utils/utils","libs/toastr","mvc/library/library-model","mvc/ui/ui-select"],function(a,b,c,d,e){var f=Backbone.View.extend({el:"#center",events:{"click #toolbtn_create_folder":"createFolderFromModal","click #toolbtn_bulk_import":"modalBulkImport","click #include_deleted_datasets_chk":"checkIncludeDeleted","click #toolbtn_bulk_delete":"deleteSelectedItems","click .toolbtn-show-locinfo":"showLocInfo","click .page_size_prompt":"showPageSizePrompt"},defaults:{can_add_library_item:!1,contains_file_or_folder:!1,chain_call_control:{total_number:0,failed_number:0},disabled_jstree_element:"folders"},modal:null,jstree:null,histories:null,select_genome:null,select_extension:null,list_extensions:[],auto:{id:"auto",text:"Auto-detect",description:"This system will try to detect the file type automatically. If your file is not detected properly as one of the known formats, it most likely means that it has some format problems (e.g., different number of columns on different rows). You can still coerce the system to set your data to the format you think it should be. You can also upload compressed files, which will automatically be decompressed."},list_genomes:[],initialize:function(a){this.options=_.defaults(a||{},this.defaults),this.fetchExtAndGenomes(),this.render()},render:function(a){this.options=_.extend(this.options,a);var b=this.templateToolBar(),c={id:this.options.id,is_admin:!1,is_anonym:!0,mutiple_add_dataset_options:!1};Galaxy.user&&(c.is_admin=Galaxy.user.isAdmin(),c.is_anonym=Galaxy.user.isAnonymous(),(null!==Galaxy.config.user_library_import_dir||Galaxy.config.allow_library_path_paste!==!1||null!==Galaxy.config.library_import_dir)&&(c.mutiple_add_dataset_options=!0)),this.$el.html(b(c))},renderPaginator:function(a){this.options=_.extend(this.options,a);var b=this.templatePaginator();$("body").find(".folder-paginator").html(b({id:this.options.id,show_page:parseInt(this.options.show_page),page_count:parseInt(this.options.page_count),total_items_count:this.options.total_items_count,items_shown:this.options.items_shown}))},configureElements:function(a){this.options=_.extend(this.options,a),this.options.can_add_library_item===!0?$(".add-library-items").show():$(".add-library-items").hide(),this.options.contains_file_or_folder===!0&&Galaxy.user?Galaxy.user.isAnonymous()?($(".dataset-manipulation").show(),$(".logged-dataset-manipulation").hide()):($(".logged-dataset-manipulation").show(),$(".dataset-manipulation").show()):($(".logged-dataset-manipulation").hide(),$(".dataset-manipulation").hide()),this.$el.find("[data-toggle]").tooltip()},createFolderFromModal:function(a){a.preventDefault(),a.stopPropagation();var b=this,c=this.templateNewFolderInModal();this.modal=Galaxy.modal,this.modal.show({closing_events:!0,title:"Create New Folder",body:c(),buttons:{Create:function(){b.create_new_folder_event()},Close:function(){Galaxy.modal.hide()}}})},create_new_folder_event:function(){var a=this.serialize_new_folder();if(this.validate_new_folder(a)){var b,e=new d.FolderAsModel,f=Backbone.history.fragment.split("/");b=f.indexOf("page")>-1?f[f.length-3]:f[f.length-1],e.url=e.urlRoot+b,e.save(a,{success:function(a){Galaxy.modal.hide(),c.success("Folder created."),a.set({type:"folder"}),Galaxy.libraries.folderListView.collection.add(a)},error:function(a,b){Galaxy.modal.hide(),c.error("undefined"!=typeof b.responseJSON?b.responseJSON.err_msg:"An error ocurred.")}})}else c.error("Folder's name is missing.");return!1},serialize_new_folder:function(){return{name:$("input[name='Name']").val(),description:$("input[name='Description']").val()}},validate_new_folder:function(a){return""!==a.name},modalBulkImport:function(){var a=$("#folder_table").find(":checked");if(0===a.length)c.info("You must select some datasets first.");else{var b=this;this.histories=new d.GalaxyHistories,this.histories.fetch().done(function(){var a=b.templateBulkImportInModal();b.modal=Galaxy.modal,b.modal.show({closing_events:!0,title:"Import into History",body:a({histories:b.histories.models}),buttons:{Import:function(){b.importAllIntoHistory()},Close:function(){Galaxy.modal.hide()}}})}).fail(function(a,b){c.error("undefined"!=typeof b.responseJSON?b.responseJSON.err_msg:"An error ocurred.")})}},importAllIntoHistory:function(){this.modal.disableButton("Import");var a=this.modal.$("input[name=history_name]").val(),b=this;if(""!==a)$.post(Galaxy.root+"api/histories",{name:a}).done(function(a){b.options.last_used_history_id=a.id,b.processImportToHistory(a.id,a.name)}).fail(function(){c.error("An error ocurred.")}).always(function(){b.modal.enableButton("Import")});else{var d=$("select[name=dataset_import_bulk] option:selected").val();this.options.last_used_history_id=d;var e=$("select[name=dataset_import_bulk] option:selected").text();this.processImportToHistory(d,e),this.modal.enableButton("Import")}},processImportToHistory:function(a,b){var c=[],e=[];$("#folder_table").find(":checked").each(function(){var a=$(this).closest("tr").data("id");"F"==a.substring(0,1)?e.push(a):c.push(a)});for(var f=[],g=c.length-1;g>=0;g--){var h=c[g],i=new d.HistoryItem;i.url=i.urlRoot+a+"/contents",i.content=h,i.source="library",f.push(i)}for(var g=e.length-1;g>=0;g--){var j=e[g],i=new d.HistoryItem;i.url=i.urlRoot+a+"/contents",i.content=j,i.source="library_folder",f.push(i)}this.initChainCallControl({length:f.length,action:"to_history",history_name:b}),jQuery.getJSON(Galaxy.root+"history/set_as_current?id="+a),this.chainCallImportingIntoHistory(f,b)},updateProgress:function(){this.progress+=this.progressStep,$(".progress-bar-import").width(Math.round(this.progress)+"%");var a=Math.round(this.progress)+"% Complete";$(".completion_span").text(a)},download:function(a,b){var c=[],d=[];$("#folder_table").find(":checked").each(function(){var a=$(this).closest("tr").data("id");"F"==a.substring(0,1)?d.push(a):c.push(a)});var e=Galaxy.root+"api/libraries/datasets/download/"+b,f={ld_ids:c,folder_ids:d};this.processDownload(e,f,"get")},processDownload:function(a,b,d){if(a&&b){b="string"==typeof b?b:$.param(b);var e="";$.each(b.split("&"),function(){var a=this.split("=");e+=''}),$('
'+e+"
").appendTo("body").submit().remove(),c.info("Your download will begin soon.")}else c.error("An error occurred.")},addFilesFromHistoryModal:function(){this.histories=new d.GalaxyHistories;var a=this;this.histories.fetch().done(function(){a.modal=Galaxy.modal;var b=a.templateAddFilesFromHistory();a.modal.show({closing_events:!0,title:"Adding datasets from your history",body:b({histories:a.histories.models}),buttons:{Add:function(){a.addAllDatasetsFromHistory()},Close:function(){Galaxy.modal.hide()}},closing_callback:function(){Galaxy.libraries.library_router.navigate("folders/"+a.id,{trigger:!0})}}),a.fetchAndDisplayHistoryContents(a.histories.models[0].id),$("#dataset_add_bulk").change(function(b){a.fetchAndDisplayHistoryContents(b.target.value)})}).fail(function(a,b){c.error("undefined"!=typeof b.responseJSON?b.responseJSON.err_msg:"An error ocurred.")})},importFilesFromPathModal:function(){var a=this;this.modal=Galaxy.modal;var b=this.templateImportPathModal();this.modal.show({closing_events:!0,title:"Please enter paths to import",body:b({}),buttons:{Import:function(){a.importFromPathsClicked(a)},Close:function(){Galaxy.modal.hide()}},closing_callback:function(){Galaxy.libraries.library_router.navigate("folders/"+a.id,{trigger:!0})}}),this.renderSelectBoxes()},fetchExtAndGenomes:function(){var a=this;b.get({url:Galaxy.root+"api/datatypes?extension_only=False",success:function(b){a.list_extensions=[];for(var c in b)a.list_extensions.push({id:b[c].extension,text:b[c].extension,description:b[c].description,description_url:b[c].description_url});a.list_extensions.sort(function(a,b){return a.id>b.id?1:a.idb.id?1:a.id=0;k--){var l=i[k].trim();0!==l.length&&j.push(l)}this.initChainCallControl({length:j.length,action:"adding_datasets"}),this.chainCallImportingFolders({paths:j,preserve_dirs:a,link_data:b,space_to_tab:d,to_posix_lines:e,source:"admin_path",file_type:g,tag_using_filenames:f,dbkey:h})}else c.info("Please enter a path relative to Galaxy root.")},initChainCallControl:function(a){var b;switch(a.action){case"adding_datasets":b=this.templateAddingDatasetsProgressBar(),this.modal.$el.find(".modal-body").html(b({folder_name:this.options.folder_name}));break;case"deleting_datasets":b=this.templateDeletingItemsProgressBar(),this.modal.$el.find(".modal-body").html(b());break;case"to_history":b=this.templateImportIntoHistoryProgressBar(),this.modal.$el.find(".modal-body").html(b({history_name:a.history_name}));break;default:Galaxy.emit.error("Wrong action specified.","datalibs")}this.progress=0,this.progressStep=100/a.length,this.options.chain_call_control.total_number=a.length,this.options.chain_call_control.failed_number=0},importFromJstreePath:function(a,b){var d=$("#jstree_browser").jstree().get_selected(!0),e=_.filter(d,function(a){return 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All files you select will be imported into the current folder ignoring their folder structure.
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You can set extension type and genome for all imported datasets at once:

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"].join("")); +define(["layout/masthead","utils/utils","libs/toastr","mvc/library/library-model","mvc/ui/ui-select"],function(a,b,c,d,e){var f=Backbone.View.extend({el:"#center",events:{"click #toolbtn_create_folder":"createFolderFromModal","click #toolbtn_bulk_import":"modalBulkImport","click #include_deleted_datasets_chk":"checkIncludeDeleted","click #toolbtn_bulk_delete":"deleteSelectedItems","click .toolbtn-show-locinfo":"showLocInfo","click .page_size_prompt":"showPageSizePrompt"},defaults:{can_add_library_item:!1,contains_file_or_folder:!1,chain_call_control:{total_number:0,failed_number:0},disabled_jstree_element:"folders"},modal:null,jstree:null,histories:null,select_genome:null,select_extension:null,list_extensions:[],auto:{id:"auto",text:"Auto-detect",description:"This system will try to detect the file type automatically. 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Folder",body:c(),buttons:{Create:function(){b.create_new_folder_event()},Close:function(){Galaxy.modal.hide()}}})},create_new_folder_event:function(){var a=this.serialize_new_folder();if(this.validate_new_folder(a)){var b,e=new d.FolderAsModel,f=Backbone.history.fragment.split("/");b=f.indexOf("page")>-1?f[f.length-3]:f[f.length-1],e.url=e.urlRoot+b,e.save(a,{success:function(a){Galaxy.modal.hide(),c.success("Folder created."),a.set({type:"folder"}),Galaxy.libraries.folderListView.collection.add(a)},error:function(a,b){Galaxy.modal.hide(),c.error("undefined"!=typeof b.responseJSON?b.responseJSON.err_msg:"An error occurred.")}})}else c.error("Folder's name is missing.");return!1},serialize_new_folder:function(){return{name:$("input[name='Name']").val(),description:$("input[name='Description']").val()}},validate_new_folder:function(a){return""!==a.name},modalBulkImport:function(){var a=$("#folder_table").find(":checked");if(0===a.length)c.info("You must select some datasets first.");else{var b=this;this.histories=new d.GalaxyHistories,this.histories.fetch().done(function(){var a=b.templateBulkImportInModal();b.modal=Galaxy.modal,b.modal.show({closing_events:!0,title:"Import into History",body:a({histories:b.histories.models}),buttons:{Import:function(){b.importAllIntoHistory()},Close:function(){Galaxy.modal.hide()}}})}).fail(function(a,b){c.error("undefined"!=typeof b.responseJSON?b.responseJSON.err_msg:"An error occurred.")})}},importAllIntoHistory:function(){this.modal.disableButton("Import");var a=this.modal.$("input[name=history_name]").val(),b=this;if(""!==a)$.post(Galaxy.root+"api/histories",{name:a}).done(function(a){b.options.last_used_history_id=a.id,b.processImportToHistory(a.id,a.name)}).fail(function(){c.error("An error occurred.")}).always(function(){b.modal.enableButton("Import")});else{var d=$("select[name=dataset_import_bulk] option:selected").val();this.options.last_used_history_id=d;var e=$("select[name=dataset_import_bulk] 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'+e+"
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enter a path relative to Galaxy root.")},initChainCallControl:function(a){var b;switch(a.action){case"adding_datasets":b=this.templateAddingDatasetsProgressBar(),this.modal.$el.find(".modal-body").html(b({folder_name:this.options.folder_name}));break;case"deleting_datasets":b=this.templateDeletingItemsProgressBar(),this.modal.$el.find(".modal-body").html(b());break;case"to_history":b=this.templateImportIntoHistoryProgressBar(),this.modal.$el.find(".modal-body").html(b({history_name:a.history_name}));break;default:Galaxy.emit.error("Wrong action specified.","datalibs")}this.progress=0,this.progressStep=100/a.length,this.options.chain_call_control.total_number=a.length,this.options.chain_call_control.failed_number=0},importFromJstreePath:function(a,b){var d=$("#jstree_browser").jstree().get_selected(!0),e=_.filter(d,function(a){return 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','',"name","",'',"descriptionsynopsis
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","
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','A group of <%= group.get("members").length %> members with <%= group.get("repositories").length %> repositories and a total of <%= group.get("total_downloads") %> combined repository clones.

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","
"].join(""))}});return{GroupDetailView:c}}); //# sourceMappingURL=../../../maps/mvc/groups/group-detail-view.js.map \ No newline at end of file diff --git a/static/toolshed/scripts/mvc/groups/group-list-view.js b/static/toolshed/scripts/mvc/groups/group-list-view.js index 05311026e8d..49cd4072dfe 100644 --- a/static/toolshed/scripts/mvc/groups/group-list-view.js +++ b/static/toolshed/scripts/mvc/groups/group-list-view.js @@ -1,2 +1,2 @@ -define(["libs/toastr","toolshed/scripts/mvc/groups/group-model","toolshed/scripts/mvc/groups/group-listrow-view"],function(a,b,c){var d=Backbone.View.extend({el:"#groups_element",defaults:{},initialize:function(c){this.options=_.defaults(this.options||{},this.defaults,c);var d=this;window.globalTS.groups.collection=new b.Groups,window.globalTS.groups.collection.fetch({success:function(a){console.log("received data: "),console.log(a),d.render()},error:function(b,c){a.error("undefined"!=typeof c.responseJSON?c.responseJSON.err_msg:"An error ocurred.")}})},fetch:function(){},render:function(a){this.options=_.extend(this.options,a),$(".tooltip").hide();var b=this.templateGroupsList();this.$el.html(b({length:window.globalTS.groups.collection.models.length})),this.renderRows(window.globalTS.groups.collection.models),$("#center [data-toggle]").tooltip(),$("#center").css("overflow","auto")},renderRows:function(a){for(var b=0;b'),tmpl_array.push("
"),tmpl_array.push('
'),tmpl_array.push("<% if(length === 0) { %>"),tmpl_array.push("
There are no groups yet.
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NameMembersRepositories
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"),_.template(tmpl_array.join(""))}});return{GroupListView:d}}); +define(["libs/toastr","toolshed/scripts/mvc/groups/group-model","toolshed/scripts/mvc/groups/group-listrow-view"],function(a,b,c){var d=Backbone.View.extend({el:"#groups_element",defaults:{},initialize:function(c){this.options=_.defaults(this.options||{},this.defaults,c);var d=this;window.globalTS.groups.collection=new b.Groups,window.globalTS.groups.collection.fetch({success:function(a){console.log("received data: "),console.log(a),d.render()},error:function(b,c){a.error("undefined"!=typeof c.responseJSON?c.responseJSON.err_msg:"An error occurred.")}})},fetch:function(){},render:function(a){this.options=_.extend(this.options,a),$(".tooltip").hide();var b=this.templateGroupsList();this.$el.html(b({length:window.globalTS.groups.collection.models.length})),this.renderRows(window.globalTS.groups.collection.models),$("#center [data-toggle]").tooltip(),$("#center").css("overflow","auto")},renderRows:function(a){for(var b=0;b'),tmpl_array.push("
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