From 07eb322e8c06e91095fe418c0d71bf725b682db5 Mon Sep 17 00:00:00 2001 From: John Chilton Date: Wed, 30 Mar 2016 20:26:33 -0400 Subject: [PATCH] Fix Pulsar effective working directory for #1688. --- lib/galaxy/jobs/runners/pulsar.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/lib/galaxy/jobs/runners/pulsar.py b/lib/galaxy/jobs/runners/pulsar.py index b52a777c79f..1eb56e59ba1 100644 --- a/lib/galaxy/jobs/runners/pulsar.py +++ b/lib/galaxy/jobs/runners/pulsar.py @@ -217,7 +217,7 @@ class PulsarJobRunner( AsynchronousJobRunner ): command_line=command_line, input_files=self.get_input_files(job_wrapper), client_outputs=self.__client_outputs(client, job_wrapper), - working_directory=job_wrapper.working_directory, + working_directory=job_wrapper.tool_working_directory, tool=job_wrapper.tool, config_files=job_wrapper.extra_filenames, dependencies_description=dependencies_description,