From d91ad7d6275cf004b670a11a23a6258e51500c89 Mon Sep 17 00:00:00 2001
From: M Bernt <m.bernt@ufz.de>
Date: Thu, 12 Jul 2018 13:02:28 +0200
Subject: [PATCH 1/3] small improvement to the too xsd docs

---
 lib/galaxy/tools/xsd/galaxy.xsd | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/lib/galaxy/tools/xsd/galaxy.xsd b/lib/galaxy/tools/xsd/galaxy.xsd
index 582172f6ad7..fd3f2a256b6 100644
--- a/lib/galaxy/tools/xsd/galaxy.xsd
+++ b/lib/galaxy/tools/xsd/galaxy.xsd
@@ -1358,6 +1358,8 @@ provides a demonstration of using this tag.
 </test>
 ```
 
+Note that this tool uses `assign_primary_output="true"` for `<discover_data_sets>`. Hence, the content of the first  discovered data set (which is the first in the alphabetically sorted list of discovered designations) is checked directly in the `<output>` tag of the test. 
+
 ]]></xs:documentation>
     </xs:annotation>
     <xs:complexContent>

From cabd6a11bed38eaa69175a8505c4f6071478bd5f Mon Sep 17 00:00:00 2001
From: M Bernt <m.bernt@ufz.de>
Date: Thu, 12 Jul 2018 13:40:02 +0200
Subject: [PATCH 2/3] added <output> to snippet

---
 lib/galaxy/tools/xsd/galaxy.xsd | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/lib/galaxy/tools/xsd/galaxy.xsd b/lib/galaxy/tools/xsd/galaxy.xsd
index fd3f2a256b6..44a2ac127e5 100644
--- a/lib/galaxy/tools/xsd/galaxy.xsd
+++ b/lib/galaxy/tools/xsd/galaxy.xsd
@@ -1340,6 +1340,11 @@ The functional test tool
 provides a demonstration of using this tag.
 
 ```xml
+<outputs>
+    <data format="tabular" name="sample">
+      <discover_datasets pattern="(?P&lt;designation&gt;.+)\.report\.tsv" ext="tabular" visible="true" assign_primary_output="true" />
+    </data>
+</outputs>
 <test>
   <param name="num_param" value="7" />
   <param name="input" ftype="txt" value="simple_line.txt"/>

From 5bac0eff82d5fa4931834082baeb220c701fd5b5 Mon Sep 17 00:00:00 2001
From: Nicola Soranzo <nicola.soranzo@gmail.com>
Date: Thu, 12 Jul 2018 14:43:32 +0100
Subject: [PATCH 3/3] Update galaxy.xsd

---
 lib/galaxy/tools/xsd/galaxy.xsd | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/lib/galaxy/tools/xsd/galaxy.xsd b/lib/galaxy/tools/xsd/galaxy.xsd
index 44a2ac127e5..189955c6bcb 100644
--- a/lib/galaxy/tools/xsd/galaxy.xsd
+++ b/lib/galaxy/tools/xsd/galaxy.xsd
@@ -1363,8 +1363,7 @@ provides a demonstration of using this tag.
 </test>
 ```
 
-Note that this tool uses `assign_primary_output="true"` for `<discover_data_sets>`. Hence, the content of the first  discovered data set (which is the first in the alphabetically sorted list of discovered designations) is checked directly in the `<output>` tag of the test. 
-
+Note that this tool uses ``assign_primary_output="true"`` for ``<discover_data_sets>``. Hence, the content of the first discovered dataset (which is the first in the alphabetically sorted list of discovered designations) is checked directly in the ``<output>`` tag of the test.
 ]]></xs:documentation>
     </xs:annotation>
     <xs:complexContent>