diff --git a/lib/galaxy/datatypes/registry.py b/lib/galaxy/datatypes/registry.py index 8ccea6c30d7..f130e18bb9f 100644 --- a/lib/galaxy/datatypes/registry.py +++ b/lib/galaxy/datatypes/registry.py @@ -46,7 +46,8 @@ class Registry( object ): 'laj' : images.Laj(), 'lav' : sequence.Lav(), 'html' : images.Html(), - 'customtrack' : interval.CustomTrack() + 'customtrack' : interval.CustomTrack(), + 'gbrowsetrack' : interval.GBrowseTrack() } self.mimetypes_by_extension = { 'data' : 'application/octet-stream', @@ -66,7 +67,8 @@ class Registry( object ): 'laj' : 'text/plain', 'lav' : 'text/plain', 'html' : 'text/html', - 'customtrack' : 'text/plain' + 'customtrack' : 'text/plain', + 'gbrowsetrack' : 'text/plain' } def get_mimetype_by_extension(self, ext ): diff --git a/static/ucsc/builds.txt b/static/ucsc/builds.txt index d5d696e5f5c..839a2aad072 100644 --- a/static/ucsc/builds.txt +++ b/static/ucsc/builds.txt @@ -94,3 +94,35 @@ vibrVuln_YJ016_1 Vibrio vulnificus YJ016 12/06/2003 (vibrVuln_YJ016_1) heliHepa1 Helicobacter hepaticus 06/18/2003 (heliHepa1) heliPylo_26695_1 Helicobacter pylori 26695 08/07/1997 (heliPylo_26695_1) heliPylo_J99_1 Helicobacter pylori J99 01/29/1999 (heliPylo_J99_1) +# +#Harvested from http://www.wormbase.org/db/seq/gbrowse/wormbase/ +# +brugia Brugia malayi (current release) +briggsae_cb25 C. briggsae (cb25.agp8 release; 2003) +briggsae C. briggsae (current release) +elegans C. elegans (current release) +elegans_gmap C. elegans (genetic map) +elegans_pmap C. elegans (physical map) +nGASP C. elegans WS160 Gene Prediction Assessment Browser +ws77 C. elegans WS77 gene predictions +remanei C. remanei (preliminary analysis) +fly D. melanogaster (via Gadfly Release 2) +fly31 D. melanogaster (via Gadfly Release 3.1) +nGASP_submissions nGASP WS160 Phase 1 Gene Predictions +yeast_chr1 S. cerevisiae chromosome I +# +#Harvested from http://flybase.bio.indiana.edu/cgi-bin/gbrowse/dmel/ +# +dana D. ananassae Genome +dere D. erecta Genome +dgri D. grimshawi Genome +dmel D. melanogaster Genome (R5.1) +dmoj D. mojavensis Genome +dper D. persimilis Genome +dpse D. pseudoobscura Genome (R2.0) +dsec D. sechellia Genome +dsim D. simulans Genome +dvir D. virilis Genome +dwil D. willistoni Genome +dyak D. yakuba Genome +dmelstocks Insertions in Stock Collections