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Merging with dev
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anuprulez
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var jQuery=require("jquery"),$=jQuery,GalaxyApp=require("galaxy").GalaxyApp,QUERY_STRING=require("utils/query-string-parsing"),PANEL=require("layout/panel"),ToolPanel=require("./tool-panel"),HistoryPanel=require("./history-panel"),PAGE=require("layout/page"),ToolForm=require("mvc/tool/tool-form"),UserPreferences=require("mvc/user/user-preferences");Tours=require("mvc/tours"),window.app=function(a,b){window.Galaxy=new GalaxyApp(a,b),Galaxy.debug("analysis app");var c=a.config,d=new ToolPanel({el:"#left",userIsAnonymous:Galaxy.user.isAnonymous(),toolbox:c.toolbox,toolbox_in_panel:c.toolbox_in_panel,stored_workflow_menu_entries:c.stored_workflow_menu_entries,nginx_upload_path:c.nginx_upload_path,ftp_upload_site:c.ftp_upload_site,default_genome:c.default_genome,default_extension:c.default_extension}),e=new PANEL.CenterPanel({el:"#center"}),f=new HistoryPanel({el:"#right",galaxyRoot:Galaxy.root,userIsAnonymous:Galaxy.user.isAnonymous(),allow_user_dataset_purge:c.allow_user_dataset_purge}),g=new PAGE.PageLayoutView(_.extend(a,{el:"body",left:d,center:e,right:f}));Galaxy.page=g,Galaxy.params=Galaxy.config.params,Galaxy.toolPanel=d.tool_panel,Galaxy.upload=d.uploadButton,Galaxy.currHistoryPanel=f.historyView,Galaxy.currHistoryPanel.listenToGalaxy(Galaxy),Galaxy.app={display:function(a){$(".select2-hidden-accessible").remove(),e.display(a)}},Galaxy.router=new(Backbone.Router.extend({initialize:function(a){this.options=a},execute:function(a,b,c){Galaxy.debug("router execute:",a,b,c);var d=QUERY_STRING.parse(b.pop());b.push(d),a&&a.apply(this,b)},routes:{"(/)":"home","(/)root*":"home","(/)tours(/)(:tour_id)":"show_tours","(/)users(/)":"show_users"},show_tours:function(a){a?Tours.giveTour(a):e.display(new Tours.ToursView)},show_users:function(){e.display(new UserPreferences.View)},home:function(a){a.tool_id||a.job_id?"upload1"===a.tool_id?(Galaxy.upload.show(),this._loadCenterIframe("welcome")):this._loadToolForm(a):this._loadCenterIframe(a.workflow_id?"workflow/run?id="+a.workflow_id:a.m_c?a.m_c+"/"+a.m_a:"welcome")},_loadToolForm:function(a){a.id=a.tool_id,e.display(new ToolForm.View(a))},_loadCenterIframe:function(a,b){b=b||Galaxy.root,a=b+a,e.$("#galaxy_main").prop("src",a)}}))(a),$(function(){g.render(),g.right.historyView.loadCurrentHistory(),Galaxy.listenTo(g.right.historyView,"history-size-change",function(){Galaxy.user.fetch({url:Galaxy.user.urlRoot()+"/"+(Galaxy.user.id||"current")})}),g.right.historyView.connectToQuotaMeter(g.masthead.quotaMeter),Backbone.history.start({root:Galaxy.root,pushState:!0})})};
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//# sourceMappingURL=../maps/analysis.js.map
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define(["utils/utils","layout/masthead","mvc/ui/ui-modal","mvc/ui/ui-modal","mvc/user/user-quotameter"],function(a,b,c,d){return Backbone.View.extend({initialize:function(a){Galaxy.app=this,Galaxy.modal=new c.View,Galaxy.masthead=new b.View(a),this.setElement(this._template(a)),this.$el.append(Galaxy.masthead.$el),$("body").append(this.$el),this.render()},render:function(){require(["app/analysis"],function(a){window.console.log(a)},function(a){console.debug(a)})},initialize2:function(e){this.options=a.merge(e,{}),this.params=this.options.params,this.setElement(this._template(e)),Galaxy.app=this,$("body").append(this.$el);var f=$(this.$el.parent()).attr("scroll","no").addClass("full-content");this.options.message_box_visible&&(f.addClass("has-message-box"),this.$("#messagebox").show()),this.options.show_inactivity_warning&&(f.addClass("has-inactivity-box"),this.$("#inactivebox").show()),Galaxy.masthead||(Galaxy.masthead=new b.View(e),Galaxy.modal=new c.View,Galaxy.menu=new Menu.GalaxyMenu({masthead:Galaxy.masthead,config:e}),Galaxy.quotaMeter=new d.UserQuotaMeter({model:Galaxy.user,el:Galaxy.masthead.$(".quota-meter-container")}).render())},display:function(a,b){$(".select2-hidden-accessible").remove(),this.panels&&this.panels[b||"center"].display(a)},_buildPanels:function(b,c){this.panels=[];var d=["left","center","right"];for(var e in d){var f=d[e],g=this.panels[f]=new b[f](c);if("center"==f)this.$("#center").append(g.$el);else{var h=a.merge(g.components,{header:{title:"",cls:"",buttons:[]},body:{cls:""}}),i=$(this._templatePanel(f));i.find(".panel-header-text").html(h.header.title),i.find(".unified-panel-header-inner").addClass(h.header.cls);for(var e in h.header.buttons)i.find(".panel-header-buttons").append(h.header.buttons[e].$el);i.find(".unified-panel-body").addClass(h.body.cls).append(g.$el);{new Panel({center:this.$("#center"),panel:i,drag:i.find(".unified-panel-footer > .drag"),toggle:i.find(".unified-panel-footer > .panel-collapse"),right:"right"==f})}this.$el.append(i)}}},_templatePanel:function(a){return'<div id="'+a+'"><div class="unified-panel-header" unselectable="on"><div class="unified-panel-header-inner"><div class="panel-header-buttons" style="float: right"/><div class="panel-header-text"/></div></div><div class="unified-panel-body"/><div class="unified-panel-footer"><div class="panel-collapse '+a+'"/><div class="drag"/></div></div>'},_template:function(){return'<div id="everything" style="position: absolute; top: 0; left: 0; width: 100%; height: 100%;"><div id="background"/><div id="messagebox" class="panel-'+Galaxy.config.message_box_class+'-message" style="display: none;">'+Galaxy.config.message_box_content+'</div><div id="inactivebox" class="panel-warning-message" style="display: none;">'+Galaxy.config.inactivity_box_content+' <a href="'+Galaxy.root+'user/resend_verification">Resend verification.</a></div><div id="center" class="inbound"/></div>'}})});
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//# sourceMappingURL=../maps/app.js.map
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define([],function(){Backbone.View.extend({initialize:function(a){this.options=Utils.merge(a,{}),this.setElement(this._template());var b=this.options.params;this.$("#galaxy_main").prop("src",Galaxy.root+(b.tool_id&&"tool_runner?"+$.param(b)||b.workflow_id&&"workflow/run?id="+b.workflow_id||b.m_c&&b.m_c+"/"+b.m_a||Galaxy.config.require_login&&!Galaxy.user.id&&"user/login"||"root/welcome"));var c=this;this.$("#galaxy_main").on("load",function(){$(this).show(),c.$("#center-panel").empty().hide()})},display:function(a){this.$("#galaxy_main").hide(),this.$("#center-panel").empty().scrollTop(0).append(a).show()},_template:function(){return'<div style="position: absolute; width: 100%; height: 100%"><iframe name="galaxy_main" id="galaxy_main" frameborder="0" style="position: absolute; width: 100%; height: 100%;"/><div id="center-panel" style="position: absolute; width: 100%; height: 100%; padding: 10px; overflow: auto;"/></div>'}}),Backbone.View.extend({initialize:function(a){if(this.options=Utils.merge(a,{}),this.setElement(this._template()),Galaxy.user.id||!Galaxy.config.require_login){var b=new Tools.ToolSearch({spinner_url:a.spinner_url,search_url:a.search_url,hidden:!1}),c=new Tools.ToolCollection(a.toolbox),d=new Tools.ToolPanel({tool_search:b,tools:c,layout:a.toolbox_in_panel});tool_panel_view=new Tools.ToolPanelView({model:d}),Galaxy.toolPanel=d,d.get("layout").size()>0&&(tool_panel_view.render(),this.$(".toolMenu").show()),this.$el.prepend(tool_panel_view.$el),this.$("#internal-workflows").append(this._templateTool({title:"All workflows",href:"workflow/list_for_run"}));for(var e in a.stored_workflow_menu_entries){var f=a.stored_workflow_menu_entries[e];this.$("#internal-workflows").append(this._templateTool({title:f.stored_workflow.name,href:"workflow/run?id="+f.encoded_stored_workflow_id}))}this.$("a[minsizehint]").click(function(){parent.handle_minwidth_hint&&parent.handle_minwidth_hint($(this).attr("minsizehint"))}),Galaxy.upload=new Upload(a),this.components={header:{title:"Tools",buttons:[Galaxy.upload]}}}},_templateTool:function(a){return'<div class="toolTitle"><a href="'+Galaxy.root+a.href+'" target="galaxy_main">'+a.title+"</a></div>"},_template:function(){return'<div class="toolMenuContainer"><div class="toolMenu" style="display: none"><div id="search-no-results" style="display: none; padding-top: 5px"><em><strong>Search did not match any tools.</strong></em></div></div><div class="toolSectionPad"/><div class="toolSectionPad"/><div class="toolSectionTitle" id="title_XXinternalXXworkflow"><span>Workflows</span></div><div id="internal-workflows" class="toolSectionBody"><div class="toolSectionBg"/></div></div>'}}),Backbone.View.extend({initialize:function(a){this.options=Utils.merge(a,{}),this.setElement(this._template());var b=new Ui.ButtonLink({id:"history-refresh-button",title:"Refresh history",cls:"panel-header-button",icon:"fa fa-refresh",onclick:function(){top.Galaxy&&top.Galaxy.currHistoryPanel&&top.Galaxy.currHistoryPanel.loadCurrentHistory()}}),c=new Ui.ButtonLink({id:"history-options-button",title:"History options",cls:"panel-header-button",target:"galaxy_main",icon:"fa fa-cog",href:Galaxy.root+"root/history_options"}),d=new Ui.ButtonLink({id:"history-view-multi-button",title:"View all histories",cls:"panel-header-button",icon:"fa fa-columns",href:Galaxy.root+"history/view_multiple"});this.components={header:{title:"History",cls:"history-panel-header",buttons:[b,c,d]},body:{cls:"unified-panel-body-background"}},Galaxy.historyOptionsMenu=optionsMenu(c.$el,{anonymous:Galaxy.user.id&&"true"||"false",purgeAllowed:Galaxy.config.allow_user_dataset_purge&&"true"||"false",root:Galaxy.root}),Galaxy.currHistoryPanel=new HistoryPanel.CurrentHistoryPanel({el:this.$el,purgeAllowed:Galaxy.config.allow_user_dataset_purge,linkTarget:"galaxy_main",$scrollContainer:function(){return this.$el.parent()}}),Galaxy.currHistoryPanel.connectToQuotaMeter(Galaxy.quotaMeter),Galaxy.currHistoryPanel.listenToGalaxy(Galaxy),Galaxy.currHistoryPanel.loadCurrentHistory()},_template:function(){return'<div id="current-history-panel" class="history-panel"/>'}});return{left:Backbone.View.extend({initialize:function(){}})}});
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//# sourceMappingURL=../../maps/app/analysis.js.map
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define([],function(){return Backbone.View.extend({initialize:function(a,b){this.app=a,this.app_options=a.options||{},this.field=b&&b.field||new Backbone.View,this.model=b&&b.model||new Backbone.Model({text_enable:this.app_options.text_enable||"Enable",text_disable:this.app_options.text_disable||"Disable",cls_enable:this.app_options.cls_enable||"fa fa-caret-square-o-down",cls_disable:this.app_options.cls_disable||"fa fa-caret-square-o-up"}).set(b),this.setElement(this._template()),this.$field=this.$(".ui-form-field"),this.$info=this.$(".ui-form-info"),this.$preview=this.$(".ui-form-preview"),this.$collapsible=this.$(".ui-form-collapsible"),this.$collapsible_text=this.$(".ui-form-collapsible-text"),this.$collapsible_icon=this.$(".ui-form-collapsible-icon"),this.$title=this.$(".ui-form-title"),this.$title_text=this.$(".ui-form-title-text"),this.$error_text=this.$(".ui-form-error-text"),this.$error=this.$(".ui-form-error"),this.$backdrop=this.$(".ui-form-backdrop"),this.$field.prepend(this.field.$el);var c=this.model.get("collapsible_value");this.field.collapsed=void 0!==c&&JSON.stringify(this.model.get("value"))==JSON.stringify(c),this.listenTo(this.model,"change",this.render,this),this.render();var d=this;this.$collapsible.on("click",function(){d.field.collapsed=!d.field.collapsed,a.trigger&&a.trigger("change"),d.render()})},backdrop:function(){this.model.set("backdrop",!0)},error:function(a){this.model.set("error_text",a)},reset:function(){this.model.set("error_text",null)},render:function(){$(".tooltip").hide();var a=this.model.get("help",""),b=this.model.get("argument");b&&-1==a.indexOf("("+b+")")&&(a+=" ("+b+")"),this.$info.html(a),this.$el[this.model.get("hidden")?"hide":"show"](),this.$preview[this.field.collapsed&&this.model.get("collapsible_preview")||this.model.get("disabled")?"show":"hide"]().html(_.escape(this.model.get("text_value")));var c=this.model.get("error_text");if(this.$error[c?"show":"hide"](),this.$el[c?"addClass":"removeClass"]("ui-error"),this.$error_text.html(c),this.$backdrop[this.model.get("backdrop")?"show":"hide"](),this.field.collapsed||this.model.get("disabled")?this.$field.hide():this.$field.show(),this.field.model&&this.field.model.set({color:this.model.get("color"),style:this.model.get("style")}),this.model.get("disabled")||void 0===this.model.get("collapsible_value"))this.$title_text.show().text(this.model.get("label")),this.$collapsible.hide();else{var d=this.field.collapsed?"enable":"disable";this.$title_text.hide(),this.$collapsible.show(),this.$collapsible_text.text(this.model.get("label")),this.$collapsible_icon.removeClass().addClass("icon").addClass(this.model.get("cls_"+d)).attr("data-original-title",this.model.get("text_"+d)).tooltip({placement:"bottom"})}},_template:function(){return $("<div/>").addClass("ui-form-element").append($("<div/>").addClass("ui-form-error ui-error").append($("<span/>").addClass("fa fa-arrow-down")).append($("<span/>").addClass("ui-form-error-text"))).append($("<div/>").addClass("ui-form-title").append($("<div/>").addClass("ui-form-collapsible").append($("<i/>").addClass("ui-form-collapsible-icon")).append($("<span/>").addClass("ui-form-collapsible-text"))).append($("<span/>").addClass("ui-form-title-text"))).append($("<div/>").addClass("ui-form-field").append($("<span/>").addClass("ui-form-info")).append($("<div/>").addClass("ui-form-backdrop"))).append($("<div/>").addClass("ui-form-preview"))}})});
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define([],function(){return Backbone.View.extend({initialize:function(a,b){this.app=a,this.app_options=a.model?a.model.attributes:{},this.field=b&&b.field||new Backbone.View,this.model=b&&b.model||new Backbone.Model({text_enable:this.app_options.text_enable||"Enable",text_disable:this.app_options.text_disable||"Disable",cls_enable:this.app_options.cls_enable||"fa fa-caret-square-o-down",cls_disable:this.app_options.cls_disable||"fa fa-caret-square-o-up"}).set(b),this.setElement(this._template()),this.$field=this.$(".ui-form-field"),this.$info=this.$(".ui-form-info"),this.$preview=this.$(".ui-form-preview"),this.$collapsible=this.$(".ui-form-collapsible"),this.$collapsible_text=this.$(".ui-form-collapsible-text"),this.$collapsible_icon=this.$(".ui-form-collapsible-icon"),this.$title=this.$(".ui-form-title"),this.$title_text=this.$(".ui-form-title-text"),this.$error_text=this.$(".ui-form-error-text"),this.$error=this.$(".ui-form-error"),this.$backdrop=this.$(".ui-form-backdrop"),this.$field.prepend(this.field.$el);var c=this.model.get("collapsible_value");this.field.collapsed=void 0!==c&&JSON.stringify(this.model.get("value"))==JSON.stringify(c),this.listenTo(this.model,"change",this.render,this),this.render();var d=this;this.$collapsible.on("click",function(){d.field.collapsed=!d.field.collapsed,a.trigger&&a.trigger("change"),d.render()})},backdrop:function(){this.model.set("backdrop",!0)},error:function(a){this.model.set("error_text",a)},reset:function(){!this.model.get("fixed")&&this.model.set("error_text",null)},render:function(){$(".tooltip").hide();var a=this.model.get("help",""),b=this.model.get("argument");b&&-1==a.indexOf("("+b+")")&&(a+=" ("+b+")"),this.$info.html(a),this.$el[this.model.get("hidden")?"hide":"show"](),this.$preview[this.field.collapsed&&this.model.get("collapsible_preview")||this.model.get("disabled")?"show":"hide"]().html(_.escape(this.model.get("text_value")));var c=this.model.get("error_text");if(this.$error[c?"show":"hide"](),this.$el[c?"addClass":"removeClass"]("ui-error"),this.$error_text.html(c),this.$backdrop[this.model.get("backdrop")?"show":"hide"](),this.field.collapsed||this.model.get("disabled")?this.$field.hide():this.$field.show(),this.field.model&&this.field.model.set({color:this.model.get("color"),style:this.model.get("style")}),this.model.get("disabled")||void 0===this.model.get("collapsible_value"))this.$title_text.show().text(this.model.get("label")),this.$collapsible.hide();else{var d=this.field.collapsed?"enable":"disable";this.$title_text.hide(),this.$collapsible.show(),this.$collapsible_text.text(this.model.get("label")),this.$collapsible_icon.removeClass().addClass("icon").addClass(this.model.get("cls_"+d)).attr("data-original-title",this.model.get("text_"+d)).tooltip({placement:"bottom"})}},_template:function(){return $("<div/>").addClass("ui-form-element").append($("<div/>").addClass("ui-form-error ui-error").append($("<span/>").addClass("fa fa-arrow-down")).append($("<span/>").addClass("ui-form-error-text"))).append($("<div/>").addClass("ui-form-title").append($("<div/>").addClass("ui-form-collapsible").append($("<i/>").addClass("ui-form-collapsible-icon")).append($("<span/>").addClass("ui-form-collapsible-text"))).append($("<span/>").addClass("ui-form-title-text"))).append($("<div/>").addClass("ui-form-field").append($("<span/>").addClass("ui-form-info")).append($("<div/>").addClass("ui-form-backdrop"))).append($("<div/>").addClass("ui-form-preview"))}})});
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//# sourceMappingURL=../../../maps/mvc/form/form-input.js.map
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define(["utils/utils","mvc/ui/ui-misc","mvc/ui/ui-select-content","mvc/ui/ui-select-library","mvc/ui/ui-select-ftp","mvc/ui/ui-color-picker"],function(a,b,c,d,e,f){return Backbone.Model.extend({types:{text:"_fieldText",password:"_fieldText",select:"_fieldSelect",data_column:"_fieldSelect",genomebuild:"_fieldSelect",data:"_fieldData",data_collection:"_fieldData",integer:"_fieldSlider","float":"_fieldSlider","boolean":"_fieldBoolean",drill_down:"_fieldDrilldown",color:"_fieldColor",hidden:"_fieldHidden",hidden_data:"_fieldHidden",baseurl:"_fieldHidden",library_data:"_fieldLibrary",ftpfile:"_fieldFtp"},create:function(a){var b=this.types[a.type],c="function"==typeof this[b]?this[b].call(this,a):null;return c||(c=a.options?this._fieldSelect(a):this._fieldText(a),Galaxy.emit.debug("form-parameters::_addRow()","Auto matched field type ("+a.type+").")),void 0===a.value&&(a.value=null),c.value(a.value),c},_fieldData:function(a){return new c.View({id:"field-"+a.id,extensions:a.extensions,optional:a.optional,multiple:a.multiple,type:a.type,flavor:a.flavor,data:a.options,onchange:a.onchange})},_fieldSelect:function(a){if(a.is_workflow)return this._fieldText(a);"data_column"==a.type&&(a.error_text="Missing columns in referenced dataset.");var c=a.data;c||(c=[],_.each(a.options,function(a){c.push({label:a[0],value:a[1]})}));var d=b.Select;switch(a.display){case"checkboxes":d=b.Checkbox;break;case"radio":d=b.Radio;break;case"radiobutton":d=b.RadioButton}return new d.View({id:"field-"+a.id,data:c,error_text:a.error_text||"No options available",multiple:a.multiple,optional:a.optional,onchange:a.onchange,searchable:"workflow"!==a.flavor})},_fieldDrilldown:function(a){return a.is_workflow?this._fieldText(a):new b.Drilldown.View({id:"field-"+a.id,data:a.options,display:a.display,optional:a.optional,onchange:a.onchange})},_fieldText:function(c){if(c.options&&c.data)if(c.area=c.multiple,a.isEmpty(c.value))c.value=null;else if($.isArray(c.value)){var d="";for(var e in c.value){if(d+=String(c.value[e]),!c.multiple)break;d+="\n"}c.value=d}return new b.Input({id:"field-"+c.id,type:c.type,area:c.area,readonly:c.readonly,placeholder:c.placeholder,onchange:c.onchange})},_fieldSlider:function(a){return new b.Slider.View({id:"field-"+a.id,precise:"float"==a.type,is_workflow:a.is_workflow,min:a.min,max:a.max,onchange:a.onchange})},_fieldHidden:function(a){return new b.Hidden({id:"field-"+a.id,info:a.info})},_fieldBoolean:function(a){return new b.RadioButton.View({id:"field-"+a.id,data:[{label:"Yes",value:"true"},{label:"No",value:"false"}],onchange:a.onchange})},_fieldColor:function(a){return new f({id:"field-"+a.id,onchange:a.onchange})},_fieldLibrary:function(a){return new d.View({id:"field-"+a.id,optional:a.optional,multiple:a.multiple,onchange:a.onchange})},_fieldFtp:function(a){return new e.View({id:"field-"+a.id,optional:a.optional,multiple:a.multiple,onchange:a.onchange})}})});
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define(["utils/utils","mvc/ui/ui-misc","mvc/ui/ui-select-content","mvc/ui/ui-select-library","mvc/ui/ui-select-ftp","mvc/ui/ui-color-picker"],function(a,b,c,d,e,f){return Backbone.Model.extend({types:{text:"_fieldText",password:"_fieldText",select:"_fieldSelect",data_column:"_fieldSelect",genomebuild:"_fieldSelect",data:"_fieldData",data_collection:"_fieldData",integer:"_fieldSlider","float":"_fieldSlider","boolean":"_fieldBoolean",drill_down:"_fieldDrilldown",color:"_fieldColor",hidden:"_fieldHidden",hidden_data:"_fieldHidden",baseurl:"_fieldHidden",library_data:"_fieldLibrary",ftpfile:"_fieldFtp"},create:function(a){var b=this.types[a.type],c="function"==typeof this[b]?this[b].call(this,a):null;return c||(c=a.options?this._fieldSelect(a):this._fieldText(a),Galaxy.emit.debug("form-parameters::_addRow()","Auto matched field type ("+a.type+").")),void 0===a.value&&(a.value=null),c.value(a.value),c},_fieldData:function(a){return new c.View({id:"field-"+a.id,extensions:a.extensions,optional:a.optional,multiple:a.multiple,type:a.type,flavor:a.flavor,data:a.options,onchange:a.onchange})},_fieldSelect:function(a){if(a.is_workflow)return this._fieldText(a);"data_column"==a.type&&(a.error_text="Missing columns in referenced dataset.");var c=a.data;c||(c=[],_.each(a.options,function(a){c.push({label:a[0],value:a[1]})}));var d=b.Select;switch(a.display){case"checkboxes":d=b.Checkbox;break;case"radio":d=b.Radio;break;case"radiobutton":d=b.RadioButton}return new d.View({id:"field-"+a.id,data:c,error_text:a.error_text||"No options available",multiple:a.multiple,optional:a.optional,onchange:a.onchange,searchable:"workflow"!==a.flavor})},_fieldDrilldown:function(a){return a.is_workflow?this._fieldText(a):new b.Drilldown.View({id:"field-"+a.id,data:a.options,display:a.display,optional:a.optional,onchange:a.onchange})},_fieldText:function(c){if(c.options&&c.data)if(c.area=c.multiple,a.isEmpty(c.value))c.value=null;else if($.isArray(c.value)){var d="";for(var e in c.value){if(d+=String(c.value[e]),!c.multiple)break;d+="\n"}c.value=d}return new b.Input({id:"field-"+c.id,type:c.type,area:c.area,readonly:c.readonly,placeholder:c.placeholder,datalist:c.datalist,onchange:c.onchange})},_fieldSlider:function(a){return new b.Slider.View({id:"field-"+a.id,precise:"float"==a.type,is_workflow:a.is_workflow,min:a.min,max:a.max,onchange:a.onchange})},_fieldHidden:function(a){return new b.Hidden({id:"field-"+a.id,info:a.info})},_fieldBoolean:function(a){return new b.RadioButton.View({id:"field-"+a.id,data:[{label:"Yes",value:"true"},{label:"No",value:"false"}],onchange:a.onchange})},_fieldColor:function(a){return new f({id:"field-"+a.id,onchange:a.onchange})},_fieldLibrary:function(a){return new d.View({id:"field-"+a.id,optional:a.optional,multiple:a.multiple,onchange:a.onchange})},_fieldFtp:function(a){return new e.View({id:"field-"+a.id,optional:a.optional,multiple:a.multiple,onchange:a.onchange})}})});
|
||||
//# sourceMappingURL=../../../maps/mvc/form/form-parameters.js.map
|
||||
@@ -1,2 +1,2 @@
|
||||
define(["utils/utils","mvc/ui/ui-misc","mvc/ui/ui-portlet","mvc/form/form-repeat","mvc/form/form-input","mvc/form/form-parameters"],function(a,b,c,d,e,f){var g=Backbone.View.extend({initialize:function(a,b){this.app=a,this.inputs=b.inputs,this.parameters=new f,this.setElement($("<div/>")),this.render()},render:function(){var a=this;this.$el.empty(),_.each(this.inputs,function(b){a.add(b)})},add:function(b){var c=jQuery.extend(!0,{},b);switch(c.id=b.id=a.uid(),this.app.input_list[c.id]=c,c.type){case"conditional":this._addConditional(c);break;case"repeat":this._addRepeat(c);break;case"section":this._addSection(c);break;default:this._addRow(c)}},_addConditional:function(a){var b=this;a.test_param.id=a.id,this.app.options.sustain_conditionals&&(a.test_param.disabled=!0);var c=this._addRow(a.test_param);c.model&&c.model.set("onchange",function(c){var d=b.app.data.matchCase(a,c);for(var e in a.cases){var f=a.cases[e],g=b.$("#"+a.id+"-section-"+e),h=!1;for(var i in f.inputs)if(!f.inputs[i].hidden){h=!0;break}e==d&&h?g.fadeIn("fast"):g.hide()}b.app.trigger("change")});for(var d in a.cases){var e=new g(this.app,{inputs:a.cases[d].inputs});this._append(e.$el.addClass("ui-form-section"),a.id+"-section-"+d)}c.trigger("change")},_addRepeat:function(a){function b(b){var d=a.id+"-section-"+f++,e=new g(c.app,{inputs:b});h.add({id:d,$el:e.$el,ondel:function(){h.del(d),c.app.trigger("change")}})}for(var c=this,f=0,h=new d.View({title:a.title||"Repeat",min:a.min,max:a.max,onnew:function(){b(a.inputs),c.app.trigger("change")}}),i=_.size(a.cache),j=0;j<Math.max(Math.max(i,a.min||0),a.default||0);j++)b(i>j?a.cache[j]:a.inputs);this.app.options.sustain_repeats&&h.hideOptions();var k=new e(this.app,{label:a.title||a.name,help:a.help,field:h});this._append(k.$el,a.id)},_addSection:function(a){var b=new c.View({title:a.title||a.name,cls:"ui-portlet-section",collapsible:!0,collapsible_button:!0,collapsed:!a.expanded});b.append(new g(this.app,{inputs:a.inputs}).$el),b.append($("<div/>").addClass("ui-form-info").html(a.help)),this.app.on("expand",function(a){b.$("#"+a).length>0&&b.expand()}),this._append(b.$el,a.id)},_addRow:function(a){var b=this,c=a.id;a.onchange=a.onchange||function(){b.app.trigger("change",c)};var d=this.parameters.create(a);this.app.field_list[c]=d;var f=new e(this.app,{name:a.name,label:a.hide_label?"":a.label||a.name,value:a.value,text_value:a.text_value,collapsible_value:a.collapsible_value,collapsible_preview:a.collapsible_preview,help:a.help,argument:a.argument,disabled:a.disabled,color:a.color,style:a.style,backdrop:a.backdrop,hidden:a.hidden,field:d});return this.app.element_list[c]=f,this._append(f.$el,a.id),d},_append:function(a,b){this.$el.append(a.addClass("section-row").attr("id",b))}});return{View:g}});
|
||||
define(["utils/utils","mvc/ui/ui-misc","mvc/ui/ui-portlet","mvc/form/form-repeat","mvc/form/form-input","mvc/form/form-parameters"],function(a,b,c,d,e,f){var g=Backbone.View.extend({initialize:function(a,b){this.app=a,this.inputs=b.inputs,this.parameters=new f,this.setElement($("<div/>")),this.render()},render:function(){var a=this;this.$el.empty(),_.each(this.inputs,function(b){a.add(b)})},add:function(b){var c=jQuery.extend(!0,{},b);switch(c.id=b.id=a.uid(),this.app.input_list[c.id]=c,c.type){case"conditional":this._addConditional(c);break;case"repeat":this._addRepeat(c);break;case"section":this._addSection(c);break;default:this._addRow(c)}},_addConditional:function(a){var b=this;a.test_param.id=a.id,this.app.model.get("sustain_conditionals")&&(a.test_param.disabled=!0);var c=this._addRow(a.test_param);c.model&&c.model.set("onchange",function(c){var d=b.app.data.matchCase(a,c);for(var e in a.cases){var f=a.cases[e],g=b.$("#"+a.id+"-section-"+e),h=!1;for(var i in f.inputs)if(!f.inputs[i].hidden){h=!0;break}e==d&&h?g.fadeIn("fast"):g.hide()}b.app.trigger("change")});for(var d in a.cases){var e=new g(this.app,{inputs:a.cases[d].inputs});this._append(e.$el.addClass("ui-form-section"),a.id+"-section-"+d)}c.trigger("change")},_addRepeat:function(a){function b(b){var d=a.id+"-section-"+f++,e=new g(c.app,{inputs:b});h.add({id:d,$el:e.$el,ondel:function(){h.del(d),c.app.trigger("change")}})}for(var c=this,f=0,h=new d.View({title:a.title||"Repeat",min:a.min,max:a.max,onnew:function(){b(a.inputs),c.app.trigger("change")}}),i=_.size(a.cache),j=0;j<Math.max(Math.max(i,a.min||0),a.default||0);j++)b(i>j?a.cache[j]:a.inputs);this.app.model.get("sustain_repeats")&&h.hideOptions();var k=new e(this.app,{label:a.title||a.name,help:a.help,field:h});this._append(k.$el,a.id)},_addSection:function(a){var b=new c.View({title:a.title||a.name,cls:"ui-portlet-section",collapsible:!0,collapsible_button:!0,collapsed:!a.expanded});b.append(new g(this.app,{inputs:a.inputs}).$el),b.append($("<div/>").addClass("ui-form-info").html(a.help)),this.app.on("expand",function(a){b.$("#"+a).length>0&&b.expand()}),this._append(b.$el,a.id)},_addRow:function(a){var b=this,c=a.id;a.onchange=a.onchange||function(){b.app.trigger("change",c)};var d=this.parameters.create(a);this.app.field_list[c]=d;var f=new e(this.app,{name:a.name,label:a.hide_label?"":a.label||a.name,value:a.value,text_value:a.text_value,collapsible_value:a.collapsible_value,collapsible_preview:a.collapsible_preview,help:a.help,argument:a.argument,disabled:a.disabled,color:a.color,style:a.style,backdrop:a.backdrop,hidden:a.hidden,fixed:a.fixed,field:d});return this.app.element_list[c]=f,this._append(f.$el,a.id),d},_append:function(a,b){this.$el.append(a.addClass("section-row").attr("id",b))}});return{View:g}});
|
||||
//# sourceMappingURL=../../../maps/mvc/form/form-section.js.map
|
||||
@@ -1,2 +1,2 @@
|
||||
define(["utils/utils","mvc/ui/ui-portlet","mvc/ui/ui-misc","mvc/form/form-section","mvc/form/form-data"],function(a,b,c,d,e){return Backbone.View.extend({initialize:function(b){this.options=a.merge(b,{initial_errors:!1,cls:"ui-portlet-limited",icon:null,always_refresh:!0}),this.setElement("<div/>"),this.render()},update:function(a){var b=this;this.data.matchModel(a,function(a,c){var d=b.input_list[c];if(d&&d.options&&!_.isEqual(d.options,a.options)){d.options=a.options;var e=b.field_list[c];if(e.update){var f=[];if(-1!=["data","data_collection","drill_down"].indexOf(d.type))f=d.options;else for(var g in a.options){var h=a.options[g];h.length>2&&f.push({label:h[0],value:h[1]})}e.update(f),e.trigger("change"),Galaxy.emit.debug("form-view::update()","Updating options for "+c)}}})},wait:function(a){for(var b in this.input_list){var c=this.field_list[b],d=this.input_list[b];d.is_dynamic&&c.wait&&c.unwait&&c[a?"wait":"unwait"]()}},highlight:function(a,b,c){var d=this.element_list[a];if(d&&(d.error(b||"Please verify this parameter."),this.portlet.expand(),this.trigger("expand",a),!c)){var e=this.$el.parents().filter(function(){return-1!=["auto","scroll"].indexOf($(this).css("overflow"))}).first();e.animate({scrollTop:e.scrollTop()+d.$el.offset().top-120},500)}},errors:function(a){if(this.trigger("reset"),a&&a.errors){var b=this.data.matchResponse(a.errors);for(var c in this.element_list){{this.element_list[c]}b[c]&&this.highlight(c,b[c],!0)}}},render:function(){var a=this;this.off("change"),this.off("reset"),this.field_list={},this.input_list={},this.element_list={},this.data=new e.Manager(this),this._renderForm(),this.data.create(),this.options.initial_errors&&this.errors(this.options);var b=this.data.checksum();return this.on("change",function(c){var d=a.input_list[c];if(!d||d.refresh_on_change||a.options.always_refresh){var e=a.data.checksum();e!=b&&(b=e,a.options.onchange&&a.options.onchange())}}),this.on("reset",function(){_.each(a.element_list,function(a){a.reset()})}),this},_renderForm:function(){$(".tooltip").remove(),this.message=new c.UnescapedMessage,this.section=new d.View(this,{inputs:this.options.inputs}),this.portlet=new b.View({icon:this.options.icon,title:this.options.title,cls:this.options.cls,operations:this.options.operations,buttons:this.options.buttons,collapsible:this.options.collapsible,collapsed:this.options.collapsed}),this.portlet.append(this.message.$el),this.portlet.append(this.section.$el),this.$el.empty(),this.options.inputs&&this.$el.append(this.portlet.$el),this.options.message&&this.message.update({persistent:!0,status:"warning",message:this.options.message}),Galaxy.emit.debug("form-view::initialize()","Completed")}})});
|
||||
define(["utils/utils","mvc/ui/ui-portlet","mvc/ui/ui-misc","mvc/form/form-section","mvc/form/form-data"],function(a,b,c,d,e){return Backbone.View.extend({initialize:function(a){this.model=new Backbone.Model({initial_errors:!1,cls:"ui-portlet-limited",icon:null,always_refresh:!0,message_status:"warning"}).set(a),this.setElement("<div/>"),this.render()},update:function(a){var b=this;this.data.matchModel(a,function(a,c){var d=b.input_list[c];if(d&&d.options&&!_.isEqual(d.options,a.options)){d.options=a.options;var e=b.field_list[c];if(e.update){var f=[];if(-1!=["data","data_collection","drill_down"].indexOf(d.type))f=d.options;else for(var g in a.options){var h=a.options[g];h.length>2&&f.push({label:h[0],value:h[1]})}e.update(f),e.trigger("change"),Galaxy.emit.debug("form-view::update()","Updating options for "+c)}}})},wait:function(a){for(var b in this.input_list){var c=this.field_list[b],d=this.input_list[b];d.is_dynamic&&c.wait&&c.unwait&&c[a?"wait":"unwait"]()}},highlight:function(a,b,c){var d=this.element_list[a];if(d&&(d.error(b||"Please verify this parameter."),this.portlet.expand(),this.trigger("expand",a),!c)){var e=this.$el.parents().filter(function(){return-1!=["auto","scroll"].indexOf($(this).css("overflow"))}).first();e.animate({scrollTop:e.scrollTop()+d.$el.offset().top-120},500)}},errors:function(a){if(this.trigger("reset"),a&&a.errors){var b=this.data.matchResponse(a.errors);for(var c in this.element_list){{this.element_list[c]}b[c]&&this.highlight(c,b[c],!0)}}},render:function(){var a=this;this.off("change"),this.off("reset"),this.field_list={},this.input_list={},this.element_list={},this.data=new e.Manager(this),this._renderForm(),this.data.create(),this.model.get("initial_errors")&&this.errors(this.model.attributes);var b=this.data.checksum();return this.on("change",function(c){var d=a.input_list[c];if(!d||d.refresh_on_change||a.model.get("always_refresh")){var e=a.data.checksum();e!=b&&(b=e,a.model.get("onchange")&&a.model.get("onchange")())}}),this.on("reset",function(){_.each(a.element_list,function(a){a.reset()})}),this},_renderForm:function(){$(".tooltip").remove();var a=this.model.attributes;this.message=new c.UnescapedMessage,this.section=new d.View(this,{inputs:a.inputs}),this.portlet=new b.View({icon:a.icon,title:a.title,cls:a.cls,operations:a.operations,buttons:a.buttons,collapsible:a.collapsible,collapsed:a.collapsed,onchange_title:a.onchange_title}),this.portlet.append(this.message.$el),this.portlet.append(this.section.$el),this.$el.empty(),a.inputs&&this.$el.append(this.portlet.$el),a.message&&this.message.update({persistent:!0,status:a.message_status,message:a.message}),Galaxy.emit.debug("form-view::initialize()","Completed")}})});
|
||||
//# sourceMappingURL=../../../maps/mvc/form/form-view.js.map
|
||||
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@@ -1,2 +1,2 @@
|
||||
define(["mvc/dataset/dataset-li","mvc/base-mvc","utils/localization"],function(a,b,c){"use strict";var d=a.DatasetListItemView,e=d.extend({className:d.prototype.className+" history-content",initialize:function(a,b){d.prototype.initialize.call(this,a,b)},toString:function(){var a=this.model?this.model+"":"(no model)";return"HDAListItemView("+a+")"}});return e.prototype.templates=function(){var a=b.wrapTemplate(['<div class="title-bar clear" tabindex="0">','<span class="state-icon"></span>','<div class="title">','<span class="hid"><%- dataset.hid %></span> ','<span class="name"><%- dataset.name %></span>',"</div>","</div>"],"dataset"),e=_.extend({},d.prototype.templates.warnings,{hidden:b.wrapTemplate(["<% if( !dataset.visible ){ %>",'<div class="hidden-msg warningmessagesmall">',c("This dataset has been hidden"),"</div>","<% } %>"],"dataset")});return _.extend({},d.prototype.templates,{titleBar:a,warnings:e})}(),{HDAListItemView:e}});
|
||||
define(["mvc/dataset/dataset-li","mvc/base-mvc","utils/localization"],function(a,b,c){"use strict";var d=a.DatasetListItemView,e=d.extend({className:d.prototype.className+" history-content",initialize:function(a,b){d.prototype.initialize.call(this,a,b)},toString:function(){var a=this.model?this.model+"":"(no model)";return"HDAListItemView("+a+")"}});return e.prototype.templates=function(){var a=b.wrapTemplate(['<div class="title-bar clear" tabindex="0">','<span class="state-icon"></span>','<div class="title">','<span class="hid"><%- dataset.hid %></span> ','<span class="name"><%- dataset.name %></span>',"</div>","</br>",'<span class="nametags">',"<% _.each(dataset.nametags, function(tag){ %>",'<span class="label label-info"><%- tag %></span>',"<% }); %>","</span>","</div>"],"dataset"),e=_.extend({},d.prototype.templates.warnings,{hidden:b.wrapTemplate(["<% if( !dataset.visible ){ %>",'<div class="hidden-msg warningmessagesmall">',c("This dataset has been hidden"),"</div>","<% } %>"],"dataset")});return _.extend({},d.prototype.templates,{titleBar:a,warnings:e})}(),{HDAListItemView:e}});
|
||||
//# sourceMappingURL=../../../maps/mvc/history/hda-li.js.map
|
||||
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File diff suppressed because one or more lines are too long
@@ -1,2 +1,2 @@
|
||||
define(["mvc/ui/popup-menu","mvc/history/copy-dialog","mvc/base-mvc","utils/localization","mvc/webhooks"],function(a,b,c,d,e){"use strict";function f(a,b,c){return _.clone(g).filter(function(d){return a&&!d.anon?!1:!b&&d.purge?!1:(d.href&&(d.href=c+d.href,d.target="galaxy_main"),d.confirm&&(d.func=function(){confirm(d.confirm)&&(galaxy_main.location=d.href)}),!0)})}var g=[{html:d("History Lists"),header:!0},{html:d("Saved Histories"),href:"history/list"},{html:d("Histories Shared with Me"),href:"history/list_shared"},{html:d("Current History"),header:!0,anon:!0},{html:d("Create New"),func:function(){Galaxy&&Galaxy.currHistoryPanel&&Galaxy.currHistoryPanel.createNewHistory()}},{html:d("Copy History"),func:function(){b(Galaxy.currHistoryPanel.model).done(function(){Galaxy.currHistoryPanel.loadCurrentHistory()})}},{html:d("Share or Publish"),href:"history/sharing"},{html:d("Show Structure"),href:"history/display_structured",anon:!0},{html:d("Extract Workflow"),href:"workflow/build_from_current_history"},{html:d("Delete"),anon:!0,func:function(){Galaxy&&Galaxy.currHistoryPanel&&confirm(d("Really delete the current history?"))&&(galaxy_main.window.location.href="history/delete?id="+Galaxy.currHistoryPanel.model.id)}},{html:d("Delete Permanently"),purge:!0,anon:!0,func:function(){Galaxy&&Galaxy.currHistoryPanel&&confirm(d("Really delete the current history permanently? This cannot be undone."))&&(galaxy_main.window.location.href="history/delete?purge=True&id="+Galaxy.currHistoryPanel.model.id)}},{html:d("Dataset Actions"),header:!0,anon:!0},{html:d("Copy Datasets"),href:"dataset/copy_datasets"},{html:d("Dataset Security"),href:"root/history_set_default_permissions"},{html:d("Resume Paused Jobs"),href:"history/resume_paused_jobs?current=True",anon:!0},{html:d("Collapse Expanded Datasets"),func:function(){Galaxy&&Galaxy.currHistoryPanel&&Galaxy.currHistoryPanel.collapseAll()}},{html:d("Unhide Hidden Datasets"),anon:!0,func:function(){if(Galaxy&&Galaxy.currHistoryPanel&&confirm(d("Really unhide all hidden datasets?"))){var a=Galaxy.currHistoryPanel.model.contents.hidden();a.ajaxQueue(Backbone.Model.prototype.save,{visible:!0}).done(function(){Galaxy.currHistoryPanel.renderItems()}).fail(function(){alert("There was an error unhiding the datasets"),console.error(arguments)})}}},{html:d("Delete Hidden Datasets"),anon:!0,func:function(){if(Galaxy&&Galaxy.currHistoryPanel&&confirm(d("Really delete all hidden datasets?"))){var a=Galaxy.currHistoryPanel.model.contents.hidden();a.ajaxQueue(Backbone.Model.prototype.save,{deleted:!0,visible:!0}).done(function(){Galaxy.currHistoryPanel.renderItems()}).fail(function(){alert("There was an error deleting the datasets"),console.error(arguments)})}}},{html:d("Purge Deleted Datasets"),confirm:d("Really delete all deleted datasets permanently? This cannot be undone."),href:"history/purge_deleted_datasets",purge:!0,anon:!0},{html:d("Downloads"),header:!0},{html:d("Export Tool Citations"),href:"history/citations",anon:!0},{html:d("Export History to File"),href:"history/export_archive?preview=True",anon:!0},{html:d("Other Actions"),header:!0},{html:d("Import from File"),href:"history/import_archive"}];e.add({url:"api/webhooks/history-menu/all",async:!1,callback:function(a){var b=[];$.each(a.models,function(a,c){var e=c.toJSON();e.activate&&b.push({html:d(e.config.title),anon:!0})}),b.length>0&&(b.unshift({html:d("Webhooks"),header:!0}),$.merge(g,b))}});var h=function(b,c){c=c||{};var d=void 0===c.anonymous?!0:c.anonymous,e=c.purgeAllowed||!1,g=f(d,e,Galaxy.root);return new a(b,g)};return h});
|
||||
define(["mvc/ui/popup-menu","mvc/history/copy-dialog","mvc/base-mvc","utils/localization","mvc/webhooks"],function(a,b,c,d,e){"use strict";function f(a,b,c){return _.clone(g).filter(function(d){return a&&!d.anon?!1:!b&&d.purge?!1:(d.href&&(d.href=c+d.href,d.target="galaxy_main"),d.confirm&&(d.func=function(){confirm(d.confirm)&&(galaxy_main.location=d.href)}),!0)})}var g=[{html:d("History Lists"),header:!0},{html:d("Saved Histories"),href:"history/list"},{html:d("Histories Shared with Me"),href:"history/list_shared"},{html:d("Current History"),header:!0,anon:!0},{html:d("Create New"),func:function(){Galaxy&&Galaxy.currHistoryPanel&&Galaxy.currHistoryPanel.createNewHistory()}},{html:d("Copy History"),func:function(){b(Galaxy.currHistoryPanel.model).done(function(){Galaxy.currHistoryPanel.loadCurrentHistory()})}},{html:d("Share or Publish"),href:"history/sharing"},{html:d("Show Structure"),href:"history/display_structured",anon:!0},{html:d("Extract Workflow"),href:"workflow/build_from_current_history"},{html:d("Delete"),anon:!0,func:function(){Galaxy&&Galaxy.currHistoryPanel&&confirm(d("Really delete the current history?"))&&(galaxy_main.window.location.href="history/delete?id="+Galaxy.currHistoryPanel.model.id)}},{html:d("Delete Permanently"),purge:!0,anon:!0,func:function(){Galaxy&&Galaxy.currHistoryPanel&&confirm(d("Really delete the current history permanently? This cannot be undone."))&&(galaxy_main.window.location.href="history/delete?purge=True&id="+Galaxy.currHistoryPanel.model.id)}},{html:d("Dataset Actions"),header:!0,anon:!0},{html:d("Copy Datasets"),href:"dataset/copy_datasets"},{html:d("Dataset Security"),href:"root/history_set_default_permissions"},{html:d("Resume Paused Jobs"),href:"history/resume_paused_jobs?current=True",anon:!0},{html:d("Collapse Expanded Datasets"),func:function(){Galaxy&&Galaxy.currHistoryPanel&&Galaxy.currHistoryPanel.collapseAll()}},{html:d("Unhide Hidden Datasets"),anon:!0,func:function(){Galaxy&&Galaxy.currHistoryPanel&&confirm(d("Really unhide all hidden datasets?"))&&$.post(Galaxy.root+"history/adjust_hidden",{user_action:"unhide"},function(){Galaxy.currHistoryPanel.loadCurrentHistory()})}},{html:d("Delete Hidden Datasets"),anon:!0,func:function(){Galaxy&&Galaxy.currHistoryPanel&&confirm(d("Really delete all hidden datasets?"))&&$.post(Galaxy.root+"history/adjust_hidden",{user_action:"delete"},function(){Galaxy.currHistoryPanel.loadCurrentHistory()})}},{html:d("Purge Deleted Datasets"),confirm:d("Really delete all deleted datasets permanently? This cannot be undone."),href:"history/purge_deleted_datasets",purge:!0,anon:!0},{html:d("Downloads"),header:!0},{html:d("Export Tool Citations"),href:"history/citations",anon:!0},{html:d("Export History to File"),href:"history/export_archive?preview=True",anon:!0},{html:d("Other Actions"),header:!0},{html:d("Import from File"),href:"history/import_archive"}];e.add({url:"api/webhooks/history-menu/all",async:!1,callback:function(a){var b=[];$.each(a.models,function(a,c){var e=c.toJSON();e.activate&&b.push({html:d(e.config.title),anon:!0})}),b.length>0&&(b.unshift({html:d("Webhooks"),header:!0}),$.merge(g,b))}});var h=function(b,c){c=c||{};var d=void 0===c.anonymous?!0:c.anonymous,e=c.purgeAllowed||!1,g=f(d,e,Galaxy.root);return new a(b,g)};return h});
|
||||
//# sourceMappingURL=../../../maps/mvc/history/options-menu.js.map
|
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|
||||
define(["utils/utils","mvc/tool/tool-form-base"],function(a,b){var c=Backbone.View.extend({initialize:function(c){var d=this;this.workflow=c.workflow,this.node=c.node,this.setElement("<div/>"),this.node?(this.post_job_actions=this.node.post_job_actions||{},a.deepeach(c.inputs,function(b){b.type&&(-1!=["data","data_collection"].indexOf(b.type)?(b.type="hidden",b.info="Data input '"+b.name+"' ("+a.textify(b.extensions)+")",b.value={__class__:"RuntimeValue"}):(b.collapsible_value={__class__:"RuntimeValue"},b.is_workflow=b.options&&0==b.options.length||-1!=["integer","float"].indexOf(b.type)))}),a.deepeach(c.inputs,function(a){"conditional"==a.type&&(a.test_param.collapsible_value=void 0)}),this._makeSections(c),this.form=new b(a.merge(c,{text_enable:"Set in Advance",text_disable:"Set at Runtime",narrow:!0,initial_errors:!0,sustain_version:!0,cls:"ui-portlet-narrow",update_url:Galaxy.root+"api/workflows/build_module",update:function(a){d.node.update_field_data(a),d.form.errors(a&&a.tool_model)}})),this.$el.append(this.form.$el)):Galaxy.emit.debug("tool-form-workflow::initialize()","Node not found in workflow.")},_makeSections:function(b){var c=b.inputs,d=b.datatypes;c[a.uid()]={label:"Annotation / Notes",name:"annotation",type:"text",area:!0,help:"Add an annotation or note for this step. It will be shown with the workflow.",value:this.node.annotation};var e=this.node.output_terminals&&Object.keys(this.node.output_terminals)[0];if(e){c[a.uid()]={name:"pja__"+e+"__EmailAction",label:"Email notification",type:"boolean",value:String(Boolean(this.post_job_actions["EmailAction"+e])),ignore:"false",help:"An email notification will be sent when the job has completed.",payload:{host:window.location.host}},c[a.uid()]={name:"pja__"+e+"__DeleteIntermediatesAction",label:"Output cleanup",type:"boolean",value:String(Boolean(this.post_job_actions["DeleteIntermediatesAction"+e])),ignore:"false",help:"Upon completion of this step, delete non-starred outputs from completed workflow steps if they are no longer required as inputs."};for(var f in this.node.output_terminals)c[a.uid()]=this._makeSection(f,d)}},_makeSection:function(a,b){function c(b,e){e=e||[],e.push(b);for(var f in b.inputs){var g=b.inputs[f],h=g.action;if(h){if(g.name="pja__"+a+"__"+g.action,g.pja_arg&&(g.name+="__"+g.pja_arg),g.payload)for(var i in g.payload){var j=g.payload[i];g.payload[g.name+"__"+i]=j,delete j}var k=d.post_job_actions[g.action+a];if(k){for(var l in e)e[l].expanded=!0;g.value=g.pja_arg?k.action_arguments&&k.action_arguments[g.pja_arg]||g.value:"true"}}g.inputs&&c(g,e.slice(0))}}var d=this,e=[],f=[];for(key in b)e.push({0:b[key],1:b[key]});for(key in this.node.input_terminals)f.push(this.node.input_terminals[key].name);e.sort(function(a,b){return a.label>b.label?1:a.label<b.label?-1:0}),e.unshift({0:"Sequences",1:"Sequences"}),e.unshift({0:"Roadmaps",1:"Roadmaps"}),e.unshift({0:"Leave unchanged",1:"__empty__"});var g={title:"Configure Output: '"+a+"'",type:"section",flat:!0,inputs:[{label:"Label",type:"text",value:(output=this.node.getWorkflowOutput(a))&&output.label||"",help:"This will provide a short name to describe the output - this must be unique across workflows.",onchange:function(b){d.workflow.attemptUpdateOutputLabel(d.node,a,b)}},{action:"RenameDatasetAction",pja_arg:"newname",label:"Rename dataset",type:"text",value:"",ignore:"",help:'This action will rename the output dataset. Click <a href="https://wiki.galaxyproject.org/Learn/AdvancedWorkflow/Variables">here</a> for more information. Valid inputs are: <strong>'+f.join(", ")+"</strong>."},{action:"ChangeDatatypeAction",pja_arg:"newtype",label:"Change datatype",type:"select",ignore:"__empty__",value:"__empty__",options:e,help:"This action will change the datatype of the output to the indicated value."},{action:"TagDatasetAction",pja_arg:"tags",label:"Tags",type:"text",value:"",ignore:"",help:"This action will set tags for the dataset."},{title:"Assign columns",type:"section",flat:!0,inputs:[{action:"ColumnSetAction",pja_arg:"chromCol",label:"Chrom column",type:"integer",value:"",ignore:""},{action:"ColumnSetAction",pja_arg:"startCol",label:"Start column",type:"integer",value:"",ignore:""},{action:"ColumnSetAction",pja_arg:"endCol",label:"End column",type:"integer",value:"",ignore:""},{action:"ColumnSetAction",pja_arg:"strandCol",label:"Strand column",type:"integer",value:"",ignore:""},{action:"ColumnSetAction",pja_arg:"nameCol",label:"Name column",type:"integer",value:"",ignore:""}],help:"This action will set column assignments in the output dataset. Blank fields are ignored."}]};return c(g),g}});return{View:c}});
|
||||
//# sourceMappingURL=../../../maps/mvc/tool/tool-form-workflow.js.map
|
||||
@@ -1,2 +1,2 @@
|
||||
define(["utils/utils","mvc/ui/ui-misc","mvc/ui/ui-modal","mvc/tool/tool-form-base","mvc/webhooks"],function(a,b,c,d,e){var f=Backbone.View.extend({initialize:function(e){var f=this;this.modal=parent.Galaxy.modal||new c.View,this.form=new d(a.merge({listen_to_history:!0,always_refresh:!1,customize:function(a){a.buttons={execute:execute_btn=new b.Button({icon:"fa-check",tooltip:"Execute: "+a.name+" ("+a.version+")",title:"Execute",cls:"ui-button btn btn-primary",floating:"clear",onclick:function(){execute_btn.wait(),f.form.portlet.disable(),f.submit(a,function(){execute_btn.unwait(),f.form.portlet.enable()})}})},a.job_id&&a.job_remap&&(a.inputs.rerun_remap_job_id={label:"Resume dependencies from this job",name:"rerun_remap_job_id",type:"select",display:"radio",ignore:"__ignore__",value:"__ignore__",options:[["Yes",a.job_id],["No","__ignore__"]],help:"The previous run of this tool failed and other tools were waiting for it to finish successfully. Use this option to resume those tools using the new output(s) of this tool run."})}},e)),this.deferred=this.form.deferred,this.setElement("<div/>"),this.$el.append(this.form.$el)},submit:function(b,c){var d=this,f={tool_id:b.id,tool_version:b.version,inputs:this.form.data.create()};if(this.form.trigger("reset"),!d.validate(f))return Galaxy.emit.debug("tool-form::submit()","Submission canceled. Validation failed."),void(c&&c());if(b.action!==Galaxy.root+"tool_runner/index"){var g=$("<form/>").attr({action:b.action,method:b.method,enctype:b.enctype});return _.each(f.inputs,function(a,b){g.append($("<input/>").attr({name:b,value:a}))}),g.hide().appendTo("body").submit().remove(),void(c&&c())}Galaxy.emit.debug("tool-form::submit()","Validation complete.",f),a.request({type:"POST",url:Galaxy.root+"api/tools",data:f,success:function(a){if(c&&c(),d.$el.children().hide(),d.$el.append(d._templateSuccess(a)),a.jobs&&a.jobs.length>0){d.$el.append($("<div/>",{id:"webhook-view"}));{new e.WebhookView({urlRoot:Galaxy.root+"api/webhooks/tool"})}}parent.Galaxy&&parent.Galaxy.currHistoryPanel&&parent.Galaxy.currHistoryPanel.refreshContents()},error:function(a){c&&c(),Galaxy.emit.debug("tool-form::submit","Submission failed.",a);var b=!1;if(a&&a.err_data){var e=d.form.data.matchResponse(a.err_data);for(var g in e){d.form.highlight(g,e[g]),b=!0;break}}b||d.modal.show({title:"Job submission failed",body:d._templateError(f,a&&a.err_msg),buttons:{Close:function(){d.modal.hide()}}})}})},validate:function(a){var b=a.inputs,c=-1,d=null;for(var e in b){var f=b[e],g=this.form.data.match(e),h=this.form.field_list[g],i=this.form.input_list[g];if(g&&i&&h){if(!i.optional&&null==f)return this.form.highlight(g),!1;if(f&&f.batch){var j=f.values.length,k=j>0&&f.values[0]&&f.values[0].src;if(k)if(null===d)d=k;else if(d!==k)return this.form.highlight(g,"Please select either dataset or dataset list fields for all batch mode fields."),!1;if(-1===c)c=j;else if(c!==j)return this.form.highlight(g,"Please make sure that you select the same number of inputs for all batch mode fields. This field contains <b>"+j+"</b> selection(s) while a previous field contains <b>"+c+"</b>."),!1}}else Galaxy.emit.debug("tool-form::validate()","Retrieving input objects failed.")}return!0},_templateSuccess:function(a){if(a.jobs&&a.jobs.length>0){var b=a.jobs.length,c=1==b?"1 job has":b+" jobs have",d=$("<div/>").addClass("donemessagelarge").append($("<p/>").text(c+" been successfully added to the queue - resulting in the following datasets:"));return _.each(a.outputs,function(a){d.append($("<p/>").addClass("messagerow").append($("<b/>").text(a.hid+": "+a.name)))}),d.append($("<p/>").append("<b/>").text("You can check the status of queued jobs and view the resulting data by refreshing the History pane. When the job has been run the status will change from 'running' to 'finished' if completed successfully or 'error' if problems were encountered.")),d}return this._templateError(a,"Invalid success response. No jobs found.")},_templateError:function(a,b){return $("<div/>").addClass("errormessagelarge").append($("<p/>").text("The server could not complete the request. Please contact the Galaxy Team if this error persists. "+(b||""))).append($("<pre/>").text(JSON.stringify(a,null,4)))}});return{View:f}});
|
||||
define(["utils/utils","mvc/ui/ui-misc","mvc/ui/ui-modal","mvc/tool/tool-form-base","mvc/webhooks"],function(a,b,c,d,e){var f=Backbone.View.extend({initialize:function(e){var f=this;this.modal=parent.Galaxy.modal||new c.View,this.form=new d(a.merge({listen_to_history:!0,always_refresh:!1,customize:function(a){var c=a.model.attributes;c.buttons={execute:execute_btn=new b.Button({icon:"fa-check",tooltip:"Execute: "+c.name+" ("+c.version+")",title:"Execute",cls:"ui-button btn btn-primary",floating:"clear",onclick:function(){execute_btn.wait(),a.portlet.disable(),f.submit(c,function(){execute_btn.unwait(),a.portlet.enable()})}})},c.job_id&&c.job_remap&&c.inputs.push({label:"Resume dependencies from this job",name:"rerun_remap_job_id",type:"select",display:"radio",ignore:"__ignore__",value:"__ignore__",options:[["Yes",c.job_id],["No","__ignore__"]],help:"The previous run of this tool failed and other tools were waiting for it to finish successfully. Use this option to resume those tools using the new output(s) of this tool run."})},postchange:function(b,c){var d={tool_id:c.model.get("id"),tool_version:c.model.get("version"),inputs:$.extend(!0,{},c.data.create())};c.wait(!0),Galaxy.emit.debug("tool-form::postchange()","Sending current state.",d),a.request({type:"POST",url:Galaxy.root+"api/tools/"+c.model.get("id")+"/build",data:d,success:function(a){c.update(a),c.wait(!1),Galaxy.emit.debug("tool-form::postchange()","Received new model.",a),b.resolve()},error:function(a){Galaxy.emit.debug("tool-form::postchange()","Refresh request failed.",a),b.reject()}})}},e)),this.deferred=this.form.deferred,this.setElement("<div/>"),this.$el.append(this.form.$el)},submit:function(b,c){var d=this,f={tool_id:b.id,tool_version:b.version,inputs:this.form.data.create()};if(this.form.trigger("reset"),!d.validate(f))return Galaxy.emit.debug("tool-form::submit()","Submission canceled. Validation failed."),void(c&&c());if(b.action!==Galaxy.root+"tool_runner/index"){var g=$("<form/>").attr({action:b.action,method:b.method,enctype:b.enctype});return _.each(f.inputs,function(a,b){g.append($("<input/>").attr({name:b,value:a}))}),g.hide().appendTo("body").submit().remove(),void(c&&c())}Galaxy.emit.debug("tool-form::submit()","Validation complete.",f),a.request({type:"POST",url:Galaxy.root+"api/tools",data:f,success:function(a){if(c&&c(),d.$el.children().hide(),d.$el.append(d._templateSuccess(a)),a.jobs&&a.jobs.length>0){d.$el.append($("<div/>",{id:"webhook-view"}));{new e.WebhookView({urlRoot:Galaxy.root+"api/webhooks/tool"})}}parent.Galaxy&&parent.Galaxy.currHistoryPanel&&parent.Galaxy.currHistoryPanel.refreshContents()},error:function(a){c&&c(),Galaxy.emit.debug("tool-form::submit","Submission failed.",a);var b=!1;if(a&&a.err_data){var e=d.form.data.matchResponse(a.err_data);for(var g in e){d.form.highlight(g,e[g]),b=!0;break}}b||d.modal.show({title:"Job submission failed",body:d._templateError(f,a&&a.err_msg),buttons:{Close:function(){d.modal.hide()}}})}})},validate:function(a){var b=a.inputs,c=-1,d=null;for(var e in b){var f=b[e],g=this.form.data.match(e),h=this.form.field_list[g],i=this.form.input_list[g];if(g&&i&&h){if(!i.optional&&null==f)return this.form.highlight(g),!1;if(f&&f.batch){var j=f.values.length,k=j>0&&f.values[0]&&f.values[0].src;if(k)if(null===d)d=k;else if(d!==k)return this.form.highlight(g,"Please select either dataset or dataset list fields for all batch mode fields."),!1;if(-1===c)c=j;else if(c!==j)return this.form.highlight(g,"Please make sure that you select the same number of inputs for all batch mode fields. This field contains <b>"+j+"</b> selection(s) while a previous field contains <b>"+c+"</b>."),!1}}else Galaxy.emit.debug("tool-form::validate()","Retrieving input objects failed.")}return!0},_templateSuccess:function(a){if(a.jobs&&a.jobs.length>0){var b=a.jobs.length,c=1==b?"1 job has":b+" jobs have",d=$("<div/>").addClass("donemessagelarge").append($("<p/>").text(c+" been successfully added to the queue - resulting in the following datasets:"));return _.each(a.outputs,function(a){d.append($("<p/>").addClass("messagerow").append($("<b/>").text(a.hid+": "+a.name)))}),d.append($("<p/>").append("<b/>").text("You can check the status of queued jobs and view the resulting data by refreshing the History pane. When the job has been run the status will change from 'running' to 'finished' if completed successfully or 'error' if problems were encountered.")),d}return this._templateError(a,"Invalid success response. No jobs found.")},_templateError:function(a,b){return $("<div/>").addClass("errormessagelarge").append($("<p/>").text("The server could not complete the request. Please contact the Galaxy Team if this error persists. "+(b||""))).append($("<pre/>").text(JSON.stringify(a,null,4)))}});return{View:f}});
|
||||
//# sourceMappingURL=../../../maps/mvc/tool/tool-form.js.map
|
||||
@@ -1,2 +1,2 @@
|
||||
define(["utils/utils","mvc/ui/ui-select-default","mvc/ui/ui-slider","mvc/ui/ui-options","mvc/ui/ui-drilldown","mvc/ui/ui-buttons","mvc/ui/ui-modal"],function(a,b,c,d,e,f,g){var h=Backbone.View.extend({tagName:"label",initialize:function(a){this.model=a&&a.model||new Backbone.Model(a),this.tagName=a.tagName||this.tagName,this.setElement($("<"+this.tagName+"/>")),this.listenTo(this.model,"change",this.render,this),this.render()},title:function(a){this.model.set("title",a)},value:function(){return this.model.get("title")},render:function(){return this.$el.removeClass().addClass("ui-label").addClass(this.model.get("cls")).html(this.model.get("title")),this}}),i=Backbone.View.extend({initialize:function(a){this.model=a&&a.model||new Backbone.Model({message:null,status:"info",cls:"",persistent:!1,fade:!0}).set(a),this.listenTo(this.model,"change",this.render,this),this.render()},update:function(a){this.model.set(a)},render:function(){this.$el.removeClass().addClass("ui-message").addClass(this.model.get("cls"));var a=this.model.get("status");if(this.model.get("large")?this.$el.addClass(("success"==a&&"done"||"danger"==a&&"error"||a)+"messagelarge"):this.$el.addClass("alert").addClass("alert-"+a),this.model.get("message")){if(this.$el.html(this.messageForDisplay()),this.$el[this.model.get("fade")?"fadeIn":"show"](),this.timeout&&window.clearTimeout(this.timeout),!this.model.get("persistent")){var b=this;this.timeout=window.setTimeout(function(){b.model.set("message","")},3e3)}}else this.$el.fadeOut();return this},messageForDisplay:function(){return _.escape(this.model.get("message"))}}),j=i.extend({messageForDisplay:function(){return this.model.get("message")}}),k=Backbone.View.extend({initialize:function(a){this.model=a&&a.model||new Backbone.Model({type:"text",placeholder:"",disabled:!1,readonly:!1,visible:!0,cls:"",area:!1,color:null,style:null}).set(a),this.tagName=this.model.get("area")?"textarea":"input",this.setElement($("<"+this.tagName+"/>")),this.listenTo(this.model,"change",this.render,this),this.render()},events:{input:"_onchange"},value:function(a){return void 0!==a&&this.model.set("value","string"==typeof a?a:""),this.model.get("value")},render:function(){var a=this;return this.$el.removeClass().addClass("ui-"+this.tagName).addClass(this.model.get("cls")).addClass(this.model.get("style")).attr("id",this.model.id).attr("type",this.model.get("type")).attr("placeholder",this.model.get("placeholder")).css("color",this.model.get("color")||"").css("border-color",this.model.get("color")||""),this.model.get("value")!==this.$el.val()&&this.$el.val(this.model.get("value")),_.each(["readonly","disabled"],function(b){a.model.get(b)?a.$el.attr(b,!0):a.$el.removeAttr(b)}),this.$el[this.model.get("visible")?"show":"hide"](),this},_onchange:function(){this.value(this.$el.val()),this.model.get("onchange")&&this.model.get("onchange")(this.model.get("value"))}}),l=Backbone.View.extend({initialize:function(a){this.model=a&&a.model||new Backbone.Model(a),this.setElement($("<div/>").append(this.$info=$("<div/>")).append(this.$hidden=$("<div/>"))),this.listenTo(this.model,"change",this.render,this),this.render()},value:function(a){return void 0!==a&&this.model.set("value",a),this.model.get("value")},render:function(){return this.$el.attr("id",this.model.id),this.$hidden.val(this.model.get("value")),this.model.get("info")?this.$info.show().html(this.model.get("info")):this.$info.hide(),this}});return{Button:f.ButtonDefault,ButtonIcon:f.ButtonIcon,ButtonCheck:f.ButtonCheck,ButtonMenu:f.ButtonMenu,ButtonLink:f.ButtonLink,Input:k,Label:h,Message:i,UnescapedMessage:j,Modal:g,RadioButton:d.RadioButton,Checkbox:d.Checkbox,Radio:d.Radio,Select:b,Hidden:l,Slider:c,Drilldown:e}});
|
||||
define(["utils/utils","mvc/ui/ui-select-default","mvc/ui/ui-slider","mvc/ui/ui-options","mvc/ui/ui-drilldown","mvc/ui/ui-buttons","mvc/ui/ui-modal"],function(a,b,c,d,e,f,g){var h=Backbone.View.extend({tagName:"label",initialize:function(a){this.model=a&&a.model||new Backbone.Model(a),this.tagName=a.tagName||this.tagName,this.setElement($("<"+this.tagName+"/>")),this.listenTo(this.model,"change",this.render,this),this.render()},title:function(a){this.model.set("title",a)},value:function(){return this.model.get("title")},render:function(){return this.$el.removeClass().addClass("ui-label").addClass(this.model.get("cls")).html(this.model.get("title")),this}}),i=Backbone.View.extend({initialize:function(a){this.model=a&&a.model||new Backbone.Model({message:null,status:"info",cls:"",persistent:!1,fade:!0}).set(a),this.listenTo(this.model,"change",this.render,this),this.render()},update:function(a){this.model.set(a)},render:function(){this.$el.removeClass().addClass("ui-message").addClass(this.model.get("cls"));var a=this.model.get("status");if(this.model.get("large")?this.$el.addClass(("success"==a&&"done"||"danger"==a&&"error"||a)+"messagelarge"):this.$el.addClass("alert").addClass("alert-"+a),this.model.get("message")){if(this.$el.html(this.messageForDisplay()),this.$el[this.model.get("fade")?"fadeIn":"show"](),this.timeout&&window.clearTimeout(this.timeout),!this.model.get("persistent")){var b=this;this.timeout=window.setTimeout(function(){b.model.set("message","")},3e3)}}else this.$el.fadeOut();return this},messageForDisplay:function(){return _.escape(this.model.get("message"))}}),j=i.extend({messageForDisplay:function(){return this.model.get("message")}}),k=Backbone.View.extend({initialize:function(a){this.model=a&&a.model||new Backbone.Model({type:"text",placeholder:"",disabled:!1,readonly:!1,visible:!0,cls:"",area:!1,color:null,style:null}).set(a),this.tagName=this.model.get("area")?"textarea":"input",this.setElement($("<"+this.tagName+"/>")),this.listenTo(this.model,"change",this.render,this),this.render()},events:{input:"_onchange"},value:function(a){return void 0!==a&&this.model.set("value","string"==typeof a?a:""),this.model.get("value")},render:function(){var a=this;this.$el.removeClass().addClass("ui-"+this.tagName).addClass(this.model.get("cls")).addClass(this.model.get("style")).attr("id",this.model.id).attr("type",this.model.get("type")).attr("placeholder",this.model.get("placeholder")).css("color",this.model.get("color")||"").css("border-color",this.model.get("color")||"");var b=this.model.get("datalist");return $.isArray(b)&&b.length>0&&this.$el.autocomplete({source:function(b,c){c(a.model.get("datalist"))},change:function(){a._onchange()}}),this.model.get("value")!==this.$el.val()&&this.$el.val(this.model.get("value")),_.each(["readonly","disabled"],function(b){a.model.get(b)?a.$el.attr(b,!0):a.$el.removeAttr(b)}),this.$el[this.model.get("visible")?"show":"hide"](),this},_onchange:function(){this.value(this.$el.val()),this.model.get("onchange")&&this.model.get("onchange")(this.model.get("value"))}}),l=Backbone.View.extend({initialize:function(a){this.model=a&&a.model||new Backbone.Model(a),this.setElement($("<div/>").append(this.$info=$("<div/>")).append(this.$hidden=$("<div/>"))),this.listenTo(this.model,"change",this.render,this),this.render()},value:function(a){return void 0!==a&&this.model.set("value",a),this.model.get("value")},render:function(){return this.$el.attr("id",this.model.id),this.$hidden.val(this.model.get("value")),this.model.get("info")?this.$info.show().html(this.model.get("info")):this.$info.hide(),this}});return{Button:f.ButtonDefault,ButtonIcon:f.ButtonIcon,ButtonCheck:f.ButtonCheck,ButtonMenu:f.ButtonMenu,ButtonLink:f.ButtonLink,Input:k,Label:h,Message:i,UnescapedMessage:j,Modal:g,RadioButton:d.RadioButton,Checkbox:d.Checkbox,Radio:d.Radio,Select:b,Hidden:l,Slider:c,Drilldown:e}});
|
||||
//# sourceMappingURL=../../../maps/mvc/ui/ui-misc.js.map
|
||||
@@ -1,2 +1,2 @@
|
||||
define(["utils/utils","mvc/ui/ui-misc"],function(a,b){var c=Backbone.View.extend({visible:!1,initialize:function(c){var d=this;this.model=c&&c.model||new Backbone.Model({id:a.uid(),cls:"ui-portlet",title:"",icon:"",buttons:null,body:null,scrollable:!0,nopadding:!1,operations:null,collapsible:!1,collapsible_button:!1,collapsed:!1}).set(c),this.setElement(this._template()),this.$body=this.$(".portlet-body"),this.$title_text=this.$(".portlet-title-text"),this.$title_icon=this.$(".portlet-title-icon"),this.$header=this.$(".portlet-header"),this.$content=this.$(".portlet-content"),this.$backdrop=this.$(".portlet-backdrop"),this.$buttons=this.$(".portlet-buttons"),this.$operations=this.$(".portlet-operations"),this.model.get("body")&&this.append(this.model.get("body")),this.collapsible_button=new b.ButtonIcon({icon:"fa-eye",tooltip:"Collapse/Expand",cls:"ui-button-icon-plain",onclick:function(){d[d.collapsed?"expand":"collapse"]()}}),this.render()},render:function(){var a=this,b=this.model.attributes;return this.$el.removeClass().addClass(b.cls).attr("id",b.id),this.$header[b.title?"show":"hide"](),this.$title_text.html(b.title),_.each([this.$content,this.$body],function(a){a[b.nopadding?"addClass":"removeClass"]("no-padding")}),b.icon?this.$title_icon.removeClass().addClass("portlet-title-icon fa").addClass(b.icon).show():this.$title_icon.hide(),this.$title_text[b.collapsible?"addClass":"removeClass"]("no-highlight collapsible").off(),b.collapsible&&(this.$title_text.on("click",function(){a[a.collapsed?"expand":"collapse"]()}),b.collapsed?this.collapse():this.expand()),b.buttons?(this.$buttons.empty().show(),$.each(this.model.get("buttons"),function(b,c){c.$el.prop("id",b),a.$buttons.append(c.$el)})):this.$buttons.hide(),this.$operations.empty,b.collapsible_button&&this.$operations.append(this.collapsible_button.$el),b.operations&&$.each(b.operations,function(b,c){c.$el.prop("id",b),a.$operations.append(c.$el)}),this},append:function(a){this.$body.append(a)},empty:function(){this.$body.empty()},header:function(){return this.$header},body:function(){return this.$body},show:function(){this.visible=!0,this.$el.fadeIn("fast")},hide:function(){this.visible=!1,this.$el.hide()},enableButton:function(a){this.$buttons.find("#"+a).prop("disabled",!1)},disableButton:function(a){this.$buttons.find("#"+a).prop("disabled",!0)},hideOperation:function(a){this.$operations.find("#"+a).hide()},showOperation:function(a){this.$operations.find("#"+a).show()},setOperation:function(a,b){this.$operations.find("#"+a).off("click").on("click",b)},title:function(a){return a&&this.$title_text.html(a),this.$title_text.html()},collapse:function(){this.collapsed=!0,this.$content.height("0%"),this.$body.hide(),this.collapsible_button.setIcon("fa-eye-slash")},expand:function(){this.collapsed=!1,this.$content.height("100%"),this.$body.fadeIn("fast"),this.collapsible_button.setIcon("fa-eye")},disable:function(){this.$backdrop.show()},enable:function(){this.$backdrop.hide()},_template:function(){return $("<div/>").append($("<div/>").addClass("portlet-header").append($("<div/>").addClass("portlet-operations")).append($("<div/>").addClass("portlet-title").append($("<i/>").addClass("portlet-title-icon")).append($("<span/>").addClass("portlet-title-text")))).append($("<div/>").addClass("portlet-content").append($("<div/>").addClass("portlet-body")).append($("<div/>").addClass("portlet-buttons"))).append($("<div/>").addClass("portlet-backdrop"))}});return{View:c}});
|
||||
define(["utils/utils","mvc/ui/ui-misc"],function(a,b){var c=Backbone.View.extend({visible:!1,initialize:function(c){var d=this;this.model=c&&c.model||new Backbone.Model({id:a.uid(),cls:"ui-portlet",title:"",icon:"",buttons:null,body:null,scrollable:!0,nopadding:!1,operations:null,collapsible:!1,collapsible_button:!1,collapsed:!1,onchange_title:null}).set(c),this.setElement(this._template()),this.$body=this.$(".portlet-body"),this.$title_text=this.$(".portlet-title-text"),this.$title_icon=this.$(".portlet-title-icon"),this.$header=this.$(".portlet-header"),this.$content=this.$(".portlet-content"),this.$backdrop=this.$(".portlet-backdrop"),this.$buttons=this.$(".portlet-buttons"),this.$operations=this.$(".portlet-operations"),this.model.get("body")&&this.append(this.model.get("body")),this.collapsible_button=new b.ButtonIcon({icon:"fa-eye",tooltip:"Collapse/Expand",cls:"ui-button-icon-plain",onclick:function(){d[d.collapsed?"expand":"collapse"]()}}),this.render()},render:function(){var a=this,b=this.model.attributes;return this.$el.removeClass().addClass(b.cls).attr("id",b.id),this.$header[b.title?"show":"hide"](),this.$title_text.html(b.title),_.each([this.$content,this.$body],function(a){a[b.nopadding?"addClass":"removeClass"]("no-padding")}),b.icon?this.$title_icon.removeClass().addClass("portlet-title-icon fa").addClass(b.icon).show():this.$title_icon.hide(),this.$title_text[b.collapsible?"addClass":"removeClass"]("no-highlight collapsible").off(),b.collapsible&&(this.$title_text.on("click",function(){a[a.collapsed?"expand":"collapse"]()}),b.collapsed?this.collapse():this.expand()),this.$title_text.prop("disabled",!b.onchange_title),b.onchange_title&&this.$title_text.make_text_editable({on_finish:function(a){b.onchange_title(a)}}),b.buttons?(this.$buttons.empty().show(),$.each(this.model.get("buttons"),function(b,c){c.$el.prop("id",b),a.$buttons.append(c.$el)})):this.$buttons.hide(),this.$operations.empty,b.collapsible_button&&this.$operations.append(this.collapsible_button.$el),b.operations&&$.each(b.operations,function(b,c){c.$el.prop("id",b),a.$operations.append(c.$el)}),this},append:function(a){this.$body.append(a)},empty:function(){this.$body.empty()},header:function(){return this.$header},body:function(){return this.$body},show:function(){this.visible=!0,this.$el.fadeIn("fast")},hide:function(){this.visible=!1,this.$el.hide()},enableButton:function(a){this.$buttons.find("#"+a).prop("disabled",!1)},disableButton:function(a){this.$buttons.find("#"+a).prop("disabled",!0)},hideOperation:function(a){this.$operations.find("#"+a).hide()},showOperation:function(a){this.$operations.find("#"+a).show()},setOperation:function(a,b){this.$operations.find("#"+a).off("click").on("click",b)},title:function(a){return a&&this.$title_text.html(a),this.$title_text.html()},collapse:function(){this.collapsed=!0,this.$content.height("0%"),this.$body.hide(),this.collapsible_button.setIcon("fa-eye-slash")},expand:function(){this.collapsed=!1,this.$content.height("100%"),this.$body.fadeIn("fast"),this.collapsible_button.setIcon("fa-eye")},disable:function(){this.$backdrop.show()},enable:function(){this.$backdrop.hide()},_template:function(){return $("<div/>").append($("<div/>").addClass("portlet-header").append($("<div/>").addClass("portlet-operations")).append($("<div/>").addClass("portlet-title").append($("<i/>").addClass("portlet-title-icon")).append($("<span/>").addClass("portlet-title-text")))).append($("<div/>").addClass("portlet-content").append($("<div/>").addClass("portlet-body")).append($("<div/>").addClass("portlet-buttons"))).append($("<div/>").addClass("portlet-backdrop"))}});return{View:c}});
|
||||
//# sourceMappingURL=../../../maps/mvc/ui/ui-portlet.js.map
|
||||
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|
||||
define(["utils/utils"],function(a){return Backbone.View.extend({initialize:function(b){var c=this;this.options=a.merge(b,{class_add:"upload-icon-button fa fa-square-o",class_remove:"upload-icon-button fa fa-check-square-o",class_partial:"upload-icon-button fa fa-minus-square-o",collection:null,onchange:function(){},onadd:function(){},onremove:function(){}}),this.collection=this.options.collection,this.setElement(this._template()),this.rows=[],a.get({url:Galaxy.root+"api/remote_files",success:function(a){c._fill(a)},error:function(){c._fill()}})},_fill:function(b){if(b&&b.length>0){this.$(".upload-ftp-content").html($(this._templateTable()));var c=0;for(index in b)this.rows.push(this._add(b[index])),c+=b[index].size;if(this.$(".upload-ftp-number").html(b.length+" files"),this.$(".upload-ftp-disk").html(a.bytesToString(c,!0)),this.collection){var d=this;this.$("._has_collection").show(),this.$select_all=this.$(".upload-selectall").addClass(this.options.class_add),this.$select_all.on("click",function(){var a=d.$select_all.hasClass(d.options.class_add);for(index in b){var c=b[index],e=d._find(c);(!e&&a||e&&!a)&&d.rows[index].trigger("click")}}),this._refresh()}}else this.$(".upload-ftp-content").html($(this._templateInfo()));this.$(".upload-ftp-wait").hide()},_add:function(a){var b=this,c=$(this._templateRow(a)),d=c.find(".icon");return this.$("tbody").append(c),this.collection?(d.addClass(this._find(a)?this.options.class_remove:this.options.class_add),c.on("click",function(){var c=b._find(a);d.removeClass(),c?(b.options.onremove(c),d.addClass(b.options.class_add)):(b.options.onadd(a),d.addClass(b.options.class_remove)),b._refresh()})):c.on("click",function(){b.options.onchange(a)}),c},_refresh:function(){var a=this.collection.where({file_mode:"ftp",enabled:!0});this.$select_all.removeClass(),this.$select_all.addClass(0==a.length?this.options.class_add:a.length==this.rows.length?this.options.class_remove:this.options.class_partial)},_find:function(a){var b=this.collection.findWhere({file_path:a.path,file_mode:"ftp",enabled:!0});return b&&b.get("id")},_templateRow:function(b){return'<tr class="upload-ftp-row"><td class="_has_collection" style="display: none;"><div class="icon"/></td><td class="ftp-name">'+b.path+'</td><td class="ftp-size">'+a.bytesToString(b.size)+'</td><td class="ftp-time">'+b.ctime+"</td></tr>"},_templateTable:function(){return'<span style="whitespace: nowrap; float: left;">Available files: </span><span style="whitespace: nowrap; float: right;"><span class="upload-icon fa fa-file-text-o"/><span class="upload-ftp-number"/> <span class="upload-icon fa fa-hdd-o"/><span class="upload-ftp-disk"/></span><table class="grid" style="float: left;"><thead><tr><th class="_has_collection" style="display: none;"><div class="upload-selectall"></th><th>Name</th><th>Size</th><th>Created</th></tr></thead><tbody/></table>'},_templateInfo:function(){return'<div class="upload-ftp-warning warningmessage">Your FTP directory does not contain any files.</div>'},_template:function(){return'<div class="upload-ftp"><div class="upload-ftp-wait fa fa-spinner fa-spin"/><div class="upload-ftp-help">This Galaxy server allows you to upload files via FTP. To upload some files, log in to the FTP server at <strong>'+this.options.ftp_upload_site+'</strong> using your Galaxy credentials (email address and password).</div><div class="upload-ftp-content"/><div>'}})});
|
||||
define(["utils/utils"],function(a){return Backbone.View.extend({initialize:function(b){var c=this;this.options=a.merge(b,{class_add:"upload-icon-button fa fa-square-o",class_remove:"upload-icon-button fa fa-check-square-o",class_partial:"upload-icon-button fa fa-minus-square-o",collection:null,onchange:function(){},onadd:function(){},onremove:function(){}}),this.collection=this.options.collection,this.setElement(this._template()),this.rows=[],a.get({url:Galaxy.root+"api/remote_files",success:function(a){c._fill(a)},error:function(){c._fill()}})},_fill:function(b){if(b&&b.length>0){this.$(".upload-ftp-content").html($(this._templateTable()));var c=0;for(index in b)this.rows.push(this._add(b[index])),c+=b[index].size;if(this.$(".upload-ftp-number").html(b.length+" files"),this.$(".upload-ftp-disk").html(a.bytesToString(c,!0)),this.collection){var d=this;this.$("._has_collection").show(),this.$select_all=this.$(".upload-selectall").addClass(this.options.class_add),this.$select_all.on("click",function(){var a=d.$select_all.hasClass(d.options.class_add);for(index in b){var c=b[index],e=d._find(c);(!e&&a||e&&!a)&&d.rows[index].trigger("click")}}),this._refresh()}}else this.$(".upload-ftp-content").html($(this._templateInfo()));this.$(".upload-ftp-wait").hide()},_add:function(a){var b=this,c=$(this._templateRow(a)),d=c.find(".icon");return this.$("tbody").append(c),this.collection?(d.addClass(this._find(a)?this.options.class_remove:this.options.class_add),c.on("click",function(){var c=b._find(a);d.removeClass(),c?(b.options.onremove(c),d.addClass(b.options.class_add)):(b.options.onadd(a),d.addClass(b.options.class_remove)),b._refresh()})):c.on("click",function(){b.options.onchange(a)}),c},_refresh:function(){var a=this.collection.where({file_mode:"ftp",enabled:!0});this.$select_all.removeClass(),this.$select_all.addClass(0==a.length?this.options.class_add:a.length==this.rows.length?this.options.class_remove:this.options.class_partial)},_find:function(a){var b=this.collection.findWhere({file_path:a.path,file_mode:"ftp",enabled:!0});return b&&b.get("id")},_templateRow:function(b){return'<tr class="upload-ftp-row"><td class="_has_collection" style="display: none;"><div class="icon"/></td><td class="ftp-name">'+_.escape(b.path)+'</td><td class="ftp-size">'+a.bytesToString(b.size)+'</td><td class="ftp-time">'+b.ctime+"</td></tr>"},_templateTable:function(){return'<span style="whitespace: nowrap; float: left;">Available files: </span><span style="whitespace: nowrap; float: right;"><span class="upload-icon fa fa-file-text-o"/><span class="upload-ftp-number"/> <span class="upload-icon fa fa-hdd-o"/><span class="upload-ftp-disk"/></span><table class="grid" style="float: left;"><thead><tr><th class="_has_collection" style="display: none;"><div class="upload-selectall"></th><th>Name</th><th>Size</th><th>Created</th></tr></thead><tbody/></table>'},_templateInfo:function(){return'<div class="upload-ftp-warning warningmessage">Your FTP directory does not contain any files.</div>'},_template:function(){return'<div class="upload-ftp"><div class="upload-ftp-wait fa fa-spinner fa-spin"/><div class="upload-ftp-help">This Galaxy server allows you to upload files via FTP. To upload some files, log in to the FTP server at <strong>'+this.options.ftp_upload_site+'</strong> using your Galaxy credentials (email address and password).</div><div class="upload-ftp-content"/><div>'}})});
|
||||
//# sourceMappingURL=../../../maps/mvc/upload/upload-ftp.js.map
|
||||
@@ -1,2 +1,2 @@
|
||||
define(["mvc/base-mvc","utils/localization"],function(a,b){"use strict";var c="user",d=Backbone.View.extend(a.LoggableMixin).extend({_logNamespace:c,options:{warnAtPercent:85,errorAtPercent:100},initialize:function(a){this.log(this+".initialize:",a),_.extend(this.options,a),this.listenTo(this.model,"change:quota_percent change:total_disk_usage",this.render)},update:function(a){return this.log(this+" updating user data...",a),this.model.loadFromApi(this.model.get("id"),a),this},isOverQuota:function(){return null!==this.model.get("quota_percent")&&this.model.get("quota_percent")>=this.options.errorAtPercent},_render_quota:function(){var a=this.model.toJSON(),b=a.quota_percent,c=$(this._templateQuotaMeter(a)),d=c.find(".progress-bar");return this.isOverQuota()?(d.attr("class","progress-bar progress-bar-danger"),c.find(".quota-meter-text").css("color","white"),this.trigger("quota:over",a)):b>=this.options.warnAtPercent?(d.attr("class","progress-bar progress-bar-warning"),this.trigger("quota:under quota:under:approaching",a)):(d.attr("class","progress-bar progress-bar-success"),this.trigger("quota:under quota:under:ok",a)),c},_render_usage:function(){var a=$(this._templateUsage(this.model.toJSON()));return this.log(this+".rendering usage:",a),a},render:function(){var a=null;return this.log(this+".model.quota_percent:",this.model.get("quota_percent")),a=null===this.model.get("quota_percent")||void 0===this.model.get("quota_percent")?this._render_usage():this._render_quota(),this.$el.html(a),this.$el.find(".quota-meter-text").tooltip(),this},_templateQuotaMeter:function(a){return['<div id="quota-meter" class="quota-meter progress">','<div class="progress-bar" style="width: ',a.quota_percent,'%"></div>','<div class="quota-meter-text" style="top: 6px"',a.nice_total_disk_usage?' title="Using '+a.nice_total_disk_usage+'">':">",b("Using")," ",a.quota_percent,"%","</div>","</div>"].join("")},_templateUsage:function(a){return['<div id="quota-meter" class="quota-meter" style="background-color: transparent">','<div class="quota-meter-text" style="top: 6px; color: white">',a.nice_total_disk_usage?b("Using ")+a.nice_total_disk_usage:"","</div>","</div>"].join("")},toString:function(){return"UserQuotaMeter("+this.model+")"}});return{UserQuotaMeter:d}});
|
||||
define(["mvc/base-mvc","utils/localization"],function(a,b){"use strict";var c="user",d=Backbone.View.extend(a.LoggableMixin).extend({_logNamespace:c,options:{warnAtPercent:85,errorAtPercent:100},initialize:function(a){this.log(this+".initialize:",a),_.extend(this.options,a),this.listenTo(this.model,"change:quota_percent change:total_disk_usage",this.render)},update:function(a){return this.log(this+" updating user data...",a),this.model.loadFromApi(this.model.get("id"),a),this},isOverQuota:function(){return null!==this.model.get("quota_percent")&&this.model.get("quota_percent")>=this.options.errorAtPercent},_render_quota:function(){var a=this.model.toJSON(),b=a.quota_percent,c=$(this._templateQuotaMeter(a)),d=c.find(".progress-bar");return this.isOverQuota()?(d.attr("class","progress-bar progress-bar-danger"),c.find(".quota-meter-text").css("color","white"),this.trigger("quota:over",a)):b>=this.options.warnAtPercent?(d.attr("class","progress-bar progress-bar-warning"),this.trigger("quota:under quota:under:approaching",a)):(d.attr("class","progress-bar progress-bar-success"),this.trigger("quota:under quota:under:ok",a)),c},_render_usage:function(){var a=$(this._templateUsage(this.model.toJSON()));return this.log(this+".rendering usage:",a),a},render:function(){var a=null;return this.log(this+".model.quota_percent:",this.model.get("quota_percent")),a=null===this.model.get("quota_percent")||void 0===this.model.get("quota_percent")?this._render_usage():this._render_quota(),this.$el.html(a),this.$el.find(".quota-meter-text").tooltip(),this},_templateQuotaMeter:function(a){return['<div id="quota-meter" class="quota-meter progress">','<div class="progress-bar" style="width: ',a.quota_percent,'%"></div>','<div class="quota-meter-text" data-placement="left" style="top: 6px"',a.nice_total_disk_usage?' title="Using '+a.nice_total_disk_usage+'. This value is recalculated when you log out.">':">",b("Using")," ",a.quota_percent,"%","</div>","</div>"].join("")},_templateUsage:function(a){return['<div id="quota-meter" class="quota-meter" style="background-color: transparent">','<div class="quota-meter-text" data-placement="left" data-original-title="This value is recalculated when you log out." style="top: 6px; color: white">',a.nice_total_disk_usage?b("Using ")+a.nice_total_disk_usage:"","</div>","</div>"].join("")},toString:function(){return"UserQuotaMeter("+this.model+")"}});return{UserQuotaMeter:d}});
|
||||
//# sourceMappingURL=../../../maps/mvc/user/user-quotameter.js.map
|
||||
@@ -1,2 +1,2 @@
|
||||
define([],function(){function a(a,b,c){this.app=a,this.cv=b,this.cc=this.cv.find("#canvas-container"),this.overview=c,this.oc=c.find("#overview-canvas"),this.ov=c.find("#overview-viewport"),this.init_drag()}function b(a){this.panel=a}return $.extend(a.prototype,{init_drag:function(){var a=this,c=function(b,c){b=Math.min(b,a.cv.width()/2),b=Math.max(b,-a.cc.width()+a.cv.width()/2),c=Math.min(c,a.cv.height()/2),c=Math.max(c,-a.cc.height()+a.cv.height()/2),a.cc.css({left:b,top:c}),a.cv.css({"background-position-x":b,"background-position-y":c}),a.update_viewport_overlay()};this.cc.each(function(){this.scroll_panel=new b(this)});var d,e;this.cv.bind("dragstart",function(){var b=$(this).offset(),c=a.cc.position();e=c.top-b.top,d=c.left-b.left}).bind("drag",function(a,b){c(b.offsetX+d,b.offsetY+e)}).bind("dragend",function(){a.app.workflow.fit_canvas_to_nodes(),a.draw_overview()}),this.overview.click(function(b){if(a.overview.hasClass("blockaclick"))a.overview.removeClass("blockaclick");else{var d=a.cc.width(),e=a.cc.height(),f=a.oc.width(),g=a.oc.height(),h=b.pageX-a.oc.offset().left-a.ov.width()/2,i=b.pageY-a.oc.offset().top-a.ov.height()/2;c(-(h/f*d),-(i/g*e)),a.app.workflow.fit_canvas_to_nodes(),a.draw_overview()}}),this.ov.bind("drag",function(b,d){var e=a.cc.width(),f=a.cc.height(),g=a.oc.width(),h=a.oc.height(),i=d.offsetX-a.overview.offset().left,j=d.offsetY-a.overview.offset().top;c(-(i/g*e),-(j/h*f))}).bind("dragend",function(){a.overview.addClass("blockaclick"),a.app.workflow.fit_canvas_to_nodes(),a.draw_overview()}),$("#overview-border").bind("drag",function(b,c){var d=$(this).offsetParent(),e=d.offset(),f=Math.max(d.width()-(c.offsetX-e.left),d.height()-(c.offsetY-e.top));$(this).css({width:f,height:f}),a.draw_overview()}),$("#overview-border div").bind("drag",function(){})},update_viewport_overlay:function(){var a=this.cc,b=this.cv,c=this.oc,d=this.ov,e=a.width(),f=a.height(),g=c.width(),h=c.height(),i=a.position();d.css({left:-(i.left/e*g),top:-(i.top/f*h),width:b.width()/e*g-2,height:b.height()/f*h-2})},draw_overview:function(){var a,b,c,d,e=$("#overview-canvas"),f=e.parent().parent().width(),g=e.get(0).getContext("2d"),h=$("#canvas-container").width(),i=$("#canvas-container").height(),j=this.cv.width(),k=this.cv.height();j>h&&k>i?(c=h/j*f,d=(f-c)/2,a=i/k*f,b=(f-a)/2):i>h?(b=0,a=f,c=Math.ceil(a*h/i),d=(f-c)/2):(c=f,d=0,a=Math.ceil(c*i/h),b=(f-a)/2),e.parent().css({left:d,top:b,width:c,height:a}),e.attr("width",c),e.attr("height",a),$.each(this.app.workflow.nodes,function(b,d){g.fillStyle="#D2C099",g.strokeStyle="#D8B365",g.lineWidth=1;var e=$(d.element),f=e.position(),j=f.left/h*c,k=f.top/i*a,l=e.width()/h*c,m=e.height()/i*a;d.tool_errors?(g.fillStyle="#FFCCCC",g.strokeStyle="#AA6666"):void 0!==d.workflow_outputs&&d.workflow_outputs.length>0&&(g.fillStyle="#E8A92D",g.strokeStyle="#E8A92D"),g.fillRect(j,k,l,m),g.strokeRect(j,k,l,m)}),this.update_viewport_overlay()}}),$.extend(b.prototype,{test:function(a,b){clearTimeout(this.timeout);var c=a.pageX,d=a.pageY,e=$(this.panel),f=e.position(),g=e.width(),h=e.height(),i=e.parent(),j=i.width(),k=i.height(),l=i.offset(),m=l.left,n=l.top,o=m+i.width(),p=n+i.height(),q=-(g-j/2),r=-(h-k/2),s=j/2,t=k/2,u=!1,v=5,w=23;if(m>c-v){if(f.left<s){var x=Math.min(w,s-f.left);e.css("left",f.left+x),u=!0}}else if(c+v>o){if(f.left>q){var x=Math.min(w,f.left-q);e.css("left",f.left-x),u=!0}}else if(n>d-v){if(f.top<t){var x=Math.min(w,t-f.top);e.css("top",f.top+x),u=!0}}else if(d+v>p&&f.top>r){var x=Math.min(w,f.top-q);e.css("top",f.top-x+"px"),u=!0}if(u){b();var e=this;this.timeout=setTimeout(function(){e.test(a,b)},50)}},stop:function(){clearTimeout(this.timeout)}}),a});
|
||||
define([],function(){function a(a,b,c){this.app=a,this.cv=b,this.cc=this.cv.find("#canvas-container"),this.overview=c,this.oc=c.find("#overview-canvas"),this.ov=c.find("#overview-viewport"),this.init_drag()}function b(a){this.panel=a}return $.extend(a.prototype,{init_drag:function(){var a=this,c=function(b,c){b=Math.min(b,a.cv.width()/2),b=Math.max(b,-a.cc.width()+a.cv.width()/2),c=Math.min(c,a.cv.height()/2),c=Math.max(c,-a.cc.height()+a.cv.height()/2),a.cc.css({left:b,top:c}),a.cv.css({"background-position-x":b,"background-position-y":c}),a.update_viewport_overlay()};this.cc.each(function(){this.scroll_panel=new b(this)});var d,e;this.cv.bind("dragstart",function(){var b=$(this).offset(),c=a.cc.position();e=c.top-b.top,d=c.left-b.left}).bind("drag",function(a,b){c(b.offsetX+d,b.offsetY+e)}).bind("dragend",function(){a.app.workflow.fit_canvas_to_nodes(),a.draw_overview()}),this.overview.click(function(b){if(a.overview.hasClass("blockaclick"))a.overview.removeClass("blockaclick");else{var d=a.cc.width(),e=a.cc.height(),f=a.oc.width(),g=a.oc.height(),h=b.pageX-a.oc.offset().left-a.ov.width()/2,i=b.pageY-a.oc.offset().top-a.ov.height()/2;c(-(h/f*d),-(i/g*e)),a.app.workflow.fit_canvas_to_nodes(),a.draw_overview()}}),this.ov.bind("drag",function(b,d){var e=a.cc.width(),f=a.cc.height(),g=a.oc.width(),h=a.oc.height(),i=d.offsetX-a.overview.offset().left,j=d.offsetY-a.overview.offset().top;c(-(i/g*e),-(j/h*f))}).bind("dragend",function(){a.overview.addClass("blockaclick"),a.app.workflow.fit_canvas_to_nodes(),a.draw_overview()}),$("#overview-border").bind("drag",function(b,c){var d=$(this).offsetParent(),e=d.offset(),f=Math.max(d.width()-(c.offsetX-e.left),d.height()-(c.offsetY-e.top));$(this).css({width:f,height:f}),a.draw_overview()}),$("#overview-border div").bind("drag",function(){})},update_viewport_overlay:function(){var a=this.cc,b=this.cv,c=this.oc,d=this.ov,e=a.width(),f=a.height(),g=c.width(),h=c.height(),i=a.position();d.css({left:-(i.left/e*g),top:-(i.top/f*h),width:b.width()/e*g-2,height:b.height()/f*h-2})},draw_overview:function(){var a,b,c,d,e=$("#overview-canvas"),f=e.parent().parent().width(),g=e.get(0).getContext("2d"),h=$("#canvas-container").width(),i=$("#canvas-container").height(),j=this.cv.width(),k=this.cv.height();j>h&&k>i?(c=h/j*f,d=(f-c)/2,a=i/k*f,b=(f-a)/2):i>h?(b=0,a=f,c=Math.ceil(a*h/i),d=(f-c)/2):(c=f,d=0,a=Math.ceil(c*i/h),b=(f-a)/2),e.parent().css({left:d,top:b,width:c,height:a}),e.attr("width",c),e.attr("height",a),$.each(this.app.workflow.nodes,function(b,d){g.fillStyle="#D2C099",g.strokeStyle="#D8B365",g.lineWidth=1;var e=$(d.element),f=e.position(),j=f.left/h*c,k=f.top/i*a,l=e.width()/h*c,m=e.height()/i*a;d.errors?(g.fillStyle="#FFCCCC",g.strokeStyle="#AA6666"):void 0!==d.workflow_outputs&&d.workflow_outputs.length>0&&(g.fillStyle="#E8A92D",g.strokeStyle="#E8A92D"),g.fillRect(j,k,l,m),g.strokeRect(j,k,l,m)}),this.update_viewport_overlay()}}),$.extend(b.prototype,{test:function(a,b){clearTimeout(this.timeout);var c=a.pageX,d=a.pageY,e=$(this.panel),f=e.position(),g=e.width(),h=e.height(),i=e.parent(),j=i.width(),k=i.height(),l=i.offset(),m=l.left,n=l.top,o=m+i.width(),p=n+i.height(),q=-(g-j/2),r=-(h-k/2),s=j/2,t=k/2,u=!1,v=5,w=23;if(m>c-v){if(f.left<s){var x=Math.min(w,s-f.left);e.css("left",f.left+x),u=!0}}else if(c+v>o){if(f.left>q){var x=Math.min(w,f.left-q);e.css("left",f.left-x),u=!0}}else if(n>d-v){if(f.top<t){var x=Math.min(w,t-f.top);e.css("top",f.top+x),u=!0}}else if(d+v>p&&f.top>r){var x=Math.min(w,f.top-q);e.css("top",f.top-x+"px"),u=!0}if(u){b();var e=this;this.timeout=setTimeout(function(){e.test(a,b)},50)}},stop:function(){clearTimeout(this.timeout)}}),a});
|
||||
//# sourceMappingURL=../../../maps/mvc/workflow/workflow-canvas.js.map
|
||||
@@ -0,0 +1,2 @@
|
||||
define(["utils/utils","mvc/form/form-view","mvc/tool/tool-form-base"],function(a,b,c){var d=Backbone.View.extend({initialize:function(a){this.form=new b(a)}}),e=Backbone.View.extend({initialize:function(b){var d=this;this.workflow=b.workflow,this.node=b.node,this.node?(this.post_job_actions=this.node.post_job_actions||{},a.deepeach(b.inputs,function(b){b.type&&(-1!=["data","data_collection"].indexOf(b.type)?(b.type="hidden",b.info="Data input '"+b.name+"' ("+a.textify(b.extensions)+")",b.value={__class__:"RuntimeValue"}):b.fixed||(b.collapsible_value={__class__:"RuntimeValue"},b.is_workflow=b.options&&0==b.options.length||-1!=["integer","float"].indexOf(b.type)))}),a.deepeach(b.inputs,function(a){"conditional"==a.type&&(a.test_param.collapsible_value=void 0)}),this._makeSections(b),this.form=new c(a.merge(b,{text_enable:"Set in Advance",text_disable:"Set at Runtime",narrow:!0,initial_errors:!0,sustain_version:!0,cls:"ui-portlet-narrow",postchange:function(b,c){var e=c.model.attributes,f={tool_id:e.id,tool_version:e.version,type:"tool",inputs:$.extend(!0,{},c.data.create())};Galaxy.emit.debug("tool-form-workflow::postchange()","Sending current state.",f),a.request({type:"POST",url:Galaxy.root+"api/workflows/build_module",data:f,success:function(a){c.update(a.config_form),c.errors(a.config_form),d.node.update_field_data(a),Galaxy.emit.debug("tool-form-workflow::postchange()","Received new model.",a),b.resolve()},error:function(a){Galaxy.emit.debug("tool-form-workflow::postchange()","Refresh request failed.",a),b.reject()}})}}))):Galaxy.emit.debug("tool-form-workflow::initialize()","Node not found in workflow.")},_makeSections:function(a){var b=a.inputs,c=a.datatypes,d=this.node.output_terminals&&Object.keys(this.node.output_terminals)[0];if(d){b.push({name:"pja__"+d+"__EmailAction",label:"Email notification",type:"boolean",value:String(Boolean(this.post_job_actions["EmailAction"+d])),ignore:"false",help:"An email notification will be sent when the job has completed.",payload:{host:window.location.host}}),b.push({name:"pja__"+d+"__DeleteIntermediatesAction",label:"Output cleanup",type:"boolean",value:String(Boolean(this.post_job_actions["DeleteIntermediatesAction"+d])),ignore:"false",help:"Upon completion of this step, delete non-starred outputs from completed workflow steps if they are no longer required as inputs."});for(var e in this.node.output_terminals)b.push(this._makeSection(e,c))}},_makeSection:function(a,b){function c(b,e){e=e||[],e.push(b);for(var f in b.inputs){var g=b.inputs[f],h=g.action;if(h){if(g.name="pja__"+a+"__"+g.action,g.pja_arg&&(g.name+="__"+g.pja_arg),g.payload)for(var i in g.payload){var j=g.payload[i];g.payload[g.name+"__"+i]=j,delete j}var k=d.post_job_actions[g.action+a];if(k){for(var l in e)e[l].expanded=!0;g.value=g.pja_arg?k.action_arguments&&k.action_arguments[g.pja_arg]||g.value:"true"}}g.inputs&&c(g,e.slice(0))}}var d=this,e=[],f=[];for(key in b)e.push({0:b[key],1:b[key]});for(key in this.node.input_terminals)f.push(this.node.input_terminals[key].name);e.sort(function(a,b){return a.label>b.label?1:a.label<b.label?-1:0}),e.unshift({0:"Sequences",1:"Sequences"}),e.unshift({0:"Roadmaps",1:"Roadmaps"}),e.unshift({0:"Leave unchanged",1:"__empty__"});var g={title:"Configure Output: '"+a+"'",type:"section",flat:!0,inputs:[{label:"Label",type:"text",value:(output=this.node.getWorkflowOutput(a))&&output.label||"",help:"This will provide a short name to describe the output - this must be unique across workflows.",onchange:function(b){d.workflow.attemptUpdateOutputLabel(d.node,a,b)}},{action:"RenameDatasetAction",pja_arg:"newname",label:"Rename dataset",type:"text",value:"",ignore:"",help:'This action will rename the output dataset. Click <a href="https://wiki.galaxyproject.org/Learn/AdvancedWorkflow/Variables">here</a> for more information. Valid inputs are: <strong>'+f.join(", ")+"</strong>."},{action:"ChangeDatatypeAction",pja_arg:"newtype",label:"Change datatype",type:"select",ignore:"__empty__",value:"__empty__",options:e,help:"This action will change the datatype of the output to the indicated value."},{action:"TagDatasetAction",pja_arg:"tags",label:"Tags",type:"text",value:"",ignore:"",help:"This action will set tags for the dataset."},{title:"Assign columns",type:"section",flat:!0,inputs:[{action:"ColumnSetAction",pja_arg:"chromCol",label:"Chrom column",type:"integer",value:"",ignore:""},{action:"ColumnSetAction",pja_arg:"startCol",label:"Start column",type:"integer",value:"",ignore:""},{action:"ColumnSetAction",pja_arg:"endCol",label:"End column",type:"integer",value:"",ignore:""},{action:"ColumnSetAction",pja_arg:"strandCol",label:"Strand column",type:"integer",value:"",ignore:""},{action:"ColumnSetAction",pja_arg:"nameCol",label:"Name column",type:"integer",value:"",ignore:""}],help:"This action will set column assignments in the output dataset. Blank fields are ignored."}]};return c(g),g}});return{Default:d,Tool:e}});
|
||||
//# sourceMappingURL=../../../maps/mvc/workflow/workflow-forms.js.map
|
||||
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@@ -1,2 +1,2 @@
|
||||
define(["mvc/workflow/workflow-view-node"],function(a){var b=Backbone.Model.extend({initialize:function(a,b){this.app=a,this.element=b.element,this.input_terminals={},this.output_terminals={},this.tool_errors={},this.workflow_outputs=[]},getWorkflowOutput:function(a){return _.findWhere(this.workflow_outputs,{output_name:a})},isWorkflowOutput:function(a){return void 0!=this.getWorkflowOutput(a)},removeWorkflowOutput:function(a){for(;this.isWorkflowOutput(a);)this.workflow_outputs.splice(this.getWorkflowOutput(a),1)},addWorkflowOutput:function(a,b){if(!this.isWorkflowOutput(a)){var c={output_name:a};return b&&(c.label=b),this.workflow_outputs.push(c),!0}return!1},labelWorkflowOutput:function(a,b){var c=!1,d=null;if(this.isWorkflowOutput(a)){var e=this.getWorkflowOutput(a);d=e.label,e.label=b,c=d!=b}else c=this.addWorkflowOutput(a,b);return c&&(this.app.workflow.updateOutputLabel(d,b),this.markChanged(),this.nodeView.redrawWorkflowOutputs()),c},connectedOutputTerminals:function(){return this._connectedTerminals(this.output_terminals)},_connectedTerminals:function(a){var b=[];return $.each(a,function(a,c){c.connectors.length>0&&b.push(c)}),b},hasConnectedOutputTerminals:function(){var a=this.output_terminals;for(var b in a)if(a[b].connectors.length>0)return!0;return!1},connectedMappedInputTerminals:function(){return this._connectedMappedTerminals(this.input_terminals)},hasConnectedMappedInputTerminals:function(){var a=this.input_terminals;for(var b in a){var c=a[b];if(c.connectors.length>0&&c.isMappedOver())return!0}return!1},_connectedMappedTerminals:function(a){var b=[];return $.each(a,function(a,c){var d=c.mapOver();d.isCollection&&c.connectors.length>0&&b.push(c)}),b},mappedInputTerminals:function(){return this._mappedTerminals(this.input_terminals)},_mappedTerminals:function(a){var b=[];return $.each(a,function(a,c){var d=c.mapOver();d.isCollection&&b.push(c)}),b},hasMappedOverInputTerminals:function(){var a=!1;return _.each(this.input_terminals,function(b){var c=b.mapOver();c.isCollection&&(a=!0)}),a},redraw:function(){$.each(this.input_terminals,function(a,b){b.redraw()}),$.each(this.output_terminals,function(a,b){b.redraw()})},destroy:function(){$.each(this.input_terminals,function(a,b){b.destroy()}),$.each(this.output_terminals,function(a,b){b.destroy()}),this.app.workflow.remove_node(this),$(this.element).remove()},make_active:function(){$(this.element).addClass("toolForm-active")},make_inactive:function(){var a=this.element.get(0);!function(b){b.removeChild(a),b.appendChild(a)}(a.parentNode),$(a).removeClass("toolForm-active")},setLabel:function(a){this.app.workflow.updateNodeLabel(this.label,a),this.label=a||null},init_field_data:function(b){b.type&&(this.type=b.type),this.name=b.name,this.form_html=b.form_html,this.tool_state=b.tool_state,this.tool_errors=b.tool_errors,this.tooltip=b.tooltip?b.tooltip:"",this.annotation=b.annotation,this.post_job_actions=b.post_job_actions?b.post_job_actions:{},this.setLabel(b.label),this.uuid=b.uuid,this.workflow_outputs=b.workflow_outputs?b.workflow_outputs:[];var c=this,d=new a({el:this.element[0],node:c});c.nodeView=d,$.each(b.data_inputs,function(a,b){d.addDataInput(b)}),b.data_inputs.length>0&&b.data_outputs.length>0&&d.addRule(),$.each(b.data_outputs,function(a,b){d.addDataOutput(b)}),d.render(),this.app.workflow.node_changed(this,!0)},update_field_data:function(a){var b=this;if(nodeView=b.nodeView,this.tool_state=a.tool_state,this.form_html=a.form_html,this.tool_errors=a.tool_errors,this.annotation=a.annotation,this.setLabel(a.label),"post_job_actions"in a){var c=$.parseJSON(a.post_job_actions);this.post_job_actions=c?c:{}}b.nodeView.renderToolErrors();var d=nodeView.$("div.inputs"),e=nodeView.newInputsDiv(),f={};_.each(a.data_inputs,function(a){var c=b.nodeView.addDataInput(a,e);f[a.name]=c}),_.each(_.difference(_.values(nodeView.terminalViews),_.values(f)),function(a){a.el.terminal.destroy()}),nodeView.terminalViews=f,b.nodeView.render(),1==a.data_outputs.length&&"collection_type"in a.data_outputs[0]&&nodeView.updateDataOutput(a.data_outputs[0]),d.replaceWith(e),"workflow_outputs"in a&&(this.workflow_outputs=workflow_outputs?workflow_outputs:[]),this.markChanged(),this.redraw()},error:function(a){var b=$(this.element).find(".toolFormBody");b.find("div").remove();var c="<div style='color: red; text-style: italic;'>"+a+"</div>";this.form_html=c,b.html(c),this.app.workflow.node_changed(this)},markChanged:function(){this.app.workflow.node_changed(this)}});return b});
|
||||
define(["mvc/workflow/workflow-view-node"],function(a){var b=Backbone.Model.extend({initialize:function(a,b){this.app=a,this.element=b.element,this.input_terminals={},this.output_terminals={},this.errors={},this.workflow_outputs=[]},getWorkflowOutput:function(a){return _.findWhere(this.workflow_outputs,{output_name:a})},isWorkflowOutput:function(a){return void 0!=this.getWorkflowOutput(a)},removeWorkflowOutput:function(a){for(;this.isWorkflowOutput(a);)this.workflow_outputs.splice(this.getWorkflowOutput(a),1)},addWorkflowOutput:function(a,b){if(!this.isWorkflowOutput(a)){var c={output_name:a};return b&&(c.label=b),this.workflow_outputs.push(c),!0}return!1},labelWorkflowOutput:function(a,b){var c=!1,d=null;if(this.isWorkflowOutput(a)){var e=this.getWorkflowOutput(a);d=e.label,e.label=b,c=d!=b}else c=this.addWorkflowOutput(a,b);return c&&(this.app.workflow.updateOutputLabel(d,b),this.markChanged(),this.nodeView.redrawWorkflowOutputs()),c},connectedOutputTerminals:function(){return this._connectedTerminals(this.output_terminals)},_connectedTerminals:function(a){var b=[];return $.each(a,function(a,c){c.connectors.length>0&&b.push(c)}),b},hasConnectedOutputTerminals:function(){var a=this.output_terminals;for(var b in a)if(a[b].connectors.length>0)return!0;return!1},connectedMappedInputTerminals:function(){return this._connectedMappedTerminals(this.input_terminals)},hasConnectedMappedInputTerminals:function(){var a=this.input_terminals;for(var b in a){var c=a[b];if(c.connectors.length>0&&c.isMappedOver())return!0}return!1},_connectedMappedTerminals:function(a){var b=[];return $.each(a,function(a,c){var d=c.mapOver();d.isCollection&&c.connectors.length>0&&b.push(c)}),b},mappedInputTerminals:function(){return this._mappedTerminals(this.input_terminals)},_mappedTerminals:function(a){var b=[];return $.each(a,function(a,c){var d=c.mapOver();d.isCollection&&b.push(c)}),b},hasMappedOverInputTerminals:function(){var a=!1;return _.each(this.input_terminals,function(b){var c=b.mapOver();c.isCollection&&(a=!0)}),a},redraw:function(){$.each(this.input_terminals,function(a,b){b.redraw()}),$.each(this.output_terminals,function(a,b){b.redraw()})},destroy:function(){$.each(this.input_terminals,function(a,b){b.destroy()}),$.each(this.output_terminals,function(a,b){b.destroy()}),this.app.workflow.remove_node(this),$(this.element).remove()},make_active:function(){$(this.element).addClass("toolForm-active")},make_inactive:function(){var a=this.element.get(0);!function(b){b.removeChild(a),b.appendChild(a)}(a.parentNode),$(a).removeClass("toolForm-active")},init_field_data:function(b){b.type&&(this.type=b.type),this.name=b.name,this.config_form=b.config_form,this.tool_state=b.tool_state,this.errors=b.errors,this.tooltip=b.tooltip?b.tooltip:"",this.annotation=b.annotation,this.post_job_actions=b.post_job_actions?b.post_job_actions:{},this.label=b.label,this.uuid=b.uuid,this.workflow_outputs=b.workflow_outputs?b.workflow_outputs:[];var c=this,d=new a({el:this.element[0],node:c});c.nodeView=d,$.each(b.data_inputs,function(a,b){d.addDataInput(b)}),b.data_inputs.length>0&&b.data_outputs.length>0&&d.addRule(),$.each(b.data_outputs,function(a,b){d.addDataOutput(b)}),d.render(),this.app.workflow.node_changed(this,!0)},update_field_data:function(a){var b=this,c=b.nodeView;if(this.tool_state=a.tool_state,this.config_form=a.config_form,this.errors=a.errors,this.annotation=a.annotation,this.label=a.label,"post_job_actions"in a){var d=a.post_job_actions;this.post_job_actions=d?d:{}}b.nodeView.renderToolErrors();var e=c.$("div.inputs"),f=c.newInputsDiv(),g={};_.each(a.data_inputs,function(a){var c=b.nodeView.addDataInput(a,f);g[a.name]=c}),_.each(_.difference(_.values(c.terminalViews),_.values(g)),function(a){a.el.terminal.destroy()}),c.terminalViews=g,b.nodeView.render(),1==a.data_outputs.length&&"collection_type"in a.data_outputs[0]&&c.updateDataOutput(a.data_outputs[0]),e.replaceWith(f),"workflow_outputs"in a&&(this.workflow_outputs=workflow_outputs?workflow_outputs:[]),this.markChanged(),this.redraw()},error:function(a){var b=$(this.element).find(".toolFormBody");b.find("div").remove();var c="<div style='color: red; text-style: italic;'>"+a+"</div>";this.config_form=c,b.html(c),this.app.workflow.node_changed(this)},markChanged:function(){this.app.workflow.node_changed(this)}});return b});
|
||||
//# sourceMappingURL=../../../maps/mvc/workflow/workflow-node.js.map
|
||||
@@ -1,2 +1,2 @@
|
||||
define(["libs/underscore","mvc/workflow/workflow-view-terminals","mvc/workflow/workflow-view-data"],function(a,b,c){return Backbone.View.extend({initialize:function(a){this.node=a.node,this.output_width=Math.max(150,this.$el.width()),this.tool_body=this.$el.find(".toolFormBody"),this.tool_body.find("div").remove(),this.newInputsDiv().appendTo(this.tool_body),this.terminalViews={},this.outputViews={}},render:function(){this.renderToolLabel(),this.renderToolErrors(),this.$el.css("width",Math.min(250,Math.max(this.$el.width(),this.output_width)))},renderToolLabel:function(){this.$(".nodeTitle").text(this.node.label||this.node.name)},renderToolErrors:function(){this.node.tool_errors?this.$el.addClass("tool-node-error"):this.$el.removeClass("tool-node-error")},newInputsDiv:function(){return $("<div/>").addClass("inputs")},updateMaxWidth:function(a){this.output_width=Math.max(this.output_width,a)},addRule:function(){this.tool_body.append($("<div/>").addClass("rule"))},addDataInput:function(a,d){var e=!0;d||(d=this.$(".inputs"),e=!1);var f=this.terminalViews[a.name],g="dataset_collection"==a.input_type?b.InputCollectionTerminalView:b.InputTerminalView;if(!f||f instanceof g||(f.el.terminal.destroy(),f=null),f){var h=f.el.terminal;h.update(a),h.destroyInvalidConnections()}else f=new g({node:this.node,input:a});this.terminalViews[a.name]=f;var i=f.el,j=new c.DataInputView({terminalElement:i,input:a,nodeView:this,skipResize:e}),k=j.$el;return d.append(k.prepend(f.terminalElements())),f},addDataOutput:function(a){var d=a.collection?b.OutputCollectionTerminalView:b.OutputTerminalView,e=new d({node:this.node,output:a}),f=new c.DataOutputView({output:a,terminalElement:e.el,nodeView:this});this.outputViews[a.name]=f,this.tool_body.append(f.$el.append(e.terminalElements()))},redrawWorkflowOutputs:function(){a.each(this.outputViews,function(a){a.redrawWorkflowOutput()})},updateDataOutput:function(a){var b=this.node.output_terminals[a.name];b.update(a)}})});
|
||||
define(["libs/underscore","mvc/workflow/workflow-view-terminals","mvc/workflow/workflow-view-data"],function(a,b,c){return Backbone.View.extend({initialize:function(a){this.node=a.node,this.output_width=Math.max(150,this.$el.width()),this.tool_body=this.$el.find(".toolFormBody"),this.tool_body.find("div").remove(),this.newInputsDiv().appendTo(this.tool_body),this.terminalViews={},this.outputViews={}},render:function(){this.renderToolLabel(),this.renderToolErrors(),this.$el.css("width",Math.min(250,Math.max(this.$el.width(),this.output_width)))},renderToolLabel:function(){this.$(".nodeTitle").text(this.node.label||this.node.name)},renderToolErrors:function(){this.node.errors?this.$el.addClass("tool-node-error"):this.$el.removeClass("tool-node-error")},newInputsDiv:function(){return $("<div/>").addClass("inputs")},updateMaxWidth:function(a){this.output_width=Math.max(this.output_width,a)},addRule:function(){this.tool_body.append($("<div/>").addClass("rule"))},addDataInput:function(a,d){var e=!0;d||(d=this.$(".inputs"),e=!1);var f=this.terminalViews[a.name],g="dataset_collection"==a.input_type?b.InputCollectionTerminalView:b.InputTerminalView;if(!f||f instanceof g||(f.el.terminal.destroy(),f=null),f){var h=f.el.terminal;h.update(a),h.destroyInvalidConnections()}else f=new g({node:this.node,input:a});this.terminalViews[a.name]=f;var i=f.el,j=new c.DataInputView({terminalElement:i,input:a,nodeView:this,skipResize:e}),k=j.$el;return d.append(k.prepend(f.terminalElements())),f},addDataOutput:function(a){var d=a.collection?b.OutputCollectionTerminalView:b.OutputTerminalView,e=new d({node:this.node,output:a}),f=new c.DataOutputView({output:a,terminalElement:e.el,nodeView:this});this.outputViews[a.name]=f,this.tool_body.append(f.$el.append(e.terminalElements()))},redrawWorkflowOutputs:function(){a.each(this.outputViews,function(a){a.redrawWorkflowOutput()})},updateDataOutput:function(a){var b=this.node.output_terminals[a.name];b.update(a)}})});
|
||||
//# sourceMappingURL=../../../maps/mvc/workflow/workflow-view-node.js.map
|
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@@ -1,2 +1,2 @@
|
||||
!function(a){"function"==typeof define&&define.amd?define(["jquery"],a):a(jQuery)}(function(a){"use_strict";function b(a,b){c(a).find(".tag-name").each(function(){c(this).click(function(){var a=c(this).text(),d=a.split(":");return b(d[0],d[1]),!0})})}var c=a;return a.fn.autocomplete_tagging=function(d){function e(a){c(a).mouseenter(function(){c(this).attr("src",h.delete_tag_img_rollover)}),c(a).mouseleave(function(){c(this).attr("src",h.delete_tag_img)}),c(a).click(function(){var b=c(this).parent(),d=b.find(".tag-name").eq(0),e=d.text(),f=e.split(":"),g=f[0],i=f[1],l=b.prev();b.remove(),delete h.tags[g];var m=h.get_toggle_link_text_fn(h.tags);return k.text(m),c.ajax({url:h.ajax_delete_tag_url,data:{tag_name:g},error:function(){h.tags[g]=i,l.hasClass("tag-button")?l.after(b):j.prepend(b),alert("Remove tag failed"),k.text(h.get_toggle_link_text_fn(h.tags)),a.mouseenter(function(){c(this).attr("src",h.delete_tag_img_rollover)}),a.mouseleave(function(){c(this).attr("src",h.delete_tag_img)})},success:function(){}}),!0})}function f(a){var b=c("<img/>").attr("src",h.delete_tag_img).addClass("delete-tag-img");e(b);var d=c("<span>").text(a).addClass("tag-name");d.click(function(){var b=a.split(":");return h.tag_click_fn(b[0],b[1]),!0});var f=c("<span></span>").addClass("tag-button");return f.append(d),h.editable&&f.append(b),f}var g={get_toggle_link_text_fn:function(a){var b="",c=_.size(a);return b=c>0?c+(c>1?" Tags":" Tag"):"Add tags"},tag_click_fn:function(){},editable:!0,input_size:20,in_form:!1,tags:{},use_toggle_link:!0,item_id:"",add_tag_img:"",add_tag_img_rollover:"",delete_tag_img:"",ajax_autocomplete_tag_url:"",ajax_retag_url:"",ajax_delete_tag_url:"",ajax_add_tag_url:""},h=a.extend(g,d),i=c(this),j=i.find(".tag-area"),k=i.find(".toggle-link"),l=i.find(".tag-input"),m=i.find(".add-tag-button");k.click(function(){var a;return a=j.is(":hidden")?function(){var a=c(this).find(".tag-button").length;0===a&&j.click()}:function(){j.blur()},j.slideToggle("fast",a),c(this)}),h.editable&&l.hide(),l.keyup(function(a){if(27===a.keyCode)c(this).trigger("blur");else if(13===a.keyCode||188===a.keyCode||32===a.keyCode){var b=this.value;if(-1!==b.indexOf(": ",b.length-2))return this.value=b.substring(0,b.length-1),!1;if((188===a.keyCode||32===a.keyCode)&&(b=b.substring(0,b.length-1)),b=c.trim(b),b.length<2)return!1;this.value="";var d=f(b),e=j.children(".tag-button");if(0!==e.length){var g=e.slice(e.length-1);g.after(d)}else j.prepend(d);var i=b.split(":");h.tags[i[0]]=i[1];var l=h.get_toggle_link_text_fn(h.tags);k.text(l);var m=c(this);return c.ajax({url:h.ajax_add_tag_url,data:{new_tag:b},error:function(){d.remove(),delete h.tags[i[0]];var a=h.get_toggle_link_text_fn(h.tags);k.text(a),alert("Add tag failed")},success:function(){m.data("autocompleter").cacheFlush()}}),!1}});var n=function(a,b,c,d){var e=d.split(":");return 1===e.length?e[0]:e[1]},o={selectFirst:!1,formatItem:n,autoFill:!1,highlight:!1};l.autocomplete(h.ajax_autocomplete_tag_url,o),i.find(".delete-tag-img").each(function(){e(c(this))}),b(c(this),h.tag_click_fn),m.click(function(){return c(this).hide(),j.click(),!1}),h.editable&&(j.bind("blur",function(){_.size(h.tags)>0&&(m.show(),l.hide(),j.removeClass("active-tag-area"))}),j.click(function(a){var b=c(this).hasClass("active-tag-area");if(c(a.target).hasClass("delete-tag-img")&&!b)return!1;if(c(a.target).hasClass("tag-name")&&!b)return!1;c(this).addClass("active-tag-area"),m.hide(),l.show(),l.focus();var d=function(a){var b=function(a,b){a.attr("id");b!==a&&(a.blur(),c(window).unbind("click.tagging_blur"),c(this).addClass("tooltip"))};b(j,c(a.target))};return c(window).bind("click.tagging_blur",d),!1})),h.use_toggle_link&&j.hide()},b});
|
||||
!function(a){"function"==typeof define&&define.amd?define(["jquery"],a):a(jQuery)}(function(a){"use_strict";function b(a,b){c(a).find(".tag-name").each(function(){c(this).click(function(){var a=c(this).text(),d=a.split(":");return b(d[0],d[1]),!0})})}var c=a;return a.fn.autocomplete_tagging=function(d){function e(a){c(a).mouseenter(function(){c(this).attr("src",h.delete_tag_img_rollover)}),c(a).mouseleave(function(){c(this).attr("src",h.delete_tag_img)}),c(a).click(function(){var b=c(this).parent(),d=b.find(".tag-name").eq(0),e=d.text(),f=e.split(":"),g=f[0],i=f[1],l=b.prev();b.remove(),delete h.tags[g];var m=h.get_toggle_link_text_fn(h.tags);return k.text(m),c.ajax({url:h.ajax_delete_tag_url,data:{tag_name:g},error:function(){h.tags[g]=i,l.hasClass("tag-button")?l.after(b):j.prepend(b),alert("Remove tag failed"),k.text(h.get_toggle_link_text_fn(h.tags)),a.mouseenter(function(){c(this).attr("src",h.delete_tag_img_rollover)}),a.mouseleave(function(){c(this).attr("src",h.delete_tag_img)})},success:function(){}}),!0})}function f(a){var b=c("<img/>").attr("src",h.delete_tag_img).addClass("delete-tag-img");e(b);var d=c("<span>").text(a).addClass("tag-name");d.click(function(){var b=a.split(":");return h.tag_click_fn(b[0],b[1]),!0});var f=c("<span></span>").addClass("tag-button");return f.append(d),h.editable&&f.append(b),f}var g={get_toggle_link_text_fn:function(a){var b="",c=_.size(a);return b=c>0?c+(c>1?" Tags":" Tag"):"Add tags"},tag_click_fn:function(){},editable:!0,input_size:20,in_form:!1,tags:{},use_toggle_link:!0,item_id:"",add_tag_img:"",add_tag_img_rollover:"",delete_tag_img:"",ajax_autocomplete_tag_url:"",ajax_retag_url:"",ajax_delete_tag_url:"",ajax_add_tag_url:""},h=a.extend(g,d),i=c(this),j=i.find(".tag-area"),k=i.find(".toggle-link"),l=i.find(".tag-input"),m=i.find(".add-tag-button");k.click(function(){var a;return a=j.is(":hidden")?function(){var a=c(this).find(".tag-button").length;0===a&&j.click()}:function(){j.blur()},j.slideToggle("fast",a),c(this)}),h.editable&&l.hide(),l.keyup(function(a){if(27===a.keyCode)c(this).trigger("blur");else if(13===a.keyCode||188===a.keyCode||32===a.keyCode){var b=this.value;if(-1!==b.indexOf(": ",b.length-2))return this.value=b.substring(0,b.length-1),!1;if((188===a.keyCode||32===a.keyCode)&&(b=b.substring(0,b.length-1)),b=c.trim(b),b.length<2)return!1;this.value="";var d=f(b),e=j.children(".tag-button");if(0!==e.length){var g=e.slice(e.length-1);g.after(d)}else j.prepend(d);var i=b.split(":");h.tags[i[0]]=i[1];var l=h.get_toggle_link_text_fn(h.tags);k.text(l);var m=c(this);return c.ajax({url:h.ajax_add_tag_url,data:{new_tag:b},error:function(){d.remove(),delete h.tags[i[0]];var a=h.get_toggle_link_text_fn(h.tags);k.text(a),alert("Add tag failed")},success:function(){m.data("autocompleter").cacheFlush()}}),!1}});var n=function(a,b,c,d){var e=d.split(":");return 1===e.length?e[0]:e[1]},o={selectFirst:!1,formatItem:n,autoFill:!1,highlight:!1};l.autocomplete_verheul(h.ajax_autocomplete_tag_url,o),i.find(".delete-tag-img").each(function(){e(c(this))}),b(c(this),h.tag_click_fn),m.click(function(){return c(this).hide(),j.click(),!1}),h.editable&&(j.bind("blur",function(){_.size(h.tags)>0&&(m.show(),l.hide(),j.removeClass("active-tag-area"))}),j.click(function(a){var b=c(this).hasClass("active-tag-area");if(c(a.target).hasClass("delete-tag-img")&&!b)return!1;if(c(a.target).hasClass("tag-name")&&!b)return!1;c(this).addClass("active-tag-area"),m.hide(),l.show(),l.focus();var d=function(a){var b=function(a,b){a.attr("id");b!==a&&(a.blur(),c(window).unbind("click.tagging_blur"),c(this).addClass("tooltip"))};b(j,c(a.target))};return c(window).bind("click.tagging_blur",d),!1})),h.use_toggle_link&&j.hide()},b});
|
||||
//# sourceMappingURL=../../maps/ui/autocom_tagging.js.map
|
||||
File diff suppressed because one or more lines are too long
Reference in New Issue
Block a user